Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.71□□□□□ -1.82
BRCA2P51587 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
BRCA2P51587 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
BRCA2P51587 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.71□□□□□ -1.82
BRCA2P51587 GVINP1-202ENST00000531871 7271 ntBASIC3.7□□□□□ -1.82
BRCA2P51587 MIR133A2-201ENST00000347538 102 ntBASIC3.7□□□□□ -1.82
BRCA2P51587 AL513477.1-202ENST00000417061 214 ntBASIC3.7□□□□□ -1.82
BRCA2P51587 VTI1BP4-201ENST00000427516 527 ntBASIC3.7□□□□□ -1.82
BRCA2P51587 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.7□□□□□ -1.82
BRCA2P51587 RPS4XP2-201ENST00000458402 793 ntBASIC3.7□□□□□ -1.82
BRCA2P51587 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.7□□□□□ -1.82
BRCA2P51587 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.7□□□□□ -1.82
BRCA2P51587 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
BRCA2P51587 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
BRCA2P51587 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
BRCA2P51587 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
BRCA2P51587 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
BRCA2P51587 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.7□□□□□ -1.82
BRCA2P51587 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC3.7□□□□□ -1.82
BRCA2P51587 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.7□□□□□ -1.82
BRCA2P51587 AC128687.2-201ENST00000609657 566 ntBASIC3.7□□□□□ -1.82
BRCA2P51587 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.7□□□□□ -1.82
BRCA2P51587 CYCSP41-201ENST00000616920 296 ntBASIC3.7□□□□□ -1.82
BRCA2P51587 AL591424.2-201ENST00000617023 128 ntBASIC3.7□□□□□ -1.82
BRCA2P51587 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.7□□□□□ -1.82
BRCA2P51587 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
BRCA2P51587 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
BRCA2P51587 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
BRCA2P51587 AP000432.2-201ENST00000624164 2048 ntBASIC3.7□□□□□ -1.82
BRCA2P51587 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
BRCA2P51587 AC140076.1-201ENST00000449897 361 ntBASIC3.7□□□□□ -1.82
BRCA2P51587 AC083837.1-201ENST00000565297 2994 ntBASIC3.7□□□□□ -1.82
BRCA2P51587 CYCSP39-201ENST00000565821 309 ntBASIC3.7□□□□□ -1.82
BRCA2P51587 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC3.7□□□□□ -1.82
BRCA2P51587 AC007496.3-201ENST00000624987 3443 ntBASIC3.7□□□□□ -1.82
BRCA2P51587 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC3.69□□□□□ -1.82
BRCA2P51587 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.69□□□□□ -1.82
BRCA2P51587 AL079342.1-201ENST00000401460 267 ntBASIC3.69□□□□□ -1.82
BRCA2P51587 MOB1AP1-201ENST00000430903 535 ntBASIC3.69□□□□□ -1.82
BRCA2P51587 RN7SL585P-201ENST00000470538 280 ntBASIC3.69□□□□□ -1.82
BRCA2P51587 TRBV12-1-201ENST00000479785 344 ntBASIC3.69□□□□□ -1.82
BRCA2P51587 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
BRCA2P51587 HIGD1AP1-201ENST00000550979 275 ntBASIC3.69□□□□□ -1.82
BRCA2P51587 AC012603.1-201ENST00000606424 528 ntBASIC3.69□□□□□ -1.82
BRCA2P51587 MTCO1P8-201ENST00000416914 1523 ntBASIC3.69□□□□□ -1.82
BRCA2P51587 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
BRCA2P51587 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
BRCA2P51587 MIR1271-201ENST00000408537 86 ntBASIC3.69□□□□□ -1.82
BRCA2P51587 AC233981.1-201ENST00000423224 461 ntBASIC3.69□□□□□ -1.82
BRCA2P51587 AC005189.1-201ENST00000431286 310 ntBASIC3.69□□□□□ -1.82
BRCA2P51587 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC3.69□□□□□ -1.82
BRCA2P51587 RNU4-29P-201ENST00000515943 174 ntBASIC3.69□□□□□ -1.82
BRCA2P51587 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.69□□□□□ -1.82
BRCA2P51587 AC079089.3-201ENST00000603094 673 ntBASIC3.69□□□□□ -1.82
BRCA2P51587 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
BRCA2P51587 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
BRCA2P51587 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
BRCA2P51587 SNORA67.4-201ENST00000384688 142 ntBASIC3.69□□□□□ -1.82
BRCA2P51587 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.69□□□□□ -1.82
BRCA2P51587 RPS4XP13-201ENST00000483219 789 ntBASIC3.69□□□□□ -1.82
BRCA2P51587 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.69□□□□□ -1.82
BRCA2P51587 AC026333.2-201ENST00000542164 106 ntBASIC3.69□□□□□ -1.82
BRCA2P51587 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.69□□□□□ -1.82
BRCA2P51587 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
BRCA2P51587 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
BRCA2P51587 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
BRCA2P51587 AL672296.1-201ENST00000427780 2158 ntBASIC3.68□□□□□ -1.82
BRCA2P51587 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
BRCA2P51587 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
BRCA2P51587 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
BRCA2P51587 OR13C3-201ENST00000374781 1108 ntBASIC3.68□□□□□ -1.82
BRCA2P51587 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.68□□□□□ -1.82
BRCA2P51587 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC3.68□□□□□ -1.82
BRCA2P51587 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC3.68□□□□□ -1.82
BRCA2P51587 AC069285.2-201ENST00000440210 275 ntBASIC3.68□□□□□ -1.82
BRCA2P51587 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.68□□□□□ -1.82
BRCA2P51587 RNA5SP116-201ENST00000516132 98 ntBASIC3.68□□□□□ -1.82
BRCA2P51587 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.68□□□□□ -1.82
BRCA2P51587 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.68□□□□□ -1.82
BRCA2P51587 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.68□□□□□ -1.82
BRCA2P51587 MTND6P33-201ENST00000571794 183 ntBASIC3.68□□□□□ -1.82
BRCA2P51587 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.68□□□□□ -1.82
BRCA2P51587 AC015871.5-202ENST00000623252 701 ntBASIC3.68□□□□□ -1.82
BRCA2P51587 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
BRCA2P51587 ARNTL2-207ENST00000542388 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
BRCA2P51587 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
BRCA2P51587 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.68□□□□□ -1.82
BRCA2P51587 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
BRCA2P51587 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC3.68□□□□□ -1.82
BRCA2P51587 DNM1P47-203ENST00000571780 12667 ntBASIC3.68□□□□□ -1.82
BRCA2P51587 AL691447.1-201ENST00000419456 387 ntBASIC3.68□□□□□ -1.82
BRCA2P51587 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.68□□□□□ -1.82
BRCA2P51587 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC3.68□□□□□ -1.82
BRCA2P51587 RN7SKP46-201ENST00000515942 234 ntBASIC3.68□□□□□ -1.82
BRCA2P51587 KCTD9P6-201ENST00000522306 950 ntBASIC3.68□□□□□ -1.82
BRCA2P51587 AC008489.1-201ENST00000524271 483 ntBASIC3.68□□□□□ -1.82
BRCA2P51587 AC006363.1-201ENST00000603806 463 ntBASIC3.68□□□□□ -1.82
BRCA2P51587 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
BRCA2P51587 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC3.68□□□□□ -1.82
BRCA2P51587 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 133.5 ms