Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 AC023128.2-201ENST00000420880 1223 ntBASIC4.67□□□□□ -1.66
USP8P40818 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.67□□□□□ -1.66
USP8P40818 RPL7P4-203ENST00000430239 730 ntBASIC4.67□□□□□ -1.66
USP8P40818 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC4.67□□□□□ -1.66
USP8P40818 AC114495.1-201ENST00000441274 436 ntBASIC4.67□□□□□ -1.66
USP8P40818 MTCO1P53-201ENST00000441633 699 ntBASIC4.67□□□□□ -1.66
USP8P40818 AL645939.1-201ENST00000453429 797 ntBASIC4.67□□□□□ -1.66
USP8P40818 SBDSP1-204ENST00000453858 737 ntBASIC4.67□□□□□ -1.66
USP8P40818 AC008280.2-201ENST00000455473 307 ntBASIC4.67□□□□□ -1.66
USP8P40818 DHFRP3-201ENST00000455595 559 ntBASIC4.67□□□□□ -1.66
USP8P40818 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
USP8P40818 HPRT1P1-201ENST00000509498 657 ntBASIC4.67□□□□□ -1.66
USP8P40818 AP001207.2-201ENST00000519490 539 ntBASIC4.67□□□□□ -1.66
USP8P40818 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC4.67□□□□□ -1.66
USP8P40818 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.67□□□□□ -1.66
USP8P40818 AC137768.1-201ENST00000549998 553 ntBASIC4.67□□□□□ -1.66
USP8P40818 RPL23AP97-201ENST00000568955 471 ntBASIC4.67□□□□□ -1.66
USP8P40818 MIR4789-201ENST00000577469 82 ntBASIC4.67□□□□□ -1.66
USP8P40818 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.67□□□□□ -1.66
USP8P40818 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.67□□□□□ -1.66
USP8P40818 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.67□□□□□ -1.66
USP8P40818 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC4.67□□□□□ -1.66
USP8P40818 AC079587.1-201ENST00000603846 277 ntBASIC4.67□□□□□ -1.66
USP8P40818 AL160237.3-201ENST00000604114 1013 ntBASIC4.67□□□□□ -1.66
USP8P40818 AC115286.1-201ENST00000604298 434 ntBASIC4.67□□□□□ -1.66
USP8P40818 AC116651.1-201ENST00000609724 556 ntBASIC4.67□□□□□ -1.66
USP8P40818 RN7SL722P-201ENST00000617780 284 ntBASIC4.67□□□□□ -1.66
USP8P40818 AP004607.9-201ENST00000618202 316 ntBASIC4.67□□□□□ -1.66
USP8P40818 RN7SL565P-201ENST00000618246 284 ntBASIC4.67□□□□□ -1.66
USP8P40818 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC4.67□□□□□ -1.66
USP8P40818 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.67□□□□□ -1.66
USP8P40818 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
USP8P40818 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.67□□□□□ -1.66
USP8P40818 MAPK10-373ENST00000641983 6772 ntBASIC4.67□□□□□ -1.66
USP8P40818 AL137100.1-201ENST00000556703 1620 ntBASIC4.67□□□□□ -1.66
USP8P40818 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
USP8P40818 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
USP8P40818 AP001486.2-201ENST00000561652 5113 ntBASIC4.66□□□□□ -1.66
USP8P40818 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
USP8P40818 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.66□□□□□ -1.66
USP8P40818 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.66□□□□□ -1.66
USP8P40818 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
USP8P40818 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
USP8P40818 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
USP8P40818 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
USP8P40818 RNA5SP175-201ENST00000364275 119 ntBASIC4.66□□□□□ -1.66
USP8P40818 RNU4-7P-201ENST00000364758 141 ntBASIC4.66□□□□□ -1.66
USP8P40818 SNORD66.1-201ENST00000391230 76 ntBASIC4.66□□□□□ -1.66
USP8P40818 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.66□□□□□ -1.66
USP8P40818 RPS3AP23-201ENST00000401762 784 ntBASIC4.66□□□□□ -1.66
USP8P40818 SSR1P2-201ENST00000415208 787 ntBASIC4.66□□□□□ -1.66
USP8P40818 ZNF736P7Y-201ENST00000425158 820 ntBASIC4.66□□□□□ -1.66
USP8P40818 ARF4P4-201ENST00000439608 520 ntBASIC4.66□□□□□ -1.66
USP8P40818 AL096803.2-201ENST00000450032 677 ntBASIC4.66□□□□□ -1.66
USP8P40818 CALM1P2-201ENST00000452941 448 ntBASIC4.66□□□□□ -1.66
USP8P40818 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.66□□□□□ -1.66
USP8P40818 AC007686.1-201ENST00000488511 463 ntBASIC4.66□□□□□ -1.66
USP8P40818 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
USP8P40818 AC098862.1-201ENST00000504991 413 ntBASIC4.66□□□□□ -1.66
USP8P40818 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
USP8P40818 RN7SKP141-201ENST00000516167 338 ntBASIC4.66□□□□□ -1.66
USP8P40818 OR8G5-201ENST00000524943 1041 ntBASIC4.66□□□□□ -1.66
USP8P40818 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.66□□□□□ -1.66
USP8P40818 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.66□□□□□ -1.66
USP8P40818 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC4.66□□□□□ -1.66
USP8P40818 MTCYBP23-201ENST00000558717 1102 ntBASIC4.66□□□□□ -1.66
USP8P40818 AC084757.1-201ENST00000559987 490 ntBASIC4.66□□□□□ -1.66
USP8P40818 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.66□□□□□ -1.66
USP8P40818 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
USP8P40818 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.66□□□□□ -1.66
USP8P40818 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.66□□□□□ -1.66
USP8P40818 AL357094.1-201ENST00000603845 844 ntBASIC4.66□□□□□ -1.66
USP8P40818 AP002802.2-201ENST00000605877 235 ntBASIC4.66□□□□□ -1.66
USP8P40818 AC093673.2-201ENST00000609674 331 ntBASIC4.66□□□□□ -1.66
USP8P40818 AL021997.2-201ENST00000615674 271 ntBASIC4.66□□□□□ -1.66
USP8P40818 AC009159.2-201ENST00000617603 606 ntBASIC4.66□□□□□ -1.66
USP8P40818 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.66□□□□□ -1.66
USP8P40818 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
USP8P40818 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
USP8P40818 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
USP8P40818 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.66□□□□□ -1.66
USP8P40818 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.66□□□□□ -1.66
USP8P40818 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.66□□□□□ -1.66
USP8P40818 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.65□□□□□ -1.66
USP8P40818 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
USP8P40818 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
USP8P40818 FAM35DP-201ENST00000323387 2712 ntBASIC4.65□□□□□ -1.66
USP8P40818 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.65□□□□□ -1.66
USP8P40818 MIR585-201ENST00000384887 94 ntBASIC4.65□□□□□ -1.67
USP8P40818 MIR129-1-201ENST00000384972 72 ntBASIC4.65□□□□□ -1.67
USP8P40818 RPL23AP59-201ENST00000399415 461 ntBASIC4.65□□□□□ -1.67
USP8P40818 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.65□□□□□ -1.67
USP8P40818 UBE2V1P9-201ENST00000414760 368 ntBASIC4.65□□□□□ -1.67
USP8P40818 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.65□□□□□ -1.67
USP8P40818 RPS23P10-201ENST00000416185 486 ntBASIC4.65□□□□□ -1.67
USP8P40818 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.65□□□□□ -1.67
USP8P40818 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.65□□□□□ -1.67
USP8P40818 AL449283.1-202ENST00000418249 604 ntBASIC4.65□□□□□ -1.67
USP8P40818 AL356387.2-201ENST00000422272 243 ntBASIC4.65□□□□□ -1.67
USP8P40818 AC093698.1-201ENST00000423843 571 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms