Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 HSPE1P22-201ENST00000456856 327 ntBASIC5.68□□□□□ -1.5
SNRPA1P09661 RNU7-125P-201ENST00000458760 62 ntBASIC5.68□□□□□ -1.5
SNRPA1P09661 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.68□□□□□ -1.5
SNRPA1P09661 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC5.68□□□□□ -1.5
SNRPA1P09661 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SNRPA1P09661 MTCO1P49-201ENST00000523429 802 ntBASIC5.68□□□□□ -1.5
SNRPA1P09661 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC5.68□□□□□ -1.5
SNRPA1P09661 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC5.68□□□□□ -1.5
SNRPA1P09661 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.68□□□□□ -1.5
SNRPA1P09661 CASP1-216ENST00000534497 825 ntTSL 5 BASIC5.68□□□□□ -1.5
SNRPA1P09661 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC5.68□□□□□ -1.5
SNRPA1P09661 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC5.68□□□□□ -1.5
SNRPA1P09661 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC5.68□□□□□ -1.5
SNRPA1P09661 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.68□□□□□ -1.5
SNRPA1P09661 RN7SL176P-201ENST00000580352 264 ntBASIC5.68□□□□□ -1.5
SNRPA1P09661 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC5.68□□□□□ -1.5
SNRPA1P09661 AL583856.2-201ENST00000606298 543 ntBASIC5.68□□□□□ -1.5
SNRPA1P09661 OR2AS2P-201ENST00000606902 342 ntBASIC5.68□□□□□ -1.5
SNRPA1P09661 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
SNRPA1P09661 FRG1HP-204ENST00000617940 757 ntBASIC5.68□□□□□ -1.5
SNRPA1P09661 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
SNRPA1P09661 AC006840.1-201ENST00000623069 542 ntBASIC5.68□□□□□ -1.5
SNRPA1P09661 AC140479.6-201ENST00000633535 357 ntBASIC5.68□□□□□ -1.5
SNRPA1P09661 AL606537.1-201ENST00000607258 2011 ntBASIC5.68□□□□□ -1.5
SNRPA1P09661 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
SNRPA1P09661 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.68□□□□□ -1.5
SNRPA1P09661 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SNRPA1P09661 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SNRPA1P09661 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SNRPA1P09661 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.67□□□□□ -1.5
SNRPA1P09661 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.67□□□□□ -1.5
SNRPA1P09661 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
SNRPA1P09661 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.67□□□□□ -1.5
SNRPA1P09661 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SNRPA1P09661 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
SNRPA1P09661 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SNRPA1P09661 SPATA2P1-201ENST00000431223 2055 ntBASIC5.67□□□□□ -1.5
SNRPA1P09661 TTC39DP-201ENST00000416781 1688 ntBASIC5.67□□□□□ -1.5
SNRPA1P09661 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SNRPA1P09661 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.67□□□□□ -1.5
SNRPA1P09661 RNU6-413P-201ENST00000384115 107 ntBASIC5.67□□□□□ -1.5
SNRPA1P09661 RPS26P8-201ENST00000393490 348 ntBASIC5.67□□□□□ -1.5
SNRPA1P09661 RN7SKP263-201ENST00000411194 309 ntBASIC5.67□□□□□ -1.5
SNRPA1P09661 BTF3L4P1-201ENST00000413813 468 ntBASIC5.67□□□□□ -1.5
SNRPA1P09661 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC5.67□□□□□ -1.5
SNRPA1P09661 RPL23AP52-201ENST00000439311 478 ntBASIC5.67□□□□□ -1.5
SNRPA1P09661 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC5.67□□□□□ -1.5
SNRPA1P09661 AL133477.1-201ENST00000457472 514 ntBASIC5.67□□□□□ -1.5
SNRPA1P09661 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC5.67□□□□□ -1.5
SNRPA1P09661 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC5.67□□□□□ -1.5
SNRPA1P09661 AC111000.2-201ENST00000507775 550 ntBASIC5.67□□□□□ -1.5
SNRPA1P09661 AC108475.1-201ENST00000507880 950 ntBASIC5.67□□□□□ -1.5
SNRPA1P09661 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC5.67□□□□□ -1.5
SNRPA1P09661 MTCYBP16-201ENST00000509187 1129 ntBASIC5.67□□□□□ -1.5
SNRPA1P09661 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC5.67□□□□□ -1.5
SNRPA1P09661 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC5.67□□□□□ -1.5
SNRPA1P09661 AC084824.1-201ENST00000550917 1005 ntBASIC5.67□□□□□ -1.5
SNRPA1P09661 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SNRPA1P09661 AC022662.1-201ENST00000580252 331 ntBASIC5.67□□□□□ -1.5
SNRPA1P09661 AC091178.1-203ENST00000584586 279 ntBASIC5.67□□□□□ -1.5
SNRPA1P09661 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SNRPA1P09661 AL020997.2-201ENST00000602607 184 ntBASIC5.67□□□□□ -1.5
SNRPA1P09661 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC5.67□□□□□ -1.5
SNRPA1P09661 COX6CP4-201ENST00000605798 228 ntBASIC5.67□□□□□ -1.5
SNRPA1P09661 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC5.67□□□□□ -1.5
SNRPA1P09661 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.67□□□□□ -1.5
SNRPA1P09661 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.67□□□□□ -1.5
SNRPA1P09661 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
SNRPA1P09661 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SNRPA1P09661 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SNRPA1P09661 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
SNRPA1P09661 AL158163.1-201ENST00000603915 1649 ntBASIC5.66□□□□□ -1.5
SNRPA1P09661 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.66□□□□□ -1.5
SNRPA1P09661 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC5.66□□□□□ -1.5
SNRPA1P09661 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
SNRPA1P09661 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SNRPA1P09661 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SNRPA1P09661 NXPH1-205ENST00000602349 1953 ntBASIC5.66□□□□□ -1.5
SNRPA1P09661 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC5.66□□□□□ -1.5
SNRPA1P09661 NACA3P-201ENST00000359690 648 ntBASIC5.66□□□□□ -1.5
SNRPA1P09661 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SNRPA1P09661 SNORA40.2-201ENST00000390847 128 ntBASIC5.66□□□□□ -1.5
SNRPA1P09661 SNORA57.1-201ENST00000391227 145 ntBASIC5.66□□□□□ -1.5
SNRPA1P09661 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.66□□□□□ -1.5
SNRPA1P09661 RPL7P53-201ENST00000421245 739 ntBASIC5.66□□□□□ -1.5
SNRPA1P09661 AL365203.2-201ENST00000423444 196 ntBASIC5.66□□□□□ -1.5
SNRPA1P09661 Z74021.1-201ENST00000423610 407 ntBASIC5.66□□□□□ -1.5
SNRPA1P09661 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC5.66□□□□□ -1.5
SNRPA1P09661 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC5.66□□□□□ -1.5
SNRPA1P09661 AC092170.1-201ENST00000440211 356 ntBASIC5.66□□□□□ -1.5
SNRPA1P09661 MTND5P2-201ENST00000442927 1142 ntBASIC5.66□□□□□ -1.5
SNRPA1P09661 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC5.66□□□□□ -1.5
SNRPA1P09661 AC114755.5-201ENST00000447760 831 ntBASIC5.66□□□□□ -1.5
SNRPA1P09661 AC092685.1-201ENST00000447960 1243 ntBASIC5.66□□□□□ -1.5
SNRPA1P09661 NPM1P13-201ENST00000452663 865 ntBASIC5.66□□□□□ -1.5
SNRPA1P09661 CALM1P2-201ENST00000452941 448 ntBASIC5.66□□□□□ -1.5
SNRPA1P09661 AC091860.1-201ENST00000505723 432 ntBASIC5.66□□□□□ -1.5
SNRPA1P09661 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC5.66□□□□□ -1.5
SNRPA1P09661 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.66□□□□□ -1.5
SNRPA1P09661 NDUFB4P12-201ENST00000513465 390 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms