Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC3.09□□□□□ -1.91
LSM3P62310 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.09□□□□□ -1.91
LSM3P62310 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.09□□□□□ -1.91
LSM3P62310 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC3.09□□□□□ -1.91
LSM3P62310 RAB9AP5-201ENST00000437794 597 ntBASIC3.09□□□□□ -1.91
LSM3P62310 RAB9AP2-201ENST00000443911 597 ntBASIC3.09□□□□□ -1.91
LSM3P62310 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC3.09□□□□□ -1.91
LSM3P62310 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.09□□□□□ -1.91
LSM3P62310 CLIC4P1-201ENST00000453177 535 ntBASIC3.09□□□□□ -1.91
LSM3P62310 AC007967.1-201ENST00000455422 1159 ntBASIC3.09□□□□□ -1.91
LSM3P62310 RN7SL594P-201ENST00000470590 287 ntBASIC3.09□□□□□ -1.91
LSM3P62310 AC006463.2-201ENST00000473326 348 ntBASIC3.09□□□□□ -1.91
LSM3P62310 RN7SL283P-201ENST00000489055 303 ntBASIC3.09□□□□□ -1.91
LSM3P62310 AC092185.1-201ENST00000491371 97 ntBASIC3.09□□□□□ -1.91
LSM3P62310 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC3.09□□□□□ -1.91
LSM3P62310 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.09□□□□□ -1.91
LSM3P62310 RNU1-143P-201ENST00000516296 146 ntBASIC3.09□□□□□ -1.91
LSM3P62310 SCARNA14-201ENST00000516903 136 ntBASIC3.09□□□□□ -1.91
LSM3P62310 RNU6-352P-201ENST00000516908 107 ntBASIC3.09□□□□□ -1.91
LSM3P62310 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.09□□□□□ -1.91
LSM3P62310 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC3.09□□□□□ -1.91
LSM3P62310 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC3.09□□□□□ -1.91
LSM3P62310 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.09□□□□□ -1.91
LSM3P62310 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.09□□□□□ -1.91
LSM3P62310 TRAV37-201ENST00000553906 342 ntBASIC3.09□□□□□ -1.91
LSM3P62310 AC006254.3-201ENST00000603353 884 ntBASIC3.09□□□□□ -1.91
LSM3P62310 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.09□□□□□ -1.91
LSM3P62310 AC103710.3-201ENST00000608157 948 ntBASIC3.09□□□□□ -1.91
LSM3P62310 U1.23-201ENST00000610293 146 ntBASIC3.09□□□□□ -1.91
LSM3P62310 RNU1-68P-201ENST00000615382 146 ntBASIC3.09□□□□□ -1.91
LSM3P62310 MIR7155-201ENST00000615925 56 ntBASIC3.09□□□□□ -1.91
LSM3P62310 U1.39-201ENST00000621562 146 ntBASIC3.09□□□□□ -1.91
LSM3P62310 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.92
LSM3P62310 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.09□□□□□ -1.92
LSM3P62310 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.09□□□□□ -1.92
LSM3P62310 AC107081.3-201ENST00000612715 2034 ntBASIC3.09□□□□□ -1.92
LSM3P62310 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.08□□□□□ -1.92
LSM3P62310 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.08□□□□□ -1.92
LSM3P62310 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
LSM3P62310 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
LSM3P62310 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.08□□□□□ -1.92
LSM3P62310 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
LSM3P62310 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
LSM3P62310 SNORA62.2-201ENST00000364672 152 ntBASIC3.08□□□□□ -1.92
LSM3P62310 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
LSM3P62310 AL035419.1-201ENST00000397037 564 ntBASIC3.08□□□□□ -1.92
LSM3P62310 RPL7P60-201ENST00000397636 735 ntBASIC3.08□□□□□ -1.92
LSM3P62310 RNA5SP44-201ENST00000410446 133 ntBASIC3.08□□□□□ -1.92
LSM3P62310 ELOCP19-201ENST00000411919 318 ntBASIC3.08□□□□□ -1.92
LSM3P62310 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.08□□□□□ -1.92
LSM3P62310 PTP4A1P5-201ENST00000420305 455 ntBASIC3.08□□□□□ -1.92
LSM3P62310 AC012498.1-201ENST00000424037 437 ntBASIC3.08□□□□□ -1.92
LSM3P62310 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC3.08□□□□□ -1.92
LSM3P62310 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.08□□□□□ -1.92
LSM3P62310 PPIAP20-201ENST00000449839 135 ntBASIC3.08□□□□□ -1.92
LSM3P62310 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.08□□□□□ -1.92
LSM3P62310 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.08□□□□□ -1.92
LSM3P62310 AL645939.1-201ENST00000453429 797 ntBASIC3.08□□□□□ -1.92
LSM3P62310 RPL23AP67-201ENST00000465341 474 ntBASIC3.08□□□□□ -1.92
LSM3P62310 AC006511.1-201ENST00000470614 315 ntBASIC3.08□□□□□ -1.92
LSM3P62310 RNA5SP380-201ENST00000517190 98 ntBASIC3.08□□□□□ -1.92
LSM3P62310 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC3.08□□□□□ -1.92
LSM3P62310 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.08□□□□□ -1.92
LSM3P62310 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC3.08□□□□□ -1.92
LSM3P62310 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.08□□□□□ -1.92
LSM3P62310 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.08□□□□□ -1.92
LSM3P62310 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.08□□□□□ -1.92
LSM3P62310 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC3.08□□□□□ -1.92
LSM3P62310 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.08□□□□□ -1.92
LSM3P62310 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC3.08□□□□□ -1.92
LSM3P62310 AC090953.1-201ENST00000604305 1092 ntBASIC3.08□□□□□ -1.92
LSM3P62310 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
LSM3P62310 MIR6500-201ENST00000622700 86 ntBASIC3.08□□□□□ -1.92
LSM3P62310 AC112200.1-201ENST00000625015 234 ntBASIC3.08□□□□□ -1.92
LSM3P62310 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
LSM3P62310 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
LSM3P62310 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.08□□□□□ -1.92
LSM3P62310 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
LSM3P62310 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
LSM3P62310 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
LSM3P62310 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.07□□□□□ -1.92
LSM3P62310 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
LSM3P62310 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
LSM3P62310 FRG1CP-201ENST00000358464 769 ntBASIC3.07□□□□□ -1.92
LSM3P62310 RNA5SP435-201ENST00000364044 108 ntBASIC3.07□□□□□ -1.92
LSM3P62310 U3.11-201ENST00000364476 212 ntBASIC3.07□□□□□ -1.92
LSM3P62310 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
LSM3P62310 OR13C3-201ENST00000374781 1108 ntBASIC3.07□□□□□ -1.92
LSM3P62310 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
LSM3P62310 RNU6-146P-201ENST00000384602 108 ntBASIC3.07□□□□□ -1.92
LSM3P62310 RPL21P3-201ENST00000395517 478 ntBASIC3.07□□□□□ -1.92
LSM3P62310 AL133270.1-201ENST00000402635 279 ntBASIC3.07□□□□□ -1.92
LSM3P62310 RN7SKP53-201ENST00000411337 315 ntBASIC3.07□□□□□ -1.92
LSM3P62310 AC245054.1-201ENST00000420944 258 ntBASIC3.07□□□□□ -1.92
LSM3P62310 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC3.07□□□□□ -1.92
LSM3P62310 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
LSM3P62310 AC097262.1-201ENST00000452559 548 ntBASIC3.07□□□□□ -1.92
LSM3P62310 RPL7AP52-201ENST00000458096 790 ntBASIC3.07□□□□□ -1.92
LSM3P62310 AC146507.2-201ENST00000460608 476 ntBASIC3.07□□□□□ -1.92
LSM3P62310 AC010618.1-201ENST00000469924 477 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms