Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 AC120053.1-201ENST00000607706 736 ntBASIC4.17□□□□□ -1.74
NEDD8-MDP1E9PL57 AC015813.4-201ENST00000610469 179 ntBASIC4.17□□□□□ -1.74
NEDD8-MDP1E9PL57 AC023509.5-201ENST00000617434 807 ntBASIC4.17□□□□□ -1.74
NEDD8-MDP1E9PL57 MIR7702-201ENST00000621931 59 ntBASIC4.17□□□□□ -1.74
NEDD8-MDP1E9PL57 AC008785.1-201ENST00000624475 456 ntBASIC4.17□□□□□ -1.74
NEDD8-MDP1E9PL57 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
NEDD8-MDP1E9PL57 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
NEDD8-MDP1E9PL57 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.17□□□□□ -1.74
NEDD8-MDP1E9PL57 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
NEDD8-MDP1E9PL57 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
NEDD8-MDP1E9PL57 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
NEDD8-MDP1E9PL57 AC074029.4-201ENST00000624796 1859 ntBASIC4.17□□□□□ -1.74
NEDD8-MDP1E9PL57 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.17□□□□□ -1.74
NEDD8-MDP1E9PL57 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
NEDD8-MDP1E9PL57 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.17□□□□□ -1.74
NEDD8-MDP1E9PL57 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
NEDD8-MDP1E9PL57 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
NEDD8-MDP1E9PL57 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.16□□□□□ -1.74
NEDD8-MDP1E9PL57 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
NEDD8-MDP1E9PL57 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.16□□□□□ -1.74
NEDD8-MDP1E9PL57 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.16□□□□□ -1.74
NEDD8-MDP1E9PL57 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
NEDD8-MDP1E9PL57 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.16□□□□□ -1.74
NEDD8-MDP1E9PL57 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.16□□□□□ -1.74
NEDD8-MDP1E9PL57 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
NEDD8-MDP1E9PL57 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
NEDD8-MDP1E9PL57 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
NEDD8-MDP1E9PL57 LINC01347-201ENST00000417964 355 ntBASIC4.16□□□□□ -1.74
NEDD8-MDP1E9PL57 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.16□□□□□ -1.74
NEDD8-MDP1E9PL57 AL606495.1-201ENST00000422100 813 ntBASIC4.16□□□□□ -1.74
NEDD8-MDP1E9PL57 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.16□□□□□ -1.74
NEDD8-MDP1E9PL57 PNRC2P1-201ENST00000423940 420 ntBASIC4.16□□□□□ -1.74
NEDD8-MDP1E9PL57 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
NEDD8-MDP1E9PL57 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC4.16□□□□□ -1.74
NEDD8-MDP1E9PL57 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.16□□□□□ -1.74
NEDD8-MDP1E9PL57 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC4.16□□□□□ -1.74
NEDD8-MDP1E9PL57 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.16□□□□□ -1.74
NEDD8-MDP1E9PL57 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.16□□□□□ -1.74
NEDD8-MDP1E9PL57 CYCSP20-201ENST00000473154 315 ntBASIC4.16□□□□□ -1.74
NEDD8-MDP1E9PL57 GAPDHP36-201ENST00000480688 918 ntBASIC4.16□□□□□ -1.74
NEDD8-MDP1E9PL57 AC092902.1-201ENST00000486999 259 ntBASIC4.16□□□□□ -1.74
NEDD8-MDP1E9PL57 RPL21P129-201ENST00000491732 478 ntBASIC4.16□□□□□ -1.74
NEDD8-MDP1E9PL57 AC104629.1-201ENST00000494226 508 ntBASIC4.16□□□□□ -1.74
NEDD8-MDP1E9PL57 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.16□□□□□ -1.74
NEDD8-MDP1E9PL57 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
NEDD8-MDP1E9PL57 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC4.16□□□□□ -1.74
NEDD8-MDP1E9PL57 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC4.16□□□□□ -1.74
NEDD8-MDP1E9PL57 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC4.16□□□□□ -1.74
NEDD8-MDP1E9PL57 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.16□□□□□ -1.74
NEDD8-MDP1E9PL57 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.16□□□□□ -1.74
NEDD8-MDP1E9PL57 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC4.16□□□□□ -1.74
NEDD8-MDP1E9PL57 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.16□□□□□ -1.74
NEDD8-MDP1E9PL57 NPM1P47-201ENST00000560843 856 ntBASIC4.16□□□□□ -1.74
NEDD8-MDP1E9PL57 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.16□□□□□ -1.74
NEDD8-MDP1E9PL57 AC012417.1-201ENST00000582307 1039 ntBASIC4.16□□□□□ -1.74
NEDD8-MDP1E9PL57 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.16□□□□□ -1.74
NEDD8-MDP1E9PL57 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.16□□□□□ -1.74
NEDD8-MDP1E9PL57 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.16□□□□□ -1.74
NEDD8-MDP1E9PL57 AC005255.1-201ENST00000593748 216 ntBASIC4.16□□□□□ -1.74
NEDD8-MDP1E9PL57 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.16□□□□□ -1.74
NEDD8-MDP1E9PL57 AC090912.3-201ENST00000609775 533 ntBASIC4.16□□□□□ -1.74
NEDD8-MDP1E9PL57 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
NEDD8-MDP1E9PL57 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC4.16□□□□□ -1.74
NEDD8-MDP1E9PL57 AC015908.5-201ENST00000623289 343 ntBASIC4.16□□□□□ -1.74
NEDD8-MDP1E9PL57 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
NEDD8-MDP1E9PL57 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.16□□□□□ -1.74
NEDD8-MDP1E9PL57 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.16□□□□□ -1.74
NEDD8-MDP1E9PL57 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
NEDD8-MDP1E9PL57 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.16□□□□□ -1.74
NEDD8-MDP1E9PL57 AC090971.4-201ENST00000560291 1800 ntBASIC4.16□□□□□ -1.74
NEDD8-MDP1E9PL57 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.16□□□□□ -1.74
NEDD8-MDP1E9PL57 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
NEDD8-MDP1E9PL57 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
NEDD8-MDP1E9PL57 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
NEDD8-MDP1E9PL57 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
NEDD8-MDP1E9PL57 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
NEDD8-MDP1E9PL57 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
NEDD8-MDP1E9PL57 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
NEDD8-MDP1E9PL57 MAPK10-304ENST00000641341 3984 ntBASIC4.15□□□□□ -1.74
NEDD8-MDP1E9PL57 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
NEDD8-MDP1E9PL57 RNU6-452P-201ENST00000384406 107 ntBASIC4.15□□□□□ -1.75
NEDD8-MDP1E9PL57 MIR23B-201ENST00000384832 97 ntBASIC4.15□□□□□ -1.75
NEDD8-MDP1E9PL57 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
NEDD8-MDP1E9PL57 RN7SKP159-201ENST00000410657 292 ntBASIC4.15□□□□□ -1.75
NEDD8-MDP1E9PL57 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC4.15□□□□□ -1.75
NEDD8-MDP1E9PL57 SKP1P3-201ENST00000429280 487 ntBASIC4.15□□□□□ -1.75
NEDD8-MDP1E9PL57 ZNF736P1Y-201ENST00000440402 1276 ntBASIC4.15□□□□□ -1.75
NEDD8-MDP1E9PL57 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.15□□□□□ -1.75
NEDD8-MDP1E9PL57 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC4.15□□□□□ -1.75
NEDD8-MDP1E9PL57 MOB1AP2-201ENST00000446060 614 ntBASIC4.15□□□□□ -1.75
NEDD8-MDP1E9PL57 RPS11P1-201ENST00000451072 473 ntBASIC4.15□□□□□ -1.75
NEDD8-MDP1E9PL57 CLIC4P1-201ENST00000453177 535 ntBASIC4.15□□□□□ -1.75
NEDD8-MDP1E9PL57 AL121877.1-201ENST00000453704 622 ntBASIC4.15□□□□□ -1.75
NEDD8-MDP1E9PL57 RAD23BP3-201ENST00000454157 1152 ntBASIC4.15□□□□□ -1.75
NEDD8-MDP1E9PL57 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.15□□□□□ -1.75
NEDD8-MDP1E9PL57 AC121161.1-201ENST00000510606 652 ntBASIC4.15□□□□□ -1.75
NEDD8-MDP1E9PL57 RNU7-143P-201ENST00000516781 65 ntBASIC4.15□□□□□ -1.75
NEDD8-MDP1E9PL57 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC4.15□□□□□ -1.75
NEDD8-MDP1E9PL57 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.15□□□□□ -1.75
NEDD8-MDP1E9PL57 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms