Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
PCDHGC4Q9Y5F7 AL731534.1-201ENST00000434711 269 ntBASIC6.34□□□□□ -1.39
PCDHGC4Q9Y5F7 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC6.34□□□□□ -1.39
PCDHGC4Q9Y5F7 TIMM8BP2-201ENST00000445940 251 ntBASIC6.34□□□□□ -1.39
PCDHGC4Q9Y5F7 DDX3P2-201ENST00000446138 111 ntBASIC6.34□□□□□ -1.39
PCDHGC4Q9Y5F7 MORF4-201ENST00000447135 971 ntBASIC6.34□□□□□ -1.39
PCDHGC4Q9Y5F7 YWHAEP1-201ENST00000453697 763 ntBASIC6.34□□□□□ -1.39
PCDHGC4Q9Y5F7 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC6.34□□□□□ -1.39
PCDHGC4Q9Y5F7 APOOP2-201ENST00000461561 539 ntBASIC6.34□□□□□ -1.39
PCDHGC4Q9Y5F7 RPS15AP17-201ENST00000470598 390 ntBASIC6.34□□□□□ -1.39
PCDHGC4Q9Y5F7 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC6.34□□□□□ -1.39
PCDHGC4Q9Y5F7 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC6.34□□□□□ -1.39
PCDHGC4Q9Y5F7 TMEM251P1-201ENST00000503717 318 ntBASIC6.34□□□□□ -1.39
PCDHGC4Q9Y5F7 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.34□□□□□ -1.39
PCDHGC4Q9Y5F7 RNU4-29P-201ENST00000515943 174 ntBASIC6.34□□□□□ -1.39
PCDHGC4Q9Y5F7 Y_RNA.665-201ENST00000516177 98 ntBASIC6.34□□□□□ -1.39
PCDHGC4Q9Y5F7 RN7SKP295-201ENST00000517264 153 ntBASIC6.34□□□□□ -1.39
PCDHGC4Q9Y5F7 AC104986.1-201ENST00000517978 436 ntBASIC6.34□□□□□ -1.39
PCDHGC4Q9Y5F7 RPL7P20-201ENST00000520308 745 ntBASIC6.34□□□□□ -1.39
PCDHGC4Q9Y5F7 AP005902.1-201ENST00000521358 186 ntBASIC6.34□□□□□ -1.39
PCDHGC4Q9Y5F7 AF279873.1-201ENST00000523393 313 ntBASIC6.34□□□□□ -1.39
PCDHGC4Q9Y5F7 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC6.34□□□□□ -1.39
PCDHGC4Q9Y5F7 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.34□□□□□ -1.39
PCDHGC4Q9Y5F7 OR4T1P-201ENST00000554933 911 ntBASIC6.34□□□□□ -1.39
PCDHGC4Q9Y5F7 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC6.34□□□□□ -1.39
PCDHGC4Q9Y5F7 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC6.34□□□□□ -1.39
PCDHGC4Q9Y5F7 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC6.34□□□□□ -1.39
PCDHGC4Q9Y5F7 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.34□□□□□ -1.39
PCDHGC4Q9Y5F7 AC111152.1-202ENST00000635848 339 ntBASIC6.34□□□□□ -1.39
PCDHGC4Q9Y5F7 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.34□□□□□ -1.39
PCDHGC4Q9Y5F7 AF287957.1-201ENST00000607368 1595 ntBASIC6.34□□□□□ -1.39
PCDHGC4Q9Y5F7 AC011369.2-201ENST00000624423 1567 ntBASIC6.34□□□□□ -1.39
PCDHGC4Q9Y5F7 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
PCDHGC4Q9Y5F7 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PCDHGC4Q9Y5F7 AP000547.3-204ENST00000588548 2523 ntBASIC6.34□□□□□ -1.39
PCDHGC4Q9Y5F7 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
PCDHGC4Q9Y5F7 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
PCDHGC4Q9Y5F7 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
PCDHGC4Q9Y5F7 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
PCDHGC4Q9Y5F7 THUMPD3P1-201ENST00000506556 1480 ntBASIC6.34□□□□□ -1.4
PCDHGC4Q9Y5F7 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.34□□□□□ -1.4
PCDHGC4Q9Y5F7 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
PCDHGC4Q9Y5F7 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
PCDHGC4Q9Y5F7 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
PCDHGC4Q9Y5F7 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.34□□□□□ -1.4
PCDHGC4Q9Y5F7 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
PCDHGC4Q9Y5F7 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
PCDHGC4Q9Y5F7 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.33□□□□□ -1.4
PCDHGC4Q9Y5F7 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.33□□□□□ -1.4
PCDHGC4Q9Y5F7 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PCDHGC4Q9Y5F7 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
