Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RIPK4P57078 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.8□□□□□ -1.64
RIPK4P57078 AC026403.1-201ENST00000518938 295 ntBASIC4.8□□□□□ -1.64
RIPK4P57078 AC023161.2-201ENST00000551218 780 ntBASIC4.8□□□□□ -1.64
RIPK4P57078 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC4.8□□□□□ -1.64
RIPK4P57078 HMGB3P26-201ENST00000560051 582 ntBASIC4.8□□□□□ -1.64
RIPK4P57078 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.8□□□□□ -1.64
RIPK4P57078 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.8□□□□□ -1.64
RIPK4P57078 AP003499.2-201ENST00000624100 483 ntBASIC4.8□□□□□ -1.64
RIPK4P57078 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.8□□□□□ -1.64
RIPK4P57078 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.8□□□□□ -1.64
RIPK4P57078 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC4.8□□□□□ -1.64
RIPK4P57078 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.8□□□□□ -1.64
RIPK4P57078 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.79□□□□□ -1.64
RIPK4P57078 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RIPK4P57078 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.79□□□□□ -1.64
RIPK4P57078 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
RIPK4P57078 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC4.79□□□□□ -1.64
RIPK4P57078 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
RIPK4P57078 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RIPK4P57078 RN7SKP56-201ENST00000410513 331 ntBASIC4.79□□□□□ -1.64
RIPK4P57078 VN1R31P-201ENST00000417498 730 ntBASIC4.79□□□□□ -1.64
RIPK4P57078 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.79□□□□□ -1.64
RIPK4P57078 RPL37P1-201ENST00000432310 284 ntBASIC4.79□□□□□ -1.64
RIPK4P57078 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.79□□□□□ -1.64
RIPK4P57078 RPL7P15-201ENST00000461190 712 ntBASIC4.79□□□□□ -1.64
RIPK4P57078 AC106707.2-201ENST00000484182 374 ntBASIC4.79□□□□□ -1.64
RIPK4P57078 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.79□□□□□ -1.64
RIPK4P57078 RFPL4AP3-201ENST00000515267 345 ntBASIC4.79□□□□□ -1.64
RIPK4P57078 AC025857.1-201ENST00000525252 377 ntBASIC4.79□□□□□ -1.64
RIPK4P57078 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.79□□□□□ -1.64
RIPK4P57078 TRAV15-201ENST00000556680 249 ntBASIC4.79□□□□□ -1.64
RIPK4P57078 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.79□□□□□ -1.64
RIPK4P57078 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.79□□□□□ -1.64
RIPK4P57078 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.79□□□□□ -1.64
RIPK4P57078 OR8B1P-202ENST00000641132 1178 ntBASIC4.79□□□□□ -1.64
RIPK4P57078 AC009093.8-201ENST00000641769 292 ntBASIC4.79□□□□□ -1.64
RIPK4P57078 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
RIPK4P57078 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
RIPK4P57078 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.79□□□□□ -1.64
RIPK4P57078 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
RIPK4P57078 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
RIPK4P57078 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
RIPK4P57078 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
RIPK4P57078 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RIPK4P57078 RPS4XP5-202ENST00000449995 1334 ntBASIC4.78□□□□□ -1.64
RIPK4P57078 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.78□□□□□ -1.64
RIPK4P57078 AC007342.7-201ENST00000624610 2337 ntBASIC4.78□□□□□ -1.64
RIPK4P57078 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.78□□□□□ -1.64
RIPK4P57078 SNORD9-201ENST00000362566 104 ntBASIC4.78□□□□□ -1.64
RIPK4P57078 Y_RNA.62-201ENST00000362840 99 ntBASIC4.78□□□□□ -1.64
RIPK4P57078 RNU6-1331P-201ENST00000363658 106 ntBASIC4.78□□□□□ -1.64
RIPK4P57078 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.78□□□□□ -1.64
RIPK4P57078 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
RIPK4P57078 HMGN2P8-201ENST00000391458 268 ntBASIC4.78□□□□□ -1.64
RIPK4P57078 ATP5F1P4-201ENST00000397288 746 ntBASIC4.78□□□□□ -1.64
RIPK4P57078 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RIPK4P57078 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.78□□□□□ -1.64
RIPK4P57078 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.78□□□□□ -1.64
RIPK4P57078 SNRPFP2-201ENST00000440710 251 ntBASIC4.78□□□□□ -1.64
RIPK4P57078 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC4.78□□□□□ -1.64
RIPK4P57078 AC098799.1-201ENST00000504752 800 ntBASIC4.78□□□□□ -1.64
RIPK4P57078 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.78□□□□□ -1.64
RIPK4P57078 RN7SKP18-201ENST00000516005 275 ntBASIC4.78□□□□□ -1.64
RIPK4P57078 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.78□□□□□ -1.64
RIPK4P57078 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.78□□□□□ -1.64
RIPK4P57078 MIR4644-201ENST00000579929 84 ntBASIC4.78□□□□□ -1.64
RIPK4P57078 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RIPK4P57078 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RIPK4P57078 AC110741.2-201ENST00000605278 268 ntBASIC4.78□□□□□ -1.64
RIPK4P57078 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RIPK4P57078 SNORA51-201ENST00000606420 132 ntBASIC4.78□□□□□ -1.64
RIPK4P57078 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RIPK4P57078 U7.8-201ENST00000619968 63 ntBASIC4.78□□□□□ -1.64
RIPK4P57078 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.78□□□□□ -1.64
RIPK4P57078 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
RIPK4P57078 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RIPK4P57078 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.78□□□□□ -1.64
RIPK4P57078 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC4.78□□□□□ -1.64
RIPK4P57078 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RIPK4P57078 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RIPK4P57078 AC098592.2-201ENST00000413158 265 ntBASIC4.77□□□□□ -1.65
RIPK4P57078 SAGE2P-201ENST00000420011 2126 ntBASIC4.77□□□□□ -1.65
RIPK4P57078 RPL21P109-201ENST00000422213 475 ntBASIC4.77□□□□□ -1.65
RIPK4P57078 AL389915.1-201ENST00000422463 466 ntBASIC4.77□□□□□ -1.65
RIPK4P57078 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.77□□□□□ -1.65
RIPK4P57078 AL606490.8-201ENST00000441624 319 ntBASIC4.77□□□□□ -1.65
RIPK4P57078 NPM1P39-201ENST00000449818 867 ntBASIC4.77□□□□□ -1.65
RIPK4P57078 OR6C72P-201ENST00000451403 892 ntBASIC4.77□□□□□ -1.65
RIPK4P57078 DNAJC19P1-201ENST00000455312 319 ntBASIC4.77□□□□□ -1.65
RIPK4P57078 AC005726.1-201ENST00000494679 427 ntBASIC4.77□□□□□ -1.65
RIPK4P57078 AC091917.2-201ENST00000505002 744 ntBASIC4.77□□□□□ -1.65
RIPK4P57078 SNORA70.18-201ENST00000516696 98 ntBASIC4.77□□□□□ -1.65
RIPK4P57078 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.77□□□□□ -1.65
RIPK4P57078 IGKV2D-23-201ENST00000518179 286 ntBASIC4.77□□□□□ -1.65
RIPK4P57078 NPM1P52-201ENST00000518264 846 ntBASIC4.77□□□□□ -1.65
RIPK4P57078 RANP9-201ENST00000519957 271 ntBASIC4.77□□□□□ -1.65
RIPK4P57078 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC4.77□□□□□ -1.65
RIPK4P57078 AC092747.2-201ENST00000545069 983 ntBASIC4.77□□□□□ -1.65
RIPK4P57078 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms