Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.25□□□□□ -1.89
FREM3P0C091 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC3.25□□□□□ -1.89
FREM3P0C091 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
FREM3P0C091 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.25□□□□□ -1.89
FREM3P0C091 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.25□□□□□ -1.89
FREM3P0C091 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
FREM3P0C091 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.24□□□□□ -1.89
FREM3P0C091 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
FREM3P0C091 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.24□□□□□ -1.89
FREM3P0C091 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
FREM3P0C091 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.24□□□□□ -1.89
FREM3P0C091 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
FREM3P0C091 MIR200C-201ENST00000384980 68 ntBASIC3.24□□□□□ -1.89
FREM3P0C091 AC007068.1-201ENST00000396690 844 ntBASIC3.24□□□□□ -1.89
FREM3P0C091 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3.24□□□□□ -1.89
FREM3P0C091 AL357552.1-201ENST00000445254 415 ntBASIC3.24□□□□□ -1.89
FREM3P0C091 OR52Y1P-201ENST00000452418 828 ntBASIC3.24□□□□□ -1.89
FREM3P0C091 UBA52P3-201ENST00000491303 382 ntBASIC3.24□□□□□ -1.89
FREM3P0C091 AC005798.1-201ENST00000513715 387 ntBASIC3.24□□□□□ -1.89
FREM3P0C091 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.24□□□□□ -1.89
FREM3P0C091 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.24□□□□□ -1.89
FREM3P0C091 ELOCP35-201ENST00000604289 336 ntBASIC3.24□□□□□ -1.89
FREM3P0C091 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.24□□□□□ -1.89
FREM3P0C091 AC138932.5-201ENST00000617759 563 ntBASIC3.24□□□□□ -1.89
FREM3P0C091 AC067931.1-201ENST00000624190 671 ntBASIC3.24□□□□□ -1.89
FREM3P0C091 AC127502.3-201ENST00000636170 1206 ntBASIC3.24□□□□□ -1.89
FREM3P0C091 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
FREM3P0C091 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
FREM3P0C091 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
FREM3P0C091 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.24□□□□□ -1.89
FREM3P0C091 MIR183-201ENST00000384958 110 ntBASIC3.23□□□□□ -1.89
FREM3P0C091 MTHFD2P2-201ENST00000407725 247 ntBASIC3.23□□□□□ -1.89
FREM3P0C091 RN7SKP56-201ENST00000410513 331 ntBASIC3.23□□□□□ -1.89
FREM3P0C091 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.23□□□□□ -1.89
FREM3P0C091 RPS7P15-201ENST00000415804 584 ntBASIC3.23□□□□□ -1.89
FREM3P0C091 AC008280.1-201ENST00000418851 412 ntBASIC3.23□□□□□ -1.89
FREM3P0C091 AL591419.1-201ENST00000427423 339 ntBASIC3.23□□□□□ -1.89
FREM3P0C091 CYCSP4-201ENST00000429682 331 ntBASIC3.23□□□□□ -1.89
FREM3P0C091 MOB1AP1-201ENST00000430903 535 ntBASIC3.23□□□□□ -1.89
FREM3P0C091 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.23□□□□□ -1.89
FREM3P0C091 RPS4XP10-201ENST00000465034 731 ntBASIC3.23□□□□□ -1.89
FREM3P0C091 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
FREM3P0C091 AC004069.2-201ENST00000505438 1114 ntBASIC3.23□□□□□ -1.89
FREM3P0C091 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.23□□□□□ -1.89
FREM3P0C091 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.23□□□□□ -1.89
FREM3P0C091 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.23□□□□□ -1.89
FREM3P0C091 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.23□□□□□ -1.89
FREM3P0C091 SNORD39.4-201ENST00000620099 78 ntBASIC3.23□□□□□ -1.89
FREM3P0C091 AC018816.2-201ENST00000621460 353 ntBASIC3.23□□□□□ -1.89
FREM3P0C091 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
FREM3P0C091 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
FREM3P0C091 SAGE2P-201ENST00000420011 2126 ntBASIC3.23□□□□□ -1.89
FREM3P0C091 AC083899.2-201ENST00000423285 1376 ntBASIC3.23□□□□□ -1.89
FREM3P0C091 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
FREM3P0C091 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.23□□□□□ -1.89
FREM3P0C091 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
FREM3P0C091 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
FREM3P0C091 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.23□□□□□ -1.89
FREM3P0C091 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
FREM3P0C091 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
FREM3P0C091 AL391417.1-201ENST00000404100 426 ntBASIC3.23□□□□□ -1.89
FREM3P0C091 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC3.23□□□□□ -1.89
FREM3P0C091 AL158071.1-201ENST00000430315 461 ntBASIC3.23□□□□□ -1.89
FREM3P0C091 SKP1P1-201ENST00000438081 489 ntBASIC3.23□□□□□ -1.89
FREM3P0C091 AC006480.1-201ENST00000449887 378 ntBASIC3.23□□□□□ -1.89
FREM3P0C091 AL591363.1-201ENST00000450091 483 ntBASIC3.23□□□□□ -1.89
FREM3P0C091 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.23□□□□□ -1.89
FREM3P0C091 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.23□□□□□ -1.89
FREM3P0C091 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.23□□□□□ -1.89
FREM3P0C091 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.23□□□□□ -1.89
FREM3P0C091 FTH1P24-201ENST00000503502 462 ntBASIC3.23□□□□□ -1.89
FREM3P0C091 LDHBP3-201ENST00000514909 822 ntBASIC3.23□□□□□ -1.89
FREM3P0C091 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC3.23□□□□□ -1.89
FREM3P0C091 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC3.23□□□□□ -1.89
FREM3P0C091 AC090281.1-201ENST00000523019 276 ntBASIC3.23□□□□□ -1.89
FREM3P0C091 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.23□□□□□ -1.89
FREM3P0C091 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.23□□□□□ -1.89
FREM3P0C091 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.23□□□□□ -1.89
FREM3P0C091 AC006077.1-201ENST00000604746 343 ntBASIC3.23□□□□□ -1.89
FREM3P0C091 AC006840.1-201ENST00000623069 542 ntBASIC3.23□□□□□ -1.89
FREM3P0C091 AL031985.3-201ENST00000565390 2449 ntBASIC3.23□□□□□ -1.89
FREM3P0C091 MTCO1P22-201ENST00000604619 1360 ntBASIC3.23□□□□□ -1.89
FREM3P0C091 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
FREM3P0C091 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
FREM3P0C091 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
FREM3P0C091 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
FREM3P0C091 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.23□□□□□ -1.89
FREM3P0C091 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
FREM3P0C091 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
FREM3P0C091 MTND5P23-201ENST00000430812 1655 ntBASIC3.22□□□□□ -1.89
FREM3P0C091 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
FREM3P0C091 PRO1804-201ENST00000623780 2050 ntBASIC3.22□□□□□ -1.89
FREM3P0C091 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
FREM3P0C091 AC002524.1-201ENST00000411687 547 ntBASIC3.22□□□□□ -1.89
FREM3P0C091 AL691447.1-201ENST00000419456 387 ntBASIC3.22□□□□□ -1.89
FREM3P0C091 AL035423.1-201ENST00000420331 213 ntBASIC3.22□□□□□ -1.89
FREM3P0C091 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.22□□□□□ -1.89
FREM3P0C091 NPM1P17-201ENST00000479221 602 ntBASIC3.22□□□□□ -1.89
FREM3P0C091 RANP9-201ENST00000519957 271 ntBASIC3.22□□□□□ -1.89
FREM3P0C091 AP006245.1-201ENST00000522549 120 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms