Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AC078857.1-201ENST00000469870 667 ntBASIC4.03□□□□□ -1.76
PDLIM1O00151 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.03□□□□□ -1.76
PDLIM1O00151 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC4.03□□□□□ -1.76
PDLIM1O00151 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.03□□□□□ -1.76
PDLIM1O00151 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.03□□□□□ -1.76
PDLIM1O00151 RN7SKP92-201ENST00000517266 244 ntBASIC4.03□□□□□ -1.76
PDLIM1O00151 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.03□□□□□ -1.76
PDLIM1O00151 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.03□□□□□ -1.76
PDLIM1O00151 AP001781.1-201ENST00000530977 207 ntBASIC4.03□□□□□ -1.76
PDLIM1O00151 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.03□□□□□ -1.76
PDLIM1O00151 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.03□□□□□ -1.76
PDLIM1O00151 POLR2KP1-201ENST00000553226 168 ntBASIC4.03□□□□□ -1.76
PDLIM1O00151 AC093510.2-201ENST00000562820 896 ntBASIC4.03□□□□□ -1.76
PDLIM1O00151 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.03□□□□□ -1.76
PDLIM1O00151 AC008782.1-201ENST00000603386 430 ntBASIC4.03□□□□□ -1.76
PDLIM1O00151 AC115286.1-201ENST00000604298 434 ntBASIC4.03□□□□□ -1.76
PDLIM1O00151 AC079610.2-201ENST00000604818 690 ntBASIC4.03□□□□□ -1.76
PDLIM1O00151 AL158211.2-201ENST00000607282 395 ntBASIC4.03□□□□□ -1.76
PDLIM1O00151 AC092653.1-201ENST00000608509 531 ntBASIC4.03□□□□□ -1.76
PDLIM1O00151 AC084824.5-201ENST00000612009 413 ntBASIC4.03□□□□□ -1.76
PDLIM1O00151 MIR7973-1-201ENST00000614683 76 ntBASIC4.03□□□□□ -1.76
PDLIM1O00151 MIR6891-201ENST00000618788 93 ntBASIC4.03□□□□□ -1.76
PDLIM1O00151 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC4.03□□□□□ -1.76
PDLIM1O00151 AC097460.3-201ENST00000623099 442 ntBASIC4.03□□□□□ -1.76
PDLIM1O00151 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.03□□□□□ -1.76
PDLIM1O00151 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PDLIM1O00151 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PDLIM1O00151 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PDLIM1O00151 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.02□□□□□ -1.77
PDLIM1O00151 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.02□□□□□ -1.77
PDLIM1O00151 RIOK3P1-201ENST00000418778 1528 ntBASIC4.02□□□□□ -1.77
PDLIM1O00151 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.02□□□□□ -1.77
PDLIM1O00151 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PDLIM1O00151 MIR16-2-201ENST00000362117 81 ntBASIC4.02□□□□□ -1.77
PDLIM1O00151 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PDLIM1O00151 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.02□□□□□ -1.77
PDLIM1O00151 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.02□□□□□ -1.77
PDLIM1O00151 EI24P2-201ENST00000397776 1076 ntBASIC4.02□□□□□ -1.77
PDLIM1O00151 AL590704.1-201ENST00000402856 794 ntBASIC4.02□□□□□ -1.77
PDLIM1O00151 ATF1P1-201ENST00000406040 927 ntBASIC4.02□□□□□ -1.77
PDLIM1O00151 AP000357.1-201ENST00000409926 1165 ntBASIC4.02□□□□□ -1.77
PDLIM1O00151 AL161631.1-201ENST00000417933 486 ntBASIC4.02□□□□□ -1.77
PDLIM1O00151 RPS24P8-201ENST00000431490 402 ntBASIC4.02□□□□□ -1.77
PDLIM1O00151 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.02□□□□□ -1.77
PDLIM1O00151 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.02□□□□□ -1.77
PDLIM1O00151 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC4.02□□□□□ -1.77
PDLIM1O00151 MED6P1-201ENST00000439659 713 ntBASIC4.02□□□□□ -1.77
PDLIM1O00151 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PDLIM1O00151 ZNF736P6Y-201ENST00000447526 1213 ntBASIC4.02□□□□□ -1.77
PDLIM1O00151 MTCO3P16-201ENST00000454456 754 ntBASIC4.02□□□□□ -1.77
PDLIM1O00151 NDUFA12P1-201ENST00000455914 406 ntBASIC4.02□□□□□ -1.77
PDLIM1O00151 RPL7P22-201ENST00000466005 733 ntBASIC4.02□□□□□ -1.77
PDLIM1O00151 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PDLIM1O00151 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.02□□□□□ -1.77
PDLIM1O00151 AK3P4-201ENST00000504283 583 ntBASIC4.02□□□□□ -1.77
PDLIM1O00151 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.02□□□□□ -1.77
PDLIM1O00151 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.02□□□□□ -1.77
PDLIM1O00151 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC4.02□□□□□ -1.77
PDLIM1O00151 RFESD-208ENST00000513950 464 ntTSL 5 BASIC4.02□□□□□ -1.77
PDLIM1O00151 RNU6-467P-201ENST00000517027 110 ntBASIC4.02□□□□□ -1.77
PDLIM1O00151 OR4R2P-201ENST00000530815 597 ntBASIC4.02□□□□□ -1.77
PDLIM1O00151 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.02□□□□□ -1.77
PDLIM1O00151 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.02□□□□□ -1.77
PDLIM1O00151 AC084783.1-201ENST00000565846 910 ntBASIC4.02□□□□□ -1.77
PDLIM1O00151 MTND4LP25-201ENST00000570218 163 ntBASIC4.02□□□□□ -1.77
PDLIM1O00151 MIR5096-201ENST00000583713 70 ntBASIC4.02□□□□□ -1.77
PDLIM1O00151 NF1P5-201ENST00000588287 448 ntBASIC4.02□□□□□ -1.77
PDLIM1O00151 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PDLIM1O00151 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC4.02□□□□□ -1.77
PDLIM1O00151 AF230666.2-201ENST00000602328 725 ntBASIC4.02□□□□□ -1.77
PDLIM1O00151 AC068790.4-201ENST00000602474 263 ntBASIC4.02□□□□□ -1.77
PDLIM1O00151 AC008745.1-201ENST00000604064 271 ntBASIC4.02□□□□□ -1.77
PDLIM1O00151 AL592295.2-201ENST00000612578 206 ntBASIC4.02□□□□□ -1.77
PDLIM1O00151 AL049536.1-201ENST00000625043 744 ntBASIC4.02□□□□□ -1.77
PDLIM1O00151 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.02□□□□□ -1.77
PDLIM1O00151 U6.98-201ENST00000637157 84 ntBASIC4.02□□□□□ -1.77
PDLIM1O00151 LINC01808-202ENST00000641680 1116 ntBASIC4.02□□□□□ -1.77
PDLIM1O00151 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PDLIM1O00151 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PDLIM1O00151 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PDLIM1O00151 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.01□□□□□ -1.77
PDLIM1O00151 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
PDLIM1O00151 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PDLIM1O00151 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PDLIM1O00151 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.01□□□□□ -1.77
PDLIM1O00151 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
PDLIM1O00151 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.01□□□□□ -1.77
PDLIM1O00151 RNU6-1005P-201ENST00000384519 107 ntBASIC4.01□□□□□ -1.77
PDLIM1O00151 MTHFD2P2-201ENST00000407725 247 ntBASIC4.01□□□□□ -1.77
PDLIM1O00151 UBE2V1P11-201ENST00000411559 285 ntBASIC4.01□□□□□ -1.77
PDLIM1O00151 AC069218.2-201ENST00000411665 344 ntBASIC4.01□□□□□ -1.77
PDLIM1O00151 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.01□□□□□ -1.77
PDLIM1O00151 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.01□□□□□ -1.77
PDLIM1O00151 RBMY1KP-201ENST00000423480 476 ntBASIC4.01□□□□□ -1.77
PDLIM1O00151 AP001324.1-201ENST00000428553 399 ntBASIC4.01□□□□□ -1.77
PDLIM1O00151 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.01□□□□□ -1.77
PDLIM1O00151 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.01□□□□□ -1.77
PDLIM1O00151 FTH1P16-201ENST00000435241 552 ntBASIC4.01□□□□□ -1.77
PDLIM1O00151 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.01□□□□□ -1.77
PDLIM1O00151 H2AFZP6-201ENST00000444403 394 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms