Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.25□□□□□ -1.73
CLDN20P56880 AL450263.2-201ENST00000439400 589 ntBASIC4.25□□□□□ -1.73
CLDN20P56880 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.25□□□□□ -1.73
CLDN20P56880 AC073264.2-201ENST00000448886 166 ntBASIC4.25□□□□□ -1.73
CLDN20P56880 AC010326.1-201ENST00000462726 602 ntBASIC4.25□□□□□ -1.73
CLDN20P56880 RN7SL354P-201ENST00000469282 294 ntBASIC4.25□□□□□ -1.73
CLDN20P56880 AC006511.1-201ENST00000470614 315 ntBASIC4.25□□□□□ -1.73
CLDN20P56880 AC011979.1-201ENST00000472300 483 ntBASIC4.25□□□□□ -1.73
CLDN20P56880 RPS29P22-201ENST00000472363 168 ntBASIC4.25□□□□□ -1.73
CLDN20P56880 AC104689.1-201ENST00000473356 768 ntBASIC4.25□□□□□ -1.73
CLDN20P56880 VPS26AP1-201ENST00000483197 979 ntBASIC4.25□□□□□ -1.73
CLDN20P56880 NIP7P2-201ENST00000485801 544 ntBASIC4.25□□□□□ -1.73
CLDN20P56880 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CLDN20P56880 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.25□□□□□ -1.73
CLDN20P56880 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.25□□□□□ -1.73
CLDN20P56880 IGKV1-32-201ENST00000519290 311 ntBASIC4.25□□□□□ -1.73
CLDN20P56880 HIGD1AP6-201ENST00000521833 279 ntBASIC4.25□□□□□ -1.73
CLDN20P56880 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.25□□□□□ -1.73
CLDN20P56880 AP006289.1-201ENST00000538089 277 ntBASIC4.25□□□□□ -1.73
CLDN20P56880 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CLDN20P56880 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.25□□□□□ -1.73
CLDN20P56880 AC004217.3-201ENST00000551552 878 ntBASIC4.25□□□□□ -1.73
CLDN20P56880 AL110118.1-201ENST00000553543 400 ntBASIC4.25□□□□□ -1.73
CLDN20P56880 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.25□□□□□ -1.73
CLDN20P56880 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.25□□□□□ -1.73
CLDN20P56880 RN7SL652P-201ENST00000577769 300 ntBASIC4.25□□□□□ -1.73
CLDN20P56880 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC4.25□□□□□ -1.73
CLDN20P56880 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC4.25□□□□□ -1.73
CLDN20P56880 AC069545.1-201ENST00000605671 358 ntBASIC4.25□□□□□ -1.73
CLDN20P56880 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.25□□□□□ -1.73
CLDN20P56880 MIR6780A-201ENST00000615089 68 ntBASIC4.25□□□□□ -1.73
CLDN20P56880 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CLDN20P56880 AC120349.3-201ENST00000624377 529 ntBASIC4.25□□□□□ -1.73
CLDN20P56880 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.25□□□□□ -1.73
CLDN20P56880 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
CLDN20P56880 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CLDN20P56880 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.25□□□□□ -1.73
CLDN20P56880 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
CLDN20P56880 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.25□□□□□ -1.73
CLDN20P56880 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CLDN20P56880 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
CLDN20P56880 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
CLDN20P56880 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
CLDN20P56880 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.24□□□□□ -1.73
CLDN20P56880 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CLDN20P56880 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
CLDN20P56880 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
CLDN20P56880 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.24□□□□□ -1.73
CLDN20P56880 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
CLDN20P56880 RNU6-603P-201ENST00000411403 107 ntBASIC4.24□□□□□ -1.73
CLDN20P56880 RPL26P29-201ENST00000415623 438 ntBASIC4.24□□□□□ -1.73
CLDN20P56880 ATG4AP1-201ENST00000416893 538 ntBASIC4.24□□□□□ -1.73
CLDN20P56880 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.24□□□□□ -1.73
CLDN20P56880 AC007435.1-201ENST00000421086 415 ntBASIC4.24□□□□□ -1.73
CLDN20P56880 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC4.24□□□□□ -1.73
CLDN20P56880 DPRXP1-201ENST00000426312 460 ntBASIC4.24□□□□□ -1.73
CLDN20P56880 BLOC1S2P1-201ENST00000428431 301 ntBASIC4.24□□□□□ -1.73
CLDN20P56880 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.24□□□□□ -1.73
CLDN20P56880 AC069285.2-201ENST00000440210 275 ntBASIC4.24□□□□□ -1.73
CLDN20P56880 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.24□□□□□ -1.73
CLDN20P56880 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC4.24□□□□□ -1.73
CLDN20P56880 RPS27AP15-201ENST00000447672 466 ntBASIC4.24□□□□□ -1.73
CLDN20P56880 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.24□□□□□ -1.73
CLDN20P56880 AC104306.1-201ENST00000449702 371 ntBASIC4.24□□□□□ -1.73
CLDN20P56880 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.24□□□□□ -1.73
CLDN20P56880 RPS29P33-201ENST00000456717 146 ntBASIC4.24□□□□□ -1.73
CLDN20P56880 RPL23AP72-201ENST00000492447 435 ntBASIC4.24□□□□□ -1.73
CLDN20P56880 DYNLL1P6-201ENST00000503440 264 ntBASIC4.24□□□□□ -1.73
CLDN20P56880 AC091951.3-201ENST00000504093 246 ntBASIC4.24□□□□□ -1.73
CLDN20P56880 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.24□□□□□ -1.73
CLDN20P56880 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC4.24□□□□□ -1.73
CLDN20P56880 OR4A2P-201ENST00000527276 913 ntBASIC4.24□□□□□ -1.73
CLDN20P56880 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.24□□□□□ -1.73
CLDN20P56880 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
CLDN20P56880 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.24□□□□□ -1.73
CLDN20P56880 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.24□□□□□ -1.73
CLDN20P56880 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.24□□□□□ -1.73
CLDN20P56880 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.24□□□□□ -1.73
CLDN20P56880 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC4.24□□□□□ -1.73
CLDN20P56880 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.24□□□□□ -1.73
CLDN20P56880 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.24□□□□□ -1.73
CLDN20P56880 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.24□□□□□ -1.73
CLDN20P56880 AC073091.2-201ENST00000603205 907 ntBASIC4.24□□□□□ -1.73
CLDN20P56880 AC091488.1-201ENST00000604239 660 ntBASIC4.24□□□□□ -1.73
CLDN20P56880 AL008729.2-201ENST00000606393 473 ntBASIC4.24□□□□□ -1.73
CLDN20P56880 MIR6820-201ENST00000611508 62 ntBASIC4.24□□□□□ -1.73
CLDN20P56880 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.24□□□□□ -1.73
CLDN20P56880 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC4.24□□□□□ -1.73
CLDN20P56880 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CLDN20P56880 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CLDN20P56880 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CLDN20P56880 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
CLDN20P56880 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
CLDN20P56880 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.24□□□□□ -1.73
CLDN20P56880 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
CLDN20P56880 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.24□□□□□ -1.73
CLDN20P56880 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CLDN20P56880 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CLDN20P56880 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
CLDN20P56880 AL136164.3-201ENST00000624429 3978 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms