Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AC011468.4-201ENST00000603942 409 ntBASIC4.31□□□□□ -1.72
SSR1P43307 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SSR1P43307 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.31□□□□□ -1.72
SSR1P43307 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.31□□□□□ -1.72
SSR1P43307 AP000255.1-201ENST00000610276 676 ntBASIC4.31□□□□□ -1.72
SSR1P43307 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SSR1P43307 MIR486-1-201ENST00000612171 68 ntBASIC4.31□□□□□ -1.72
SSR1P43307 AC114781.5-201ENST00000615297 108 ntBASIC4.31□□□□□ -1.72
SSR1P43307 AC006065.5-201ENST00000623427 349 ntBASIC4.31□□□□□ -1.72
SSR1P43307 AP005264.7-201ENST00000625003 745 ntBASIC4.31□□□□□ -1.72
SSR1P43307 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC4.31□□□□□ -1.72
SSR1P43307 SNORA50A-202ENST00000629536 136 ntBASIC4.31□□□□□ -1.72
SSR1P43307 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SSR1P43307 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
SSR1P43307 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.31□□□□□ -1.72
SSR1P43307 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.3□□□□□ -1.72
SSR1P43307 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SSR1P43307 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
SSR1P43307 AC116667.1-201ENST00000604855 2072 ntBASIC4.3□□□□□ -1.72
SSR1P43307 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SSR1P43307 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SSR1P43307 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
SSR1P43307 RNU6-31P-201ENST00000384388 108 ntBASIC4.3□□□□□ -1.72
SSR1P43307 SNORA3C-201ENST00000408792 125 ntBASIC4.3□□□□□ -1.72
SSR1P43307 RPL26P37-201ENST00000411983 438 ntBASIC4.3□□□□□ -1.72
SSR1P43307 AC245028.1-201ENST00000423259 256 ntBASIC4.3□□□□□ -1.72
SSR1P43307 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.3□□□□□ -1.72
SSR1P43307 VDAC1P6-201ENST00000430062 855 ntBASIC4.3□□□□□ -1.72
SSR1P43307 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.3□□□□□ -1.72
SSR1P43307 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.3□□□□□ -1.72
SSR1P43307 AC041039.1-201ENST00000485656 536 ntBASIC4.3□□□□□ -1.72
SSR1P43307 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.3□□□□□ -1.72
SSR1P43307 HPRT1P2-201ENST00000505250 544 ntBASIC4.3□□□□□ -1.72
SSR1P43307 AC106806.2-201ENST00000509365 500 ntBASIC4.3□□□□□ -1.72
SSR1P43307 KRT19P6-201ENST00000510983 209 ntBASIC4.3□□□□□ -1.72
SSR1P43307 IGHV3-76-201ENST00000522465 295 ntBASIC4.3□□□□□ -1.72
SSR1P43307 AC009643.1-201ENST00000532030 391 ntBASIC4.3□□□□□ -1.72
SSR1P43307 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.3□□□□□ -1.72
SSR1P43307 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.3□□□□□ -1.72
SSR1P43307 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.3□□□□□ -1.72
SSR1P43307 AC025627.2-201ENST00000576220 160 ntBASIC4.3□□□□□ -1.72
SSR1P43307 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SSR1P43307 AC008745.1-201ENST00000604064 271 ntBASIC4.3□□□□□ -1.72
SSR1P43307 AC104662.1-201ENST00000604448 511 ntBASIC4.3□□□□□ -1.72
SSR1P43307 AC012557.1-201ENST00000607115 611 ntBASIC4.3□□□□□ -1.72
SSR1P43307 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.3□□□□□ -1.72
SSR1P43307 AL591424.2-201ENST00000617023 128 ntBASIC4.3□□□□□ -1.72
SSR1P43307 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.3□□□□□ -1.72
SSR1P43307 AL773545.4-201ENST00000637262 310 ntBASIC4.3□□□□□ -1.72
SSR1P43307 AL513478.4-201ENST00000641636 310 ntBASIC4.3□□□□□ -1.72
SSR1P43307 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SSR1P43307 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SSR1P43307 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
SSR1P43307 NMD3P1-201ENST00000439704 1488 ntBASIC4.3□□□□□ -1.72
SSR1P43307 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
SSR1P43307 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
SSR1P43307 AC096656.1-201ENST00000623826 1364 ntBASIC4.29□□□□□ -1.72
SSR1P43307 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SSR1P43307 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
SSR1P43307 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
SSR1P43307 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.29□□□□□ -1.72
SSR1P43307 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
SSR1P43307 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
SSR1P43307 AL161909.1-201ENST00000397390 712 ntBASIC4.29□□□□□ -1.72
SSR1P43307 AP000567.1-201ENST00000406413 156 ntBASIC4.29□□□□□ -1.72
SSR1P43307 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4.29□□□□□ -1.72
SSR1P43307 FAR2P2-201ENST00000413041 594 ntBASIC4.29□□□□□ -1.72
SSR1P43307 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.29□□□□□ -1.72
SSR1P43307 AC073143.1-201ENST00000436316 395 ntBASIC4.29□□□□□ -1.72
SSR1P43307 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.29□□□□□ -1.72
SSR1P43307 RPS4XP4-201ENST00000443195 763 ntBASIC4.29□□□□□ -1.72
SSR1P43307 AP002345.1-201ENST00000456493 928 ntBASIC4.29□□□□□ -1.72
SSR1P43307 AC092754.2-201ENST00000463506 460 ntBASIC4.29□□□□□ -1.72
SSR1P43307 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.29□□□□□ -1.72
SSR1P43307 AC025674.1-201ENST00000507074 324 ntBASIC4.29□□□□□ -1.72
SSR1P43307 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.29□□□□□ -1.72
SSR1P43307 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.29□□□□□ -1.72
SSR1P43307 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
SSR1P43307 AC099522.1-202ENST00000514718 367 ntBASIC4.29□□□□□ -1.72
SSR1P43307 RNU7-143P-201ENST00000516781 65 ntBASIC4.29□□□□□ -1.72
SSR1P43307 RNA5SP143-201ENST00000516936 115 ntBASIC4.29□□□□□ -1.72
SSR1P43307 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.29□□□□□ -1.72
SSR1P43307 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.29□□□□□ -1.72
SSR1P43307 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.29□□□□□ -1.72
SSR1P43307 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.29□□□□□ -1.72
SSR1P43307 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SSR1P43307 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.29□□□□□ -1.72
SSR1P43307 MIR6820-201ENST00000611508 62 ntBASIC4.29□□□□□ -1.72
SSR1P43307 AC243654.2-201ENST00000612843 443 ntBASIC4.29□□□□□ -1.72
SSR1P43307 AC121761.2-201ENST00000617300 689 ntBASIC4.29□□□□□ -1.72
SSR1P43307 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.29□□□□□ -1.72
SSR1P43307 AC119674.1-212ENST00000641155 993 ntBASIC4.29□□□□□ -1.72
SSR1P43307 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
SSR1P43307 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.29□□□□□ -1.72
SSR1P43307 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
SSR1P43307 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.29□□□□□ -1.72
SSR1P43307 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
SSR1P43307 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
SSR1P43307 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SSR1P43307 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms