Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TPM4P67936 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TPM4P67936 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TPM4P67936 RNA5SP130-201ENST00000364431 114 ntBASIC4.13□□□□□ -1.75
TPM4P67936 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.13□□□□□ -1.75
TPM4P67936 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC4.13□□□□□ -1.75
TPM4P67936 AL390879.2-203ENST00000426943 1121 ntBASIC4.13□□□□□ -1.75
TPM4P67936 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.13□□□□□ -1.75
TPM4P67936 AC068287.1-201ENST00000430283 295 ntBASIC4.13□□□□□ -1.75
TPM4P67936 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TPM4P67936 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.13□□□□□ -1.75
TPM4P67936 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.13□□□□□ -1.75
TPM4P67936 MTCYBP14-201ENST00000457471 715 ntBASIC4.13□□□□□ -1.75
TPM4P67936 AC087385.1-201ENST00000475062 312 ntBASIC4.13□□□□□ -1.75
TPM4P67936 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TPM4P67936 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.13□□□□□ -1.75
TPM4P67936 PCBP2P3-201ENST00000509726 843 ntBASIC4.13□□□□□ -1.75
TPM4P67936 RNA5SP309-201ENST00000516670 106 ntBASIC4.13□□□□□ -1.75
TPM4P67936 AP000926.4-201ENST00000527351 454 ntBASIC4.13□□□□□ -1.75
TPM4P67936 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.13□□□□□ -1.75
TPM4P67936 TGIF1P1-201ENST00000558095 802 ntBASIC4.13□□□□□ -1.75
TPM4P67936 AC027281.1-201ENST00000574178 758 ntBASIC4.13□□□□□ -1.75
TPM4P67936 MIR4277-201ENST00000578298 84 ntBASIC4.13□□□□□ -1.75
TPM4P67936 AC010680.4-201ENST00000605334 543 ntBASIC4.13□□□□□ -1.75
TPM4P67936 AC092628.2-201ENST00000622492 339 ntBASIC4.13□□□□□ -1.75
TPM4P67936 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.13□□□□□ -1.75
TPM4P67936 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TPM4P67936 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.13□□□□□ -1.75
TPM4P67936 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.12□□□□□ -1.75
TPM4P67936 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
TPM4P67936 U3.22-201ENST00000391120 215 ntBASIC4.12□□□□□ -1.75
TPM4P67936 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.12□□□□□ -1.75
TPM4P67936 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.12□□□□□ -1.75
TPM4P67936 RPL17P36-201ENST00000420302 549 ntBASIC4.12□□□□□ -1.75
TPM4P67936 AC007394.1-201ENST00000421941 531 ntBASIC4.12□□□□□ -1.75
TPM4P67936 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.12□□□□□ -1.75
TPM4P67936 NDUFB1P1-201ENST00000435191 180 ntBASIC4.12□□□□□ -1.75
TPM4P67936 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TPM4P67936 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.12□□□□□ -1.75
TPM4P67936 CYCSP53-201ENST00000455540 265 ntBASIC4.12□□□□□ -1.75
TPM4P67936 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.12□□□□□ -1.75
TPM4P67936 HMGB3P14-201ENST00000494195 599 ntBASIC4.12□□□□□ -1.75
TPM4P67936 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC4.12□□□□□ -1.75
TPM4P67936 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC4.12□□□□□ -1.75
TPM4P67936 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC4.12□□□□□ -1.75
TPM4P67936 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.12□□□□□ -1.75
TPM4P67936 NPM1P45-201ENST00000583151 559 ntBASIC4.12□□□□□ -1.75
TPM4P67936 IGKV1OR2-6-201ENST00000603485 277 ntBASIC4.12□□□□□ -1.75
TPM4P67936 AL592436.1-201ENST00000605135 558 ntBASIC4.12□□□□□ -1.75
TPM4P67936 AC024940.4-201ENST00000605507 246 ntBASIC4.12□□□□□ -1.75
TPM4P67936 AL450489.1-201ENST00000612071 468 ntBASIC4.12□□□□□ -1.75
TPM4P67936 AC079684.1-201ENST00000621405 437 ntBASIC4.12□□□□□ -1.75
TPM4P67936 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.12□□□□□ -1.75
TPM4P67936 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.12□□□□□ -1.75
TPM4P67936 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.12□□□□□ -1.75
TPM4P67936 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
TPM4P67936 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TPM4P67936 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TPM4P67936 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
TPM4P67936 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
TPM4P67936 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TPM4P67936 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TPM4P67936 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
TPM4P67936 CYB5AP4-201ENST00000396692 399 ntBASIC4.11□□□□□ -1.75
TPM4P67936 RBMY2KP-201ENST00000418221 992 ntBASIC4.11□□□□□ -1.75
TPM4P67936 OSTCP5-201ENST00000425293 453 ntBASIC4.11□□□□□ -1.75
TPM4P67936 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.11□□□□□ -1.75
TPM4P67936 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.11□□□□□ -1.75
TPM4P67936 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TPM4P67936 TRBV8-2-201ENST00000475637 270 ntBASIC4.11□□□□□ -1.75
TPM4P67936 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.11□□□□□ -1.75
TPM4P67936 AC137768.1-201ENST00000549998 553 ntBASIC4.11□□□□□ -1.75
TPM4P67936 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.11□□□□□ -1.75
TPM4P67936 MIR5096-201ENST00000583713 70 ntBASIC4.11□□□□□ -1.75
TPM4P67936 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.11□□□□□ -1.75
TPM4P67936 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.11□□□□□ -1.75
TPM4P67936 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.11□□□□□ -1.75
TPM4P67936 RMST_5.1-201ENST00000618704 126 ntBASIC4.11□□□□□ -1.75
TPM4P67936 AP000346.3-201ENST00000622821 210 ntBASIC4.11□□□□□ -1.75
TPM4P67936 C2orf27A-204ENST00000623058 969 ntBASIC4.11□□□□□ -1.75
TPM4P67936 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.11□□□□□ -1.75
TPM4P67936 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TPM4P67936 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
TPM4P67936 AC138393.1-206ENST00000540997 1886 ntBASIC4.11□□□□□ -1.75
TPM4P67936 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
TPM4P67936 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
TPM4P67936 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
TPM4P67936 RFX3-203ENST00000381984 364 ntTSL 3 BASIC4.1□□□□□ -1.75
TPM4P67936 OR6C69P-201ENST00000394268 893 ntBASIC4.1□□□□□ -1.75
TPM4P67936 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.1□□□□□ -1.75
TPM4P67936 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.1□□□□□ -1.75
TPM4P67936 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.1□□□□□ -1.75
TPM4P67936 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC4.1□□□□□ -1.75
TPM4P67936 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.1□□□□□ -1.75
TPM4P67936 AL592293.2-201ENST00000422292 996 ntBASIC4.1□□□□□ -1.75
TPM4P67936 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.1□□□□□ -1.75
TPM4P67936 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.1□□□□□ -1.75
TPM4P67936 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.1□□□□□ -1.75
TPM4P67936 EIF2S2P2-201ENST00000447161 982 ntBASIC4.1□□□□□ -1.75
TPM4P67936 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms