Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AL390862.1-201ENST00000635467 1469 ntBASIC5.12□□□□□ -1.59
NEK3P51956 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NEK3P51956 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.12□□□□□ -1.59
NEK3P51956 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NEK3P51956 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.11□□□□□ -1.59
NEK3P51956 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NEK3P51956 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NEK3P51956 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NEK3P51956 RNA5SP428-201ENST00000365129 132 ntBASIC5.11□□□□□ -1.59
NEK3P51956 SNORA51.8-201ENST00000384234 132 ntBASIC5.11□□□□□ -1.59
NEK3P51956 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
NEK3P51956 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC5.11□□□□□ -1.59
NEK3P51956 SETP15-201ENST00000412724 337 ntBASIC5.11□□□□□ -1.59
NEK3P51956 MTND4P22-201ENST00000413116 1169 ntBASIC5.11□□□□□ -1.59
NEK3P51956 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.11□□□□□ -1.59
NEK3P51956 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC5.11□□□□□ -1.59
NEK3P51956 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC5.11□□□□□ -1.59
NEK3P51956 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC5.11□□□□□ -1.59
NEK3P51956 RPL31P45-201ENST00000419532 356 ntBASIC5.11□□□□□ -1.59
NEK3P51956 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC5.11□□□□□ -1.59
NEK3P51956 COX6CP13-201ENST00000428703 226 ntBASIC5.11□□□□□ -1.59
NEK3P51956 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.11□□□□□ -1.59
NEK3P51956 AC073143.1-201ENST00000436316 395 ntBASIC5.11□□□□□ -1.59
NEK3P51956 RHOT1P3-201ENST00000436571 331 ntBASIC5.11□□□□□ -1.59
NEK3P51956 TPT1P13-201ENST00000449760 499 ntBASIC5.11□□□□□ -1.59
NEK3P51956 RPL37P6-202ENST00000464216 403 ntBASIC5.11□□□□□ -1.59
NEK3P51956 AC146507.1-201ENST00000468335 354 ntBASIC5.11□□□□□ -1.59
NEK3P51956 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC5.11□□□□□ -1.59
NEK3P51956 RPL7P18-201ENST00000478965 734 ntBASIC5.11□□□□□ -1.59
NEK3P51956 GAPDHP36-201ENST00000480688 918 ntBASIC5.11□□□□□ -1.59
NEK3P51956 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NEK3P51956 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.11□□□□□ -1.59
NEK3P51956 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC5.11□□□□□ -1.59
NEK3P51956 ENPP7P9-201ENST00000514456 627 ntBASIC5.11□□□□□ -1.59
NEK3P51956 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC5.11□□□□□ -1.59
NEK3P51956 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC5.11□□□□□ -1.59
NEK3P51956 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC5.11□□□□□ -1.59
NEK3P51956 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC5.11□□□□□ -1.59
NEK3P51956 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC5.11□□□□□ -1.59
NEK3P51956 SLC2A13P1-201ENST00000531560 322 ntBASIC5.11□□□□□ -1.59
NEK3P51956 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.11□□□□□ -1.59
NEK3P51956 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.11□□□□□ -1.59
NEK3P51956 REXO2-218ENST00000544827 880 ntTSL 3 BASIC5.11□□□□□ -1.59
NEK3P51956 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC5.11□□□□□ -1.59
NEK3P51956 AC090502.2-201ENST00000549267 280 ntBASIC5.11□□□□□ -1.59
NEK3P51956 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC5.11□□□□□ -1.59
NEK3P51956 EDDM3DP-201ENST00000554692 434 ntBASIC5.11□□□□□ -1.59
NEK3P51956 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.11□□□□□ -1.59
NEK3P51956 HMGB2P1-201ENST00000591146 634 ntBASIC5.11□□□□□ -1.59
NEK3P51956 AC105254.2-201ENST00000603636 436 ntBASIC5.11□□□□□ -1.59
NEK3P51956 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5.11□□□□□ -1.59
NEK3P51956 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5.11□□□□□ -1.59
NEK3P51956 AC005084.1-201ENST00000605160 304 ntBASIC5.11□□□□□ -1.59
NEK3P51956 AP001521.1-201ENST00000609150 300 ntBASIC5.11□□□□□ -1.59
NEK3P51956 AC116651.1-201ENST00000609724 556 ntBASIC5.11□□□□□ -1.59
NEK3P51956 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.11□□□□□ -1.59
NEK3P51956 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NEK3P51956 CASC19-221ENST00000641309 1382 ntBASIC5.11□□□□□ -1.59
NEK3P51956 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
NEK3P51956 AC025031.4-201ENST00000621248 3271 ntBASIC5.11□□□□□ -1.59
NEK3P51956 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NEK3P51956 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
NEK3P51956 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC5.11□□□□□ -1.59
NEK3P51956 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NEK3P51956 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NEK3P51956 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
NEK3P51956 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
NEK3P51956 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
NEK3P51956 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NEK3P51956 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
NEK3P51956 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
NEK3P51956 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NEK3P51956 RNU6-157P-201ENST00000383957 107 ntBASIC5.1□□□□□ -1.59
NEK3P51956 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.1□□□□□ -1.59
NEK3P51956 MIR1250-201ENST00000408098 113 ntBASIC5.1□□□□□ -1.59
NEK3P51956 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC5.1□□□□□ -1.59
NEK3P51956 TIMM9P2-201ENST00000419324 266 ntBASIC5.1□□□□□ -1.59
NEK3P51956 MTND2P16-201ENST00000419987 799 ntBASIC5.1□□□□□ -1.59
NEK3P51956 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC5.1□□□□□ -1.59
NEK3P51956 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.1□□□□□ -1.59
NEK3P51956 PSMA2P3-201ENST00000429685 675 ntBASIC5.1□□□□□ -1.59
NEK3P51956 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.1□□□□□ -1.59
NEK3P51956 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
NEK3P51956 FGF7P5-201ENST00000441829 291 ntBASIC5.1□□□□□ -1.59
NEK3P51956 AC073648.4-201ENST00000442655 781 ntBASIC5.1□□□□□ -1.59
NEK3P51956 OR7E125P-201ENST00000443450 846 ntBASIC5.1□□□□□ -1.59
NEK3P51956 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC5.1□□□□□ -1.59
NEK3P51956 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
NEK3P51956 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC5.1□□□□□ -1.59
NEK3P51956 SLC31A1P1-201ENST00000451221 567 ntBASIC5.1□□□□□ -1.59
NEK3P51956 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.1□□□□□ -1.59
NEK3P51956 RPL35AP28-201ENST00000459730 331 ntBASIC5.1□□□□□ -1.59
NEK3P51956 AC091180.1-201ENST00000462104 372 ntBASIC5.1□□□□□ -1.59
NEK3P51956 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.1□□□□□ -1.59
NEK3P51956 AC090686.1-201ENST00000481577 749 ntBASIC5.1□□□□□ -1.59
NEK3P51956 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC5.1□□□□□ -1.59
NEK3P51956 RPS23P1-201ENST00000491662 432 ntBASIC5.1□□□□□ -1.59
NEK3P51956 SETP14-201ENST00000497538 873 ntBASIC5.1□□□□□ -1.59
NEK3P51956 AC140172.1-201ENST00000502928 141 ntBASIC5.1□□□□□ -1.59
NEK3P51956 AC010350.1-201ENST00000504908 231 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms