Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC2.86□□□□□ -1.95
CXCL1P09341 AP003072.4-201ENST00000624580 310 ntBASIC2.86□□□□□ -1.95
CXCL1P09341 TEX41-280ENST00000629185 591 ntTSL 5 BASIC2.86□□□□□ -1.95
CXCL1P09341 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
CXCL1P09341 FER-202ENST00000438717 1531 ntTSL 2 BASIC2.86□□□□□ -1.95
CXCL1P09341 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CXCL1P09341 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
CXCL1P09341 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
CXCL1P09341 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
CXCL1P09341 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CXCL1P09341 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CXCL1P09341 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC2.85□□□□□ -1.95
CXCL1P09341 RNVU1-6-201ENST00000364688 164 ntBASIC2.85□□□□□ -1.95
CXCL1P09341 ENSAP1-201ENST00000392855 326 ntBASIC2.85□□□□□ -1.95
CXCL1P09341 RPS16P5-201ENST00000406501 404 ntBASIC2.85□□□□□ -1.95
CXCL1P09341 AL583834.1-201ENST00000406943 343 ntBASIC2.85□□□□□ -1.95
CXCL1P09341 ELOCP19-201ENST00000411919 318 ntBASIC2.85□□□□□ -1.95
CXCL1P09341 TPT1P2-201ENST00000413105 503 ntBASIC2.85□□□□□ -1.95
CXCL1P09341 AC011933.1-201ENST00000413334 321 ntBASIC2.85□□□□□ -1.95
CXCL1P09341 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC2.85□□□□□ -1.95
CXCL1P09341 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC2.85□□□□□ -1.95
CXCL1P09341 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CXCL1P09341 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC2.85□□□□□ -1.95
CXCL1P09341 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC2.85□□□□□ -1.95
CXCL1P09341 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC2.85□□□□□ -1.95
CXCL1P09341 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC2.85□□□□□ -1.95
CXCL1P09341 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC2.85□□□□□ -1.95
CXCL1P09341 AC006480.1-201ENST00000449887 378 ntBASIC2.85□□□□□ -1.95
CXCL1P09341 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
CXCL1P09341 AC116533.1-201ENST00000459748 321 ntBASIC2.85□□□□□ -1.95
CXCL1P09341 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC2.85□□□□□ -1.95
CXCL1P09341 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC2.85□□□□□ -1.95
CXCL1P09341 FABP5P12-201ENST00000515543 389 ntBASIC2.85□□□□□ -1.95
CXCL1P09341 MIR2276-201ENST00000516886 89 ntBASIC2.85□□□□□ -1.95
CXCL1P09341 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC2.85□□□□□ -1.95
CXCL1P09341 AC104027.1-201ENST00000521887 300 ntBASIC2.85□□□□□ -1.95
CXCL1P09341 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC2.85□□□□□ -1.95
CXCL1P09341 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CXCL1P09341 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CXCL1P09341 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC2.85□□□□□ -1.95
CXCL1P09341 HIGD1AP10-201ENST00000527837 282 ntBASIC2.85□□□□□ -1.95
CXCL1P09341 OR4A12P-201ENST00000530847 918 ntBASIC2.85□□□□□ -1.95
CXCL1P09341 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC2.85□□□□□ -1.95
CXCL1P09341 PSMB7P1-201ENST00000556349 514 ntBASIC2.85□□□□□ -1.95
CXCL1P09341 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC2.85□□□□□ -1.95
CXCL1P09341 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC2.85□□□□□ -1.95
CXCL1P09341 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC2.85□□□□□ -1.95
CXCL1P09341 BNIP3P38-201ENST00000601117 544 ntBASIC2.85□□□□□ -1.95
CXCL1P09341 MIR8059-201ENST00000620427 81 ntBASIC2.85□□□□□ -1.95
CXCL1P09341 AC010608.2-201ENST00000624830 470 ntBASIC2.85□□□□□ -1.95
CXCL1P09341 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CXCL1P09341 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.85□□□□□ -1.95
CXCL1P09341 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
CXCL1P09341 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CXCL1P09341 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC2.84□□□□□ -1.95
CXCL1P09341 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.95
CXCL1P09341 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CXCL1P09341 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
CXCL1P09341 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC2.84□□□□□ -1.95
CXCL1P09341 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC2.84□□□□□ -1.95
CXCL1P09341 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CXCL1P09341 AL133383.2-201ENST00000622958 2336 ntBASIC2.84□□□□□ -1.95
CXCL1P09341 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
CXCL1P09341 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
CXCL1P09341 SNORD56.3-201ENST00000363507 71 ntBASIC2.84□□□□□ -1.95
CXCL1P09341 RNA5SP42-201ENST00000364278 115 ntBASIC2.84□□□□□ -1.95
CXCL1P09341 MIR124-3-201ENST00000384866 87 ntBASIC2.84□□□□□ -1.95
CXCL1P09341 MIR550A3-201ENST00000390735 95 ntBASIC2.84□□□□□ -1.95
CXCL1P09341 AC092642.1-201ENST00000392417 425 ntBASIC2.84□□□□□ -1.95
CXCL1P09341 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.84□□□□□ -1.95
CXCL1P09341 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC2.84□□□□□ -1.95
CXCL1P09341 AL691447.1-201ENST00000419456 387 ntBASIC2.84□□□□□ -1.95
CXCL1P09341 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC2.84□□□□□ -1.95
CXCL1P09341 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC2.84□□□□□ -1.95
CXCL1P09341 RPL23AP69-201ENST00000431134 458 ntBASIC2.84□□□□□ -1.95
CXCL1P09341 MTCO1P52-201ENST00000433928 531 ntBASIC2.84□□□□□ -1.95
CXCL1P09341 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CXCL1P09341 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC2.84□□□□□ -1.95
CXCL1P09341 AL162151.2-201ENST00000448875 158 ntBASIC2.84□□□□□ -1.95
CXCL1P09341 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC2.84□□□□□ -1.95
CXCL1P09341 RPL9P32-201ENST00000464118 620 ntBASIC2.84□□□□□ -1.95
CXCL1P09341 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC2.84□□□□□ -1.95
CXCL1P09341 RN7SL303P-201ENST00000469773 251 ntBASIC2.84□□□□□ -1.95
CXCL1P09341 AC022336.1-201ENST00000475510 337 ntBASIC2.84□□□□□ -1.95
CXCL1P09341 HMGB3P14-201ENST00000494195 599 ntBASIC2.84□□□□□ -1.95
CXCL1P09341 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC2.84□□□□□ -1.95
CXCL1P09341 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC2.84□□□□□ -1.95
CXCL1P09341 RAC1P2-201ENST00000511164 579 ntBASIC2.84□□□□□ -1.95
CXCL1P09341 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC2.84□□□□□ -1.95
CXCL1P09341 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC2.84□□□□□ -1.95
CXCL1P09341 RNA5SP164-201ENST00000516533 110 ntBASIC2.84□□□□□ -1.95
CXCL1P09341 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC2.84□□□□□ -1.95
CXCL1P09341 IGHV3-76-201ENST00000522465 295 ntBASIC2.84□□□□□ -1.95
CXCL1P09341 MTND5P21-201ENST00000531961 522 ntBASIC2.84□□□□□ -1.95
CXCL1P09341 YPEL5P3-201ENST00000547227 352 ntBASIC2.84□□□□□ -1.95
CXCL1P09341 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC2.84□□□□□ -1.95
CXCL1P09341 AC063949.1-201ENST00000552900 865 ntBASIC2.84□□□□□ -1.95
CXCL1P09341 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC2.84□□□□□ -1.95
CXCL1P09341 AC006270.2-201ENST00000578523 652 ntBASIC2.84□□□□□ -1.95
CXCL1P09341 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms