Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 AL513478.4-201ENST00000641636 310 ntBASIC3.88□□□□□ -1.79
SHMT2P34897 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SHMT2P34897 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.88□□□□□ -1.79
SHMT2P34897 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SHMT2P34897 CYP1D1P-201ENST00000416662 1433 ntBASIC3.87□□□□□ -1.79
SHMT2P34897 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC3.87□□□□□ -1.79
SHMT2P34897 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.87□□□□□ -1.79
SHMT2P34897 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.87□□□□□ -1.79
SHMT2P34897 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.87□□□□□ -1.79
SHMT2P34897 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.87□□□□□ -1.79
SHMT2P34897 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SHMT2P34897 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
SHMT2P34897 AL589826.1-201ENST00000340697 249 ntBASIC3.87□□□□□ -1.79
SHMT2P34897 RNA5SP515-201ENST00000364570 118 ntBASIC3.87□□□□□ -1.79
SHMT2P34897 RNA5SP479-201ENST00000364858 117 ntBASIC3.87□□□□□ -1.79
SHMT2P34897 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.87□□□□□ -1.79
SHMT2P34897 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.87□□□□□ -1.79
SHMT2P34897 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SHMT2P34897 RNU4-74P-201ENST00000411280 161 ntBASIC3.87□□□□□ -1.79
SHMT2P34897 RPL7AP73-201ENST00000413490 353 ntBASIC3.87□□□□□ -1.79
SHMT2P34897 USP12PY-201ENST00000427677 1064 ntBASIC3.87□□□□□ -1.79
SHMT2P34897 AC087650.1-201ENST00000431445 468 ntBASIC3.87□□□□□ -1.79
SHMT2P34897 ZFAND6P1-201ENST00000434138 605 ntBASIC3.87□□□□□ -1.79
SHMT2P34897 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC3.87□□□□□ -1.79
SHMT2P34897 BTBD7P2-201ENST00000441962 620 ntBASIC3.87□□□□□ -1.79
SHMT2P34897 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.87□□□□□ -1.79
SHMT2P34897 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.87□□□□□ -1.79
SHMT2P34897 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.87□□□□□ -1.79
SHMT2P34897 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.87□□□□□ -1.79
SHMT2P34897 CLIC4P1-201ENST00000453177 535 ntBASIC3.87□□□□□ -1.79
SHMT2P34897 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SHMT2P34897 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.87□□□□□ -1.79
SHMT2P34897 AC010460.1-201ENST00000507087 466 ntBASIC3.87□□□□□ -1.79
SHMT2P34897 AC010342.1-201ENST00000514047 877 ntBASIC3.87□□□□□ -1.79
SHMT2P34897 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC3.87□□□□□ -1.79
SHMT2P34897 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC3.87□□□□□ -1.79
SHMT2P34897 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.87□□□□□ -1.79
SHMT2P34897 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.87□□□□□ -1.79
SHMT2P34897 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.87□□□□□ -1.79
SHMT2P34897 AC084757.1-201ENST00000559987 490 ntBASIC3.87□□□□□ -1.79
SHMT2P34897 AL731537.2-201ENST00000561565 951 ntBASIC3.87□□□□□ -1.79
SHMT2P34897 AC018552.3-201ENST00000567416 561 ntBASIC3.87□□□□□ -1.79
SHMT2P34897 AC120057.2-201ENST00000571520 271 ntBASIC3.87□□□□□ -1.79
SHMT2P34897 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.87□□□□□ -1.79
SHMT2P34897 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC3.87□□□□□ -1.79
SHMT2P34897 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.87□□□□□ -1.79
SHMT2P34897 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.87□□□□□ -1.79
SHMT2P34897 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.87□□□□□ -1.79
SHMT2P34897 AC024941.1-201ENST00000612250 334 ntBASIC3.87□□□□□ -1.79
SHMT2P34897 AC011472.4-201ENST00000615848 491 ntBASIC3.87□□□□□ -1.79
SHMT2P34897 AC025016.1-201ENST00000616746 682 ntBASIC3.87□□□□□ -1.79
SHMT2P34897 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.87□□□□□ -1.79
SHMT2P34897 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.87□□□□□ -1.79
SHMT2P34897 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SHMT2P34897 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SHMT2P34897 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SHMT2P34897 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.87□□□□□ -1.79
SHMT2P34897 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
SHMT2P34897 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SHMT2P34897 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
SHMT2P34897 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.86□□□□□ -1.79
SHMT2P34897 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.86□□□□□ -1.79
SHMT2P34897 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SHMT2P34897 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SHMT2P34897 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC3.86□□□□□ -1.79
SHMT2P34897 RNU6-304P-201ENST00000364855 107 ntBASIC3.86□□□□□ -1.79
SHMT2P34897 SNORD51.1-201ENST00000365405 77 ntBASIC3.86□□□□□ -1.79
SHMT2P34897 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
SHMT2P34897 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.86□□□□□ -1.79
SHMT2P34897 RNA5SP239-201ENST00000410218 129 ntBASIC3.86□□□□□ -1.79
SHMT2P34897 RN7SKP56-201ENST00000410513 331 ntBASIC3.86□□□□□ -1.79
SHMT2P34897 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC3.86□□□□□ -1.79
SHMT2P34897 MTND4P24-201ENST00000424002 397 ntBASIC3.86□□□□□ -1.79
SHMT2P34897 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.86□□□□□ -1.79
SHMT2P34897 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3.86□□□□□ -1.79
SHMT2P34897 PPIAP17-201ENST00000438507 471 ntBASIC3.86□□□□□ -1.79
SHMT2P34897 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.86□□□□□ -1.79
SHMT2P34897 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC3.86□□□□□ -1.79
SHMT2P34897 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC3.86□□□□□ -1.79
SHMT2P34897 HMGB1P26-201ENST00000452520 628 ntBASIC3.86□□□□□ -1.79
SHMT2P34897 RNU7-27P-201ENST00000459281 62 ntBASIC3.86□□□□□ -1.79
SHMT2P34897 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.86□□□□□ -1.79
SHMT2P34897 BTF3L4P4-201ENST00000506381 449 ntBASIC3.86□□□□□ -1.79
SHMT2P34897 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC3.86□□□□□ -1.79
SHMT2P34897 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.86□□□□□ -1.79
SHMT2P34897 RFPL1S-203ENST00000539579 330 ntBASIC3.86□□□□□ -1.79
SHMT2P34897 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SHMT2P34897 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC3.86□□□□□ -1.79
SHMT2P34897 AC084824.1-201ENST00000550917 1005 ntBASIC3.86□□□□□ -1.79
SHMT2P34897 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.86□□□□□ -1.79
SHMT2P34897 HYKK-203ENST00000563233 734 ntTSL 2 BASIC3.86□□□□□ -1.79
SHMT2P34897 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.86□□□□□ -1.79
SHMT2P34897 AL606490.9-201ENST00000603331 271 ntBASIC3.86□□□□□ -1.79
SHMT2P34897 AC025946.2-201ENST00000603398 234 ntBASIC3.86□□□□□ -1.79
SHMT2P34897 AC123786.2-201ENST00000603459 275 ntBASIC3.86□□□□□ -1.79
SHMT2P34897 AL592436.1-201ENST00000605135 558 ntBASIC3.86□□□□□ -1.79
SHMT2P34897 AC116447.1-201ENST00000613153 453 ntBASIC3.86□□□□□ -1.79
SHMT2P34897 AC016957.2-201ENST00000616998 848 ntBASIC3.86□□□□□ -1.79
SHMT2P34897 uc_338.9-201ENST00000617424 182 ntBASIC3.86□□□□□ -1.79
SHMT2P34897 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms