Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.98□□□□□ -1.61
PHGDHO43175 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PHGDHO43175 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.98□□□□□ -1.61
PHGDHO43175 AC117529.2-201ENST00000512159 2068 ntBASIC4.98□□□□□ -1.61
PHGDHO43175 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.98□□□□□ -1.61
PHGDHO43175 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
PHGDHO43175 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.98□□□□□ -1.61
PHGDHO43175 AC114546.3-201ENST00000623582 1734 ntBASIC4.98□□□□□ -1.61
PHGDHO43175 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.98□□□□□ -1.61
PHGDHO43175 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
PHGDHO43175 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
PHGDHO43175 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
PHGDHO43175 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
PHGDHO43175 Y_RNA.318-201ENST00000365131 97 ntBASIC4.98□□□□□ -1.61
PHGDHO43175 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC4.98□□□□□ -1.61
PHGDHO43175 SNORA70.10-201ENST00000384515 134 ntBASIC4.98□□□□□ -1.61
PHGDHO43175 MIR649-201ENST00000384843 97 ntBASIC4.98□□□□□ -1.61
PHGDHO43175 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.98□□□□□ -1.61
PHGDHO43175 SNRPEP2-201ENST00000397592 279 ntBASIC4.98□□□□□ -1.61
PHGDHO43175 AL359643.1-201ENST00000404109 423 ntBASIC4.98□□□□□ -1.61
PHGDHO43175 ZNF603P-201ENST00000405613 487 ntBASIC4.98□□□□□ -1.61
PHGDHO43175 DUTP5-201ENST00000406790 469 ntBASIC4.98□□□□□ -1.61
PHGDHO43175 MIR1271-201ENST00000408537 86 ntBASIC4.98□□□□□ -1.61
PHGDHO43175 RN7SKP126-201ENST00000411143 300 ntBASIC4.98□□□□□ -1.61
PHGDHO43175 AC073264.1-201ENST00000411508 416 ntBASIC4.98□□□□□ -1.61
PHGDHO43175 OR6C64P-201ENST00000419708 825 ntBASIC4.98□□□□□ -1.61
PHGDHO43175 AL158073.1-201ENST00000426848 1104 ntBASIC4.98□□□□□ -1.61
PHGDHO43175 AC096632.1-201ENST00000427395 310 ntBASIC4.98□□□□□ -1.61
PHGDHO43175 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.98□□□□□ -1.61
PHGDHO43175 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PHGDHO43175 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.98□□□□□ -1.61
PHGDHO43175 AL121776.1-201ENST00000429337 372 ntBASIC4.98□□□□□ -1.61
PHGDHO43175 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PHGDHO43175 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.98□□□□□ -1.61
PHGDHO43175 AL117351.1-201ENST00000438864 766 ntBASIC4.98□□□□□ -1.61
PHGDHO43175 AC092427.1-201ENST00000439177 601 ntBASIC4.98□□□□□ -1.61
PHGDHO43175 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.98□□□□□ -1.61
PHGDHO43175 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.98□□□□□ -1.61
PHGDHO43175 SPRYD7P1-201ENST00000443861 570 ntBASIC4.98□□□□□ -1.61
PHGDHO43175 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.98□□□□□ -1.61
PHGDHO43175 RPL26P28-201ENST00000451325 435 ntBASIC4.98□□□□□ -1.61
PHGDHO43175 OR6C5P-201ENST00000452388 923 ntBASIC4.98□□□□□ -1.61
PHGDHO43175 MTCO3P2-201ENST00000457365 171 ntBASIC4.98□□□□□ -1.61
PHGDHO43175 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.98□□□□□ -1.61
PHGDHO43175 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.98□□□□□ -1.61
PHGDHO43175 RPS6P4-201ENST00000494693 758 ntBASIC4.98□□□□□ -1.61
PHGDHO43175 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PHGDHO43175 HMGB3P16-201ENST00000508037 287 ntBASIC4.98□□□□□ -1.61
PHGDHO43175 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PHGDHO43175 RPL23AP53-201ENST00000521854 457 ntBASIC4.98□□□□□ -1.61
PHGDHO43175 AC107918.3-201ENST00000533272 382 ntBASIC4.98□□□□□ -1.61
PHGDHO43175 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC4.98□□□□□ -1.61
PHGDHO43175 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
PHGDHO43175 OR7K1P-201ENST00000546439 926 ntBASIC4.98□□□□□ -1.61
PHGDHO43175 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.98□□□□□ -1.61
PHGDHO43175 AC074029.1-201ENST00000552531 1044 ntBASIC4.98□□□□□ -1.61
PHGDHO43175 AL049779.2-201ENST00000553847 315 ntBASIC4.98□□□□□ -1.61
PHGDHO43175 AL389895.1-201ENST00000554127 252 ntBASIC4.98□□□□□ -1.61
PHGDHO43175 MIR4716-201ENST00000579628 84 ntBASIC4.98□□□□□ -1.61
PHGDHO43175 AC233702.9-201ENST00000581528 203 ntBASIC4.98□□□□□ -1.61
PHGDHO43175 AF131215.7-201ENST00000602443 707 ntBASIC4.98□□□□□ -1.61
PHGDHO43175 AC004987.4-201ENST00000603383 338 ntBASIC4.98□□□□□ -1.61
PHGDHO43175 AC135507.1-201ENST00000607214 561 ntBASIC4.98□□□□□ -1.61
PHGDHO43175 MIR6837-201ENST00000620884 64 ntBASIC4.98□□□□□ -1.61
PHGDHO43175 Z69908.1-201ENST00000622603 247 ntBASIC4.98□□□□□ -1.61
PHGDHO43175 AP002505.2-201ENST00000623585 696 ntBASIC4.98□□□□□ -1.61
PHGDHO43175 AC231657.1-201ENST00000624313 397 ntBASIC4.98□□□□□ -1.61
PHGDHO43175 PCMTD1P7-201ENST00000634506 357 ntBASIC4.98□□□□□ -1.61
PHGDHO43175 UOX-205ENST00000640983 544 ntTSL 4 BASIC4.98□□□□□ -1.61
PHGDHO43175 CASC19-264ENST00000641912 1184 ntBASIC4.98□□□□□ -1.61
PHGDHO43175 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
PHGDHO43175 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PHGDHO43175 LINC01355-201ENST00000566551 5444 ntBASIC4.98□□□□□ -1.61
PHGDHO43175 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PHGDHO43175 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.98□□□□□ -1.61
PHGDHO43175 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PHGDHO43175 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
PHGDHO43175 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.97□□□□□ -1.61
PHGDHO43175 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PHGDHO43175 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.97□□□□□ -1.61
PHGDHO43175 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.97□□□□□ -1.61
PHGDHO43175 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PHGDHO43175 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
PHGDHO43175 NCLP2-201ENST00000416078 1462 ntBASIC4.97□□□□□ -1.61
PHGDHO43175 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PHGDHO43175 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
PHGDHO43175 AL512422.1-201ENST00000407033 553 ntBASIC4.97□□□□□ -1.61
PHGDHO43175 OR3A2-201ENST00000408891 1076 ntBASIC4.97□□□□□ -1.61
PHGDHO43175 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
PHGDHO43175 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC4.97□□□□□ -1.61
PHGDHO43175 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC4.97□□□□□ -1.61
PHGDHO43175 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.97□□□□□ -1.61
PHGDHO43175 MTCYBP38-201ENST00000417160 1123 ntBASIC4.97□□□□□ -1.61
PHGDHO43175 MTND1P20-201ENST00000430341 950 ntBASIC4.97□□□□□ -1.61
PHGDHO43175 RPS20P1-201ENST00000434853 354 ntBASIC4.97□□□□□ -1.61
PHGDHO43175 AC129850.1-201ENST00000436203 508 ntBASIC4.97□□□□□ -1.61
PHGDHO43175 NPM1P33-201ENST00000438918 872 ntBASIC4.97□□□□□ -1.61
PHGDHO43175 CEACAMP9-201ENST00000442990 513 ntBASIC4.97□□□□□ -1.61
PHGDHO43175 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.97□□□□□ -1.61
PHGDHO43175 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms