Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
SMAD6O43541 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.66□□□□□ -1.66
SMAD6O43541 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.66□□□□□ -1.66
SMAD6O43541 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.66□□□□□ -1.66
SMAD6O43541 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SMAD6O43541 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SMAD6O43541 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
SMAD6O43541 SALL4P2-201ENST00000423288 2910 ntBASIC4.66□□□□□ -1.66
SMAD6O43541 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.66□□□□□ -1.66
SMAD6O43541 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
SMAD6O43541 RAD17P1-201ENST00000418130 2042 ntBASIC4.65□□□□□ -1.66
SMAD6O43541 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.65□□□□□ -1.66
SMAD6O43541 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
SMAD6O43541 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.66
SMAD6O43541 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
SMAD6O43541 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
SMAD6O43541 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
SMAD6O43541 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.65□□□□□ -1.66
SMAD6O43541 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.67
SMAD6O43541 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SMAD6O43541 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
SMAD6O43541 RNU4-92P-201ENST00000363783 136 ntBASIC4.65□□□□□ -1.67
SMAD6O43541 GSTA8P-201ENST00000404253 637 ntBASIC4.65□□□□□ -1.67
SMAD6O43541 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.65□□□□□ -1.67
SMAD6O43541 AC016397.1-201ENST00000412463 242 ntBASIC4.65□□□□□ -1.67
SMAD6O43541 MTCO1P21-201ENST00000416634 589 ntBASIC4.65□□□□□ -1.67
SMAD6O43541 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.65□□□□□ -1.67
SMAD6O43541 GAPDHP49-201ENST00000421421 961 ntBASIC4.65□□□□□ -1.67
SMAD6O43541 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC4.65□□□□□ -1.67
SMAD6O43541 AC009480.2-201ENST00000422916 432 ntBASIC4.65□□□□□ -1.67
SMAD6O43541 RPL7AP25-201ENST00000423357 805 ntBASIC4.65□□□□□ -1.67
SMAD6O43541 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SMAD6O43541 CNOT7P1-201ENST00000429006 852 ntBASIC4.65□□□□□ -1.67
SMAD6O43541 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.65□□□□□ -1.67
SMAD6O43541 NMNAT1P2-201ENST00000435192 860 ntBASIC4.65□□□□□ -1.67
SMAD6O43541 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SMAD6O43541 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.65□□□□□ -1.67
SMAD6O43541 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC4.65□□□□□ -1.67
SMAD6O43541 RPL23AP93-201ENST00000440847 484 ntBASIC4.65□□□□□ -1.67
SMAD6O43541 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.65□□□□□ -1.67
SMAD6O43541 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC4.65□□□□□ -1.67
SMAD6O43541 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SMAD6O43541 AC104651.2-201ENST00000447549 528 ntBASIC4.65□□□□□ -1.67
SMAD6O43541 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.65□□□□□ -1.67
SMAD6O43541 RPS27AP8-201ENST00000452665 445 ntBASIC4.65□□□□□ -1.67
SMAD6O43541 CALM1P2-201ENST00000452941 448 ntBASIC4.65□□□□□ -1.67
SMAD6O43541 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC4.65□□□□□ -1.67
SMAD6O43541 AC079203.1-201ENST00000487972 404 ntBASIC4.65□□□□□ -1.67
SMAD6O43541 AC021087.2-201ENST00000504656 1203 ntBASIC4.65□□□□□ -1.67
SMAD6O43541 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.65□□□□□ -1.67
SMAD6O43541 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.65□□□□□ -1.67
SMAD6O43541 C1GALT1P3-201ENST00000522049 819 ntBASIC4.65□□□□□ -1.67
SMAD6O43541 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.65□□□□□ -1.67
SMAD6O43541 OR8I1P-201ENST00000529291 931 ntBASIC4.65□□□□□ -1.67
SMAD6O43541 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SMAD6O43541 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC4.65□□□□□ -1.67
SMAD6O43541 AC087897.1-201ENST00000550134 156 ntBASIC4.65□□□□□ -1.67
SMAD6O43541 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
SMAD6O43541 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.65□□□□□ -1.67
SMAD6O43541 AC068831.4-201ENST00000556118 109 ntBASIC4.65□□□□□ -1.67
SMAD6O43541 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.65□□□□□ -1.67
SMAD6O43541 AC084757.1-201ENST00000559987 490 ntBASIC4.65□□□□□ -1.67
SMAD6O43541 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC4.65□□□□□ -1.67
SMAD6O43541 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC4.65□□□□□ -1.67
SMAD6O43541 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC4.65□□□□□ -1.67
SMAD6O43541 ELOCP28-201ENST00000590044 317 ntBASIC4.65□□□□□ -1.67
SMAD6O43541 AC130352.1-201ENST00000602979 661 ntBASIC4.65□□□□□ -1.67
SMAD6O43541 RNF138P2-201ENST00000603490 592 ntBASIC4.65□□□□□ -1.67
SMAD6O43541 AC010200.2-201ENST00000605098 235 ntBASIC4.65□□□□□ -1.67
SMAD6O43541 AC105129.3-201ENST00000605455 485 ntBASIC4.65□□□□□ -1.67
SMAD6O43541 AC245297.2-201ENST00000610119 565 ntBASIC4.65□□□□□ -1.67
SMAD6O43541 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SMAD6O43541 AL133243.1-201ENST00000614487 366 ntBASIC4.65□□□□□ -1.67
SMAD6O43541 AP006248.2-201ENST00000623309 592 ntBASIC4.65□□□□□ -1.67
SMAD6O43541 AC010435.1-201ENST00000623353 1177 ntBASIC4.65□□□□□ -1.67
SMAD6O43541 AC084035.1-201ENST00000634543 607 ntBASIC4.65□□□□□ -1.67
SMAD6O43541 MIR1322-201ENST00000638013 71 ntBASIC4.65□□□□□ -1.67
SMAD6O43541 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.65□□□□□ -1.67
SMAD6O43541 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.65□□□□□ -1.67
SMAD6O43541 Z73965.1-201ENST00000623412 2297 ntBASIC4.65□□□□□ -1.67
SMAD6O43541 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SMAD6O43541 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SMAD6O43541 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.64□□□□□ -1.67
SMAD6O43541 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SMAD6O43541 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.64□□□□□ -1.67
SMAD6O43541 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SMAD6O43541 AL356473.1-201ENST00000406203 1408 ntBASIC4.64□□□□□ -1.67
SMAD6O43541 AL359715.4-201ENST00000606629 1436 ntBASIC4.64□□□□□ -1.67
SMAD6O43541 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.64□□□□□ -1.67
SMAD6O43541 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.64□□□□□ -1.67
SMAD6O43541 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.64□□□□□ -1.67
SMAD6O43541 OR10J6P-201ENST00000289731 930 ntBASIC4.64□□□□□ -1.67
SMAD6O43541 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SMAD6O43541 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.64□□□□□ -1.67
SMAD6O43541 SNORD113-6-201ENST00000363345 75 ntBASIC4.64□□□□□ -1.67
SMAD6O43541 SNORD56.4-201ENST00000363883 71 ntBASIC4.64□□□□□ -1.67
SMAD6O43541 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
SMAD6O43541 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC4.64□□□□□ -1.67
SMAD6O43541 RPL7P27-201ENST00000403775 720 ntBASIC4.64□□□□□ -1.67
SMAD6O43541 AC022028.1-201ENST00000412054 408 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 148.4 ms