PCDHGC4Q9Y5F7 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
PCDHGC4Q9Y5F7 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
PCDHGC4Q9Y5F7 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PCDHGC4Q9Y5F7 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
PCDHGC4Q9Y5F7 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
PCDHGC4Q9Y5F7 MDM4-202ENST00000367180 547 ntTSL 3 BASIC6.33□□□□□ -1.4
PCDHGC4Q9Y5F7 MIR514A2-201ENST00000385131 88 ntBASIC6.33□□□□□ -1.4
PCDHGC4Q9Y5F7 MIR514A3-201ENST00000385132 88 ntBASIC6.33□□□□□ -1.4
PCDHGC4Q9Y5F7 RN7SKP247-201ENST00000411094 308 ntBASIC6.33□□□□□ -1.4
PCDHGC4Q9Y5F7 CBX1P3-201ENST00000413296 527 ntBASIC6.33□□□□□ -1.4
PCDHGC4Q9Y5F7 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
PCDHGC4Q9Y5F7 TPMTP2-201ENST00000414372 726 ntBASIC6.33□□□□□ -1.4
PCDHGC4Q9Y5F7 AC108479.1-201ENST00000431142 427 ntBASIC6.33□□□□□ -1.4
PCDHGC4Q9Y5F7 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC6.33□□□□□ -1.4
PCDHGC4Q9Y5F7 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.33□□□□□ -1.4
PCDHGC4Q9Y5F7 AC079781.2-201ENST00000446424 169 ntBASIC6.33□□□□□ -1.4
PCDHGC4Q9Y5F7 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC6.33□□□□□ -1.4
PCDHGC4Q9Y5F7 MRPS31P2-201ENST00000451581 518 ntBASIC6.33□□□□□ -1.4
PCDHGC4Q9Y5F7 RANP2-201ENST00000456833 229 ntBASIC6.33□□□□□ -1.4
PCDHGC4Q9Y5F7 AC104339.1-201ENST00000465478 348 ntBASIC6.33□□□□□ -1.4
PCDHGC4Q9Y5F7 RPL23AP12-201ENST00000467573 473 ntBASIC6.33□□□□□ -1.4
PCDHGC4Q9Y5F7 RN7SL362P-201ENST00000494228 267 ntBASIC6.33□□□□□ -1.4
PCDHGC4Q9Y5F7 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC6.33□□□□□ -1.4
PCDHGC4Q9Y5F7 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC6.33□□□□□ -1.4
PCDHGC4Q9Y5F7 Y_RNA.682-201ENST00000516457 100 ntBASIC6.33□□□□□ -1.4
PCDHGC4Q9Y5F7 AC009902.1-201ENST00000519351 183 ntBASIC6.33□□□□□ -1.4
PCDHGC4Q9Y5F7 AC107934.1-201ENST00000522215 217 ntBASIC6.33□□□□□ -1.4
PCDHGC4Q9Y5F7 COX6CP8-201ENST00000522620 226 ntBASIC6.33□□□□□ -1.4
PCDHGC4Q9Y5F7 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC6.33□□□□□ -1.4
PCDHGC4Q9Y5F7 ARL6IP1P3-201ENST00000524544 560 ntBASIC6.33□□□□□ -1.4
PCDHGC4Q9Y5F7 AP005639.1-201ENST00000526939 192 ntBASIC6.33□□□□□ -1.4
PCDHGC4Q9Y5F7 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC6.33□□□□□ -1.4
PCDHGC4Q9Y5F7 PMS2P3-207ENST00000529061 717 ntBASIC6.33□□□□□ -1.4
PCDHGC4Q9Y5F7 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC6.33□□□□□ -1.4
PCDHGC4Q9Y5F7 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC6.33□□□□□ -1.4
PCDHGC4Q9Y5F7 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC6.33□□□□□ -1.4
PCDHGC4Q9Y5F7 AC092332.1-201ENST00000563684 829 ntBASIC6.33□□□□□ -1.4
PCDHGC4Q9Y5F7 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC6.33□□□□□ -1.4
PCDHGC4Q9Y5F7 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC6.33□□□□□ -1.4
PCDHGC4Q9Y5F7 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC6.33□□□□□ -1.4
PCDHGC4Q9Y5F7 AL391813.2-201ENST00000609113 322 ntBASIC6.33□□□□□ -1.4
PCDHGC4Q9Y5F7 AL359091.2-201ENST00000609303 556 ntBASIC6.33□□□□□ -1.4
PCDHGC4Q9Y5F7 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC6.33□□□□□ -1.4
PCDHGC4Q9Y5F7 uc_338.31-201ENST00000615595 186 ntBASIC6.33□□□□□ -1.4
PCDHGC4Q9Y5F7 AC145207.9-201ENST00000623802 325 ntBASIC6.33□□□□□ -1.4
PCDHGC4Q9Y5F7 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.33□□□□□ -1.4
PCDHGC4Q9Y5F7 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC6.33□□□□□ -1.4
PCDHGC4Q9Y5F7 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PCDHGC4Q9Y5F7 USP44-208ENST00000552440 1818 ntTSL 5 BASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms