Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CHRNA3P32297 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.32□□□□□ -1.72
CHRNA3P32297 GCNT6-201ENST00000379591 934 ntBASIC4.32□□□□□ -1.72
CHRNA3P32297 AL356057.1-202ENST00000402263 756 ntBASIC4.32□□□□□ -1.72
CHRNA3P32297 AL356967.1-201ENST00000406305 431 ntBASIC4.32□□□□□ -1.72
CHRNA3P32297 RNU2-6P-201ENST00000411404 190 ntBASIC4.32□□□□□ -1.72
CHRNA3P32297 PGBD4P8-201ENST00000412993 562 ntBASIC4.32□□□□□ -1.72
CHRNA3P32297 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.32□□□□□ -1.72
CHRNA3P32297 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC4.32□□□□□ -1.72
CHRNA3P32297 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC4.32□□□□□ -1.72
CHRNA3P32297 RPL36AP13-201ENST00000457490 317 ntBASIC4.32□□□□□ -1.72
CHRNA3P32297 AC089999.1-201ENST00000460336 374 ntBASIC4.32□□□□□ -1.72
CHRNA3P32297 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC4.32□□□□□ -1.72
CHRNA3P32297 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.32□□□□□ -1.72
CHRNA3P32297 MTCO1P35-201ENST00000515270 228 ntBASIC4.32□□□□□ -1.72
CHRNA3P32297 RN7SKP21-201ENST00000516503 220 ntBASIC4.32□□□□□ -1.72
CHRNA3P32297 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.32□□□□□ -1.72
CHRNA3P32297 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.32□□□□□ -1.72
CHRNA3P32297 COX6B1P6-201ENST00000522347 255 ntBASIC4.32□□□□□ -1.72
CHRNA3P32297 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC4.32□□□□□ -1.72
CHRNA3P32297 CIR1P1-201ENST00000524055 1133 ntBASIC4.32□□□□□ -1.72
CHRNA3P32297 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.32□□□□□ -1.72
CHRNA3P32297 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.32□□□□□ -1.72
CHRNA3P32297 AC007224.1-201ENST00000564410 144 ntBASIC4.32□□□□□ -1.72
CHRNA3P32297 AL360157.1-201ENST00000565962 87 ntBASIC4.32□□□□□ -1.72
CHRNA3P32297 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CHRNA3P32297 AC010680.3-201ENST00000604215 520 ntBASIC4.32□□□□□ -1.72
CHRNA3P32297 AP003392.5-201ENST00000607857 415 ntBASIC4.32□□□□□ -1.72
CHRNA3P32297 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.32□□□□□ -1.72
CHRNA3P32297 AL109620.1-201ENST00000618738 1197 ntBASIC4.32□□□□□ -1.72
CHRNA3P32297 AC068724.3-201ENST00000625906 87 ntBASIC4.32□□□□□ -1.72
CHRNA3P32297 AL773545.4-201ENST00000637262 310 ntBASIC4.32□□□□□ -1.72
CHRNA3P32297 AL513478.4-201ENST00000641636 310 ntBASIC4.32□□□□□ -1.72
CHRNA3P32297 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CHRNA3P32297 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
CHRNA3P32297 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.32□□□□□ -1.72
CHRNA3P32297 AC025125.1-201ENST00000624743 1922 ntBASIC4.32□□□□□ -1.72
CHRNA3P32297 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CHRNA3P32297 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CHRNA3P32297 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
CHRNA3P32297 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
CHRNA3P32297 BDP1P-201ENST00000582658 1990 ntBASIC4.31□□□□□ -1.72
CHRNA3P32297 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.31□□□□□ -1.72
CHRNA3P32297 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.31□□□□□ -1.72
CHRNA3P32297 RNU6-252P-201ENST00000363232 107 ntBASIC4.31□□□□□ -1.72
CHRNA3P32297 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CHRNA3P32297 MIR708-201ENST00000390708 88 ntBASIC4.31□□□□□ -1.72
CHRNA3P32297 RNU2-65P-201ENST00000410162 185 ntBASIC4.31□□□□□ -1.72
CHRNA3P32297 TATDN1P1-201ENST00000414123 891 ntBASIC4.31□□□□□ -1.72
CHRNA3P32297 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.31□□□□□ -1.72
CHRNA3P32297 FAR1P1-201ENST00000427163 934 ntBASIC4.31□□□□□ -1.72
CHRNA3P32297 COX6B1P7-201ENST00000430845 235 ntBASIC4.31□□□□□ -1.72
CHRNA3P32297 BTF3P10-201ENST00000433415 495 ntBASIC4.31□□□□□ -1.72
CHRNA3P32297 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.31□□□□□ -1.72
CHRNA3P32297 AL356535.1-201ENST00000440335 398 ntBASIC4.31□□□□□ -1.72
CHRNA3P32297 AL691517.1-201ENST00000440833 1235 ntBASIC4.31□□□□□ -1.72
CHRNA3P32297 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.31□□□□□ -1.72
CHRNA3P32297 ARL5AP2-201ENST00000444698 533 ntBASIC4.31□□□□□ -1.72
CHRNA3P32297 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC4.31□□□□□ -1.72
CHRNA3P32297 AC114755.5-201ENST00000447760 831 ntBASIC4.31□□□□□ -1.72
CHRNA3P32297 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
CHRNA3P32297 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.31□□□□□ -1.72
CHRNA3P32297 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.31□□□□□ -1.72
CHRNA3P32297 RPL23AP2-201ENST00000471227 466 ntBASIC4.31□□□□□ -1.72
CHRNA3P32297 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
CHRNA3P32297 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.31□□□□□ -1.72
CHRNA3P32297 HMGB3P13-201ENST00000511263 607 ntBASIC4.31□□□□□ -1.72
CHRNA3P32297 AC008562.1-201ENST00000521763 330 ntBASIC4.31□□□□□ -1.72
CHRNA3P32297 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC4.31□□□□□ -1.72
CHRNA3P32297 AC107016.1-201ENST00000550463 337 ntBASIC4.31□□□□□ -1.72
CHRNA3P32297 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.31□□□□□ -1.72
CHRNA3P32297 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.31□□□□□ -1.72
CHRNA3P32297 AC025918.2-201ENST00000558683 763 ntBASIC4.31□□□□□ -1.72
CHRNA3P32297 AC090751.1-201ENST00000566966 267 ntBASIC4.31□□□□□ -1.72
CHRNA3P32297 AC079171.1-201ENST00000568788 914 ntBASIC4.31□□□□□ -1.72
CHRNA3P32297 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC4.31□□□□□ -1.72
CHRNA3P32297 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC4.31□□□□□ -1.72
CHRNA3P32297 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.31□□□□□ -1.72
CHRNA3P32297 OR6R2P-201ENST00000609216 300 ntBASIC4.31□□□□□ -1.72
CHRNA3P32297 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.31□□□□□ -1.72
CHRNA3P32297 MIR1264-201ENST00000616374 69 ntBASIC4.31□□□□□ -1.72
CHRNA3P32297 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.31□□□□□ -1.72
CHRNA3P32297 AC020923.1-201ENST00000624021 917 ntBASIC4.31□□□□□ -1.72
CHRNA3P32297 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.31□□□□□ -1.72
CHRNA3P32297 ATE1-AS1-202ENST00000636460 506 ntBASIC4.31□□□□□ -1.72
CHRNA3P32297 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CHRNA3P32297 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CHRNA3P32297 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.31□□□□□ -1.72
CHRNA3P32297 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.31□□□□□ -1.72
CHRNA3P32297 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.31□□□□□ -1.72
CHRNA3P32297 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CHRNA3P32297 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CHRNA3P32297 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
CHRNA3P32297 AL133243.3-201ENST00000617415 3004 ntBASIC4.3□□□□□ -1.72
CHRNA3P32297 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CHRNA3P32297 ERCC6-202ENST00000374127 1782 ntBASIC4.3□□□□□ -1.72
CHRNA3P32297 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.3□□□□□ -1.72
CHRNA3P32297 AC017007.4-201ENST00000503353 1352 ntBASIC4.3□□□□□ -1.72
CHRNA3P32297 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
CHRNA3P32297 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms