Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.54□□□□□ -1.52
PTPN1P18031 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
PTPN1P18031 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PTPN1P18031 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.54□□□□□ -1.52
PTPN1P18031 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
PTPN1P18031 EED-206ENST00000527888 1422 ntTSL 2 BASIC5.54□□□□□ -1.52
PTPN1P18031 AC023421.1-201ENST00000590535 1785 ntBASIC5.54□□□□□ -1.52
PTPN1P18031 GVINP1-202ENST00000531871 7271 ntBASIC5.54□□□□□ -1.52
PTPN1P18031 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.54□□□□□ -1.52
PTPN1P18031 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
PTPN1P18031 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
PTPN1P18031 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
PTPN1P18031 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.54□□□□□ -1.52
PTPN1P18031 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.54□□□□□ -1.52
PTPN1P18031 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PTPN1P18031 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
PTPN1P18031 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PTPN1P18031 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
PTPN1P18031 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PTPN1P18031 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PTPN1P18031 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC5.53□□□□□ -1.52
PTPN1P18031 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PTPN1P18031 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.53□□□□□ -1.52
PTPN1P18031 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
PTPN1P18031 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PTPN1P18031 OR4G2P-201ENST00000328113 903 ntBASIC5.53□□□□□ -1.52
PTPN1P18031 RNA5SP507-201ENST00000363603 121 ntBASIC5.53□□□□□ -1.52
PTPN1P18031 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PTPN1P18031 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PTPN1P18031 RNU6-225P-201ENST00000384613 103 ntBASIC5.53□□□□□ -1.52
PTPN1P18031 MIR589-201ENST00000385238 99 ntBASIC5.53□□□□□ -1.52
PTPN1P18031 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
PTPN1P18031 RNU6-272P-201ENST00000411028 104 ntBASIC5.53□□□□□ -1.52
PTPN1P18031 RNU2-6P-201ENST00000411404 190 ntBASIC5.53□□□□□ -1.52
PTPN1P18031 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC5.53□□□□□ -1.52
PTPN1P18031 RPL23AP27-201ENST00000415161 451 ntBASIC5.53□□□□□ -1.52
PTPN1P18031 AL389915.1-201ENST00000422463 466 ntBASIC5.53□□□□□ -1.52
PTPN1P18031 HMGN2P27-201ENST00000427352 270 ntBASIC5.53□□□□□ -1.52
PTPN1P18031 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC5.53□□□□□ -1.52
PTPN1P18031 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.53□□□□□ -1.52
PTPN1P18031 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC5.53□□□□□ -1.52
PTPN1P18031 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC5.53□□□□□ -1.52
PTPN1P18031 AL831737.1-201ENST00000441288 271 ntBASIC5.53□□□□□ -1.52
PTPN1P18031 AC092647.2-201ENST00000452998 253 ntBASIC5.53□□□□□ -1.52
PTPN1P18031 RPL18AP17-201ENST00000455326 198 ntBASIC5.53□□□□□ -1.52
PTPN1P18031 AC108161.1-201ENST00000461060 402 ntBASIC5.53□□□□□ -1.52
PTPN1P18031 RPL23AP12-201ENST00000467573 473 ntBASIC5.53□□□□□ -1.52
PTPN1P18031 TMED11P-201ENST00000479478 690 ntBASIC5.53□□□□□ -1.52
PTPN1P18031 RPSAP50-201ENST00000481955 852 ntBASIC5.53□□□□□ -1.52
PTPN1P18031 EIF3KP3-201ENST00000514461 639 ntBASIC5.53□□□□□ -1.52
PTPN1P18031 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.53□□□□□ -1.52
PTPN1P18031 RGS5-218ENST00000526176 574 ntTSL 4 BASIC5.53□□□□□ -1.52
PTPN1P18031 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.53□□□□□ -1.52
PTPN1P18031 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.53□□□□□ -1.52
PTPN1P18031 HMGN2P6-201ENST00000551091 273 ntBASIC5.53□□□□□ -1.52
PTPN1P18031 AC044860.2-201ENST00000561005 179 ntBASIC5.53□□□□□ -1.52
PTPN1P18031 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.53□□□□□ -1.52
PTPN1P18031 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC5.53□□□□□ -1.52
PTPN1P18031 RN7SL708P-201ENST00000580952 299 ntBASIC5.53□□□□□ -1.52
PTPN1P18031 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC5.53□□□□□ -1.52
PTPN1P18031 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC5.53□□□□□ -1.52
PTPN1P18031 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC5.53□□□□□ -1.52
PTPN1P18031 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.53□□□□□ -1.52
PTPN1P18031 AC005084.1-201ENST00000605160 304 ntBASIC5.53□□□□□ -1.52
PTPN1P18031 RNU6-88P-201ENST00000606801 100 ntBASIC5.53□□□□□ -1.52
PTPN1P18031 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC5.53□□□□□ -1.52
PTPN1P18031 RPSAP73-201ENST00000614820 330 ntBASIC5.53□□□□□ -1.52
PTPN1P18031 U4.5-201ENST00000617137 123 ntBASIC5.53□□□□□ -1.52
PTPN1P18031 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
PTPN1P18031 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PTPN1P18031 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PTPN1P18031 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.53□□□□□ -1.52
PTPN1P18031 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PTPN1P18031 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
PTPN1P18031 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.53□□□□□ -1.52
PTPN1P18031 AC114947.2-201ENST00000565748 2125 ntBASIC5.53□□□□□ -1.52
PTPN1P18031 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PTPN1P18031 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.52□□□□□ -1.53
PTPN1P18031 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
PTPN1P18031 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
PTPN1P18031 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PTPN1P18031 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
PTPN1P18031 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.52□□□□□ -1.53
PTPN1P18031 RNY4P24-201ENST00000362735 96 ntBASIC5.52□□□□□ -1.53
PTPN1P18031 OR1L6-202ENST00000373684 1044 ntBASIC5.52□□□□□ -1.53
PTPN1P18031 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PTPN1P18031 RNU1-74P-201ENST00000384108 171 ntBASIC5.52□□□□□ -1.53
PTPN1P18031 SNORA70-201ENST00000384436 135 ntBASIC5.52□□□□□ -1.53
PTPN1P18031 RNU6-1122P-201ENST00000384449 107 ntBASIC5.52□□□□□ -1.53
PTPN1P18031 RNA5SP241-201ENST00000391326 114 ntBASIC5.52□□□□□ -1.53
PTPN1P18031 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.52□□□□□ -1.53
PTPN1P18031 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.52□□□□□ -1.53
PTPN1P18031 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.52□□□□□ -1.53
PTPN1P18031 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC5.52□□□□□ -1.53
PTPN1P18031 AC092634.6-201ENST00000418558 192 ntBASIC5.52□□□□□ -1.53
PTPN1P18031 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC5.52□□□□□ -1.53
PTPN1P18031 MTCO3P1-205ENST00000422088 832 ntBASIC5.52□□□□□ -1.53
PTPN1P18031 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.52□□□□□ -1.53
PTPN1P18031 ISCA1P1-201ENST00000426679 387 ntBASIC5.52□□□□□ -1.53
PTPN1P18031 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms