Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 BOLA3P3-201ENST00000505182 232 ntBASIC4.55□□□□□ -1.68
PCNAP12004 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.55□□□□□ -1.68
PCNAP12004 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PCNAP12004 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC4.55□□□□□ -1.68
PCNAP12004 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC4.55□□□□□ -1.68
PCNAP12004 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.55□□□□□ -1.68
PCNAP12004 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.55□□□□□ -1.68
PCNAP12004 AP001880.2-201ENST00000538233 448 ntBASIC4.55□□□□□ -1.68
PCNAP12004 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.55□□□□□ -1.68
PCNAP12004 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.55□□□□□ -1.68
PCNAP12004 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.55□□□□□ -1.68
PCNAP12004 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.55□□□□□ -1.68
PCNAP12004 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.55□□□□□ -1.68
PCNAP12004 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC4.55□□□□□ -1.68
PCNAP12004 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.55□□□□□ -1.68
PCNAP12004 MIR4716-201ENST00000579628 84 ntBASIC4.55□□□□□ -1.68
PCNAP12004 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.55□□□□□ -1.68
PCNAP12004 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.55□□□□□ -1.68
PCNAP12004 AL031320.1-201ENST00000604177 357 ntBASIC4.55□□□□□ -1.68
PCNAP12004 AC021749.1-201ENST00000604322 607 ntBASIC4.55□□□□□ -1.68
PCNAP12004 AL139344.1-201ENST00000605228 195 ntBASIC4.55□□□□□ -1.68
PCNAP12004 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.55□□□□□ -1.68
PCNAP12004 AC211433.2-201ENST00000608433 387 ntBASIC4.55□□□□□ -1.68
PCNAP12004 AP004247.3-201ENST00000608682 624 ntBASIC4.55□□□□□ -1.68
PCNAP12004 AC107075.1-201ENST00000613695 314 ntBASIC4.55□□□□□ -1.68
PCNAP12004 AC105227.2-201ENST00000615075 605 ntBASIC4.55□□□□□ -1.68
PCNAP12004 MIR7155-201ENST00000615925 56 ntBASIC4.55□□□□□ -1.68
PCNAP12004 MIR6719-201ENST00000622428 87 ntBASIC4.55□□□□□ -1.68
PCNAP12004 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.55□□□□□ -1.68
PCNAP12004 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.55□□□□□ -1.68
PCNAP12004 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC4.55□□□□□ -1.68
PCNAP12004 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.55□□□□□ -1.68
PCNAP12004 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
PCNAP12004 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PCNAP12004 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.55□□□□□ -1.68
PCNAP12004 KPNA2P2-201ENST00000419546 1489 ntBASIC4.55□□□□□ -1.68
PCNAP12004 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.55□□□□□ -1.68
PCNAP12004 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
PCNAP12004 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
PCNAP12004 AL139811.1-201ENST00000424779 2299 ntBASIC4.55□□□□□ -1.68
PCNAP12004 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.54□□□□□ -1.68
PCNAP12004 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
PCNAP12004 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PCNAP12004 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.54□□□□□ -1.68
PCNAP12004 AC027290.2-201ENST00000623210 18662 ntBASIC4.54□□□□□ -1.68
PCNAP12004 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
PCNAP12004 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PCNAP12004 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.54□□□□□ -1.68
PCNAP12004 RNU6-619P-201ENST00000365146 108 ntBASIC4.54□□□□□ -1.68
PCNAP12004 RNU6-83P-201ENST00000384568 112 ntBASIC4.54□□□□□ -1.68
PCNAP12004 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.54□□□□□ -1.68
PCNAP12004 AL591848.1-201ENST00000413092 322 ntBASIC4.54□□□□□ -1.68
PCNAP12004 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.54□□□□□ -1.68
PCNAP12004 TRGV6-201ENST00000417928 299 ntBASIC4.54□□□□□ -1.68
PCNAP12004 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.54□□□□□ -1.68
PCNAP12004 AL645608.4-201ENST00000423619 154 ntBASIC4.54□□□□□ -1.68
PCNAP12004 RPL7P34-201ENST00000433316 712 ntBASIC4.54□□□□□ -1.68
PCNAP12004 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PCNAP12004 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.54□□□□□ -1.68
PCNAP12004 RPL23AP76-201ENST00000441860 458 ntBASIC4.54□□□□□ -1.68
PCNAP12004 AC004865.1-201ENST00000442276 1003 ntBASIC4.54□□□□□ -1.68
PCNAP12004 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC4.54□□□□□ -1.68
PCNAP12004 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC4.54□□□□□ -1.68
PCNAP12004 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC4.54□□□□□ -1.68
PCNAP12004 AC011979.1-201ENST00000472300 483 ntBASIC4.54□□□□□ -1.68
PCNAP12004 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PCNAP12004 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PCNAP12004 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.54□□□□□ -1.68
PCNAP12004 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC4.54□□□□□ -1.68
PCNAP12004 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
PCNAP12004 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.54□□□□□ -1.68
PCNAP12004 UBTFL10-201ENST00000528532 562 ntBASIC4.54□□□□□ -1.68
PCNAP12004 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
PCNAP12004 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4.54□□□□□ -1.68
PCNAP12004 AC079075.1-201ENST00000559543 878 ntBASIC4.54□□□□□ -1.68
PCNAP12004 AC009117.1-201ENST00000563948 554 ntBASIC4.54□□□□□ -1.68
PCNAP12004 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC4.54□□□□□ -1.68
PCNAP12004 MIR3912-201ENST00000577566 105 ntBASIC4.54□□□□□ -1.68
PCNAP12004 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.54□□□□□ -1.68
PCNAP12004 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC4.54□□□□□ -1.68
PCNAP12004 VN1R84P-201ENST00000593697 235 ntBASIC4.54□□□□□ -1.68
PCNAP12004 NIFKP6-201ENST00000598115 845 ntBASIC4.54□□□□□ -1.68
PCNAP12004 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.54□□□□□ -1.68
PCNAP12004 AL353778.1-201ENST00000603149 408 ntBASIC4.54□□□□□ -1.68
PCNAP12004 AC025811.1-201ENST00000604312 472 ntBASIC4.54□□□□□ -1.68
PCNAP12004 AL390816.3-201ENST00000604527 1066 ntBASIC4.54□□□□□ -1.68
PCNAP12004 AP000255.1-201ENST00000610276 676 ntBASIC4.54□□□□□ -1.68
PCNAP12004 AC087385.3-201ENST00000620477 187 ntBASIC4.54□□□□□ -1.68
PCNAP12004 AC005086.4-201ENST00000623065 213 ntBASIC4.54□□□□□ -1.68
PCNAP12004 AP002782.1-201ENST00000623107 614 ntBASIC4.54□□□□□ -1.68
PCNAP12004 AL359757.1-201ENST00000623176 255 ntBASIC4.54□□□□□ -1.68
PCNAP12004 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.54□□□□□ -1.68
PCNAP12004 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC4.54□□□□□ -1.68
PCNAP12004 AL355852.1-201ENST00000454081 1771 ntBASIC4.54□□□□□ -1.68
PCNAP12004 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
PCNAP12004 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.54□□□□□ -1.68
PCNAP12004 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
PCNAP12004 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PCNAP12004 AC131971.1-201ENST00000332881 1482 ntBASIC4.54□□□□□ -1.68
PCNAP12004 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms