Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 AC010881.1-201ENST00000433830 235 ntBASIC7.14□□□□□ -1.27
VPS9D1Q9Y2B5 RPL36AP6-201ENST00000435770 321 ntBASIC7.14□□□□□ -1.27
VPS9D1Q9Y2B5 AC004866.2-201ENST00000438285 481 ntBASIC7.14□□□□□ -1.27
VPS9D1Q9Y2B5 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
VPS9D1Q9Y2B5 AC108734.1-201ENST00000439549 399 ntBASIC7.14□□□□□ -1.27
VPS9D1Q9Y2B5 AC079781.1-201ENST00000441505 394 ntBASIC7.14□□□□□ -1.27
VPS9D1Q9Y2B5 IGKV1OR10-1-201ENST00000442306 329 ntBASIC7.14□□□□□ -1.27
VPS9D1Q9Y2B5 NUTF2P3-201ENST00000448540 384 ntBASIC7.14□□□□□ -1.27
VPS9D1Q9Y2B5 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
VPS9D1Q9Y2B5 RPSAP7-201ENST00000456871 885 ntBASIC7.14□□□□□ -1.27
VPS9D1Q9Y2B5 MTCO3P2-201ENST00000457365 171 ntBASIC7.14□□□□□ -1.27
VPS9D1Q9Y2B5 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
VPS9D1Q9Y2B5 IGKV1OR22-5-201ENST00000458718 354 ntBASIC7.14□□□□□ -1.27
VPS9D1Q9Y2B5 UOX-201ENST00000471089 899 ntBASIC7.14□□□□□ -1.27
VPS9D1Q9Y2B5 RN7SL88P-201ENST00000480166 299 ntBASIC7.14□□□□□ -1.27
VPS9D1Q9Y2B5 AC026826.1-201ENST00000493002 361 ntBASIC7.14□□□□□ -1.27
VPS9D1Q9Y2B5 AKIRIN2P1-201ENST00000505898 352 ntBASIC7.14□□□□□ -1.27
VPS9D1Q9Y2B5 AC117422.1-201ENST00000508263 379 ntTSL 3 BASIC7.14□□□□□ -1.27
VPS9D1Q9Y2B5 AC109481.1-201ENST00000509173 282 ntBASIC7.14□□□□□ -1.27
VPS9D1Q9Y2B5 AC016559.1-201ENST00000511420 199 ntBASIC7.14□□□□□ -1.27
VPS9D1Q9Y2B5 AC117383.2-201ENST00000514722 322 ntBASIC7.14□□□□□ -1.27
VPS9D1Q9Y2B5 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC7.14□□□□□ -1.27
VPS9D1Q9Y2B5 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC7.14□□□□□ -1.27
VPS9D1Q9Y2B5 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC7.14□□□□□ -1.27
VPS9D1Q9Y2B5 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC7.14□□□□□ -1.27
VPS9D1Q9Y2B5 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC7.14□□□□□ -1.27
VPS9D1Q9Y2B5 APAF1-207ENST00000547743 651 ntTSL 3 BASIC7.14□□□□□ -1.27
VPS9D1Q9Y2B5 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC7.14□□□□□ -1.27
VPS9D1Q9Y2B5 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC7.14□□□□□ -1.27
VPS9D1Q9Y2B5 TGFB3-AS1-201ENST00000553732 580 ntTSL 4 BASIC7.14□□□□□ -1.27
VPS9D1Q9Y2B5 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
VPS9D1Q9Y2B5 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC7.14□□□□□ -1.27
VPS9D1Q9Y2B5 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC7.14□□□□□ -1.27
VPS9D1Q9Y2B5 AP001554.1-201ENST00000604533 376 ntBASIC7.14□□□□□ -1.27
VPS9D1Q9Y2B5 RN7SL778P-201ENST00000607160 297 ntBASIC7.14□□□□□ -1.27
VPS9D1Q9Y2B5 AC244196.5-201ENST00000617347 406 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
VPS9D1Q9Y2B5 uc_338.37-201ENST00000620113 186 ntBASIC7.14□□□□□ -1.27
VPS9D1Q9Y2B5 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
VPS9D1Q9Y2B5 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
VPS9D1Q9Y2B5 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
VPS9D1Q9Y2B5 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC7.14□□□□□ -1.27
VPS9D1Q9Y2B5 ZFX-201ENST00000304543 2996 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
VPS9D1Q9Y2B5 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC7.14□□□□□ -1.27
VPS9D1Q9Y2B5 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
VPS9D1Q9Y2B5 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
VPS9D1Q9Y2B5 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC7.14□□□□□ -1.27
VPS9D1Q9Y2B5 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
VPS9D1Q9Y2B5 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
VPS9D1Q9Y2B5 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC7.13□□□□□ -1.27
VPS9D1Q9Y2B5 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
VPS9D1Q9Y2B5 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
VPS9D1Q9Y2B5 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
VPS9D1Q9Y2B5 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
VPS9D1Q9Y2B5 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
VPS9D1Q9Y2B5 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
VPS9D1Q9Y2B5 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC7.13□□□□□ -1.27
VPS9D1Q9Y2B5 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
VPS9D1Q9Y2B5 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
VPS9D1Q9Y2B5 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
VPS9D1Q9Y2B5 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
VPS9D1Q9Y2B5 GPR1-203ENST00000437420 1557 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
VPS9D1Q9Y2B5 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
VPS9D1Q9Y2B5 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
VPS9D1Q9Y2B5 RNU6-511P-201ENST00000363496 107 ntBASIC7.13□□□□□ -1.27
VPS9D1Q9Y2B5 SNORA30B-201ENST00000365319 129 ntBASIC7.13□□□□□ -1.27
VPS9D1Q9Y2B5 SNORA70G-201ENST00000383923 142 ntBASIC7.13□□□□□ -1.27
VPS9D1Q9Y2B5 RNU6-1168P-201ENST00000390831 104 ntBASIC7.13□□□□□ -1.27
VPS9D1Q9Y2B5 AC004386.1-201ENST00000393214 761 ntBASIC7.13□□□□□ -1.27
VPS9D1Q9Y2B5 RPLP0P7-201ENST00000416050 667 ntBASIC7.13□□□□□ -1.27
VPS9D1Q9Y2B5 OSTCP4-201ENST00000424397 449 ntBASIC7.13□□□□□ -1.27
VPS9D1Q9Y2B5 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC7.13□□□□□ -1.27
VPS9D1Q9Y2B5 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC7.13□□□□□ -1.27
VPS9D1Q9Y2B5 RHOT1P3-201ENST00000436571 331 ntBASIC7.13□□□□□ -1.27
VPS9D1Q9Y2B5 RPS18P1-201ENST00000447840 458 ntBASIC7.13□□□□□ -1.27
VPS9D1Q9Y2B5 AL031274.1-201ENST00000450334 232 ntBASIC7.13□□□□□ -1.27
VPS9D1Q9Y2B5 RPL21P104-201ENST00000464143 478 ntBASIC7.13□□□□□ -1.27
VPS9D1Q9Y2B5 UBA52P3-201ENST00000491303 382 ntBASIC7.13□□□□□ -1.27
VPS9D1Q9Y2B5 RN7SL101P-201ENST00000496350 279 ntBASIC7.13□□□□□ -1.27
VPS9D1Q9Y2B5 SNORA72.7-201ENST00000516349 94 ntBASIC7.13□□□□□ -1.27
VPS9D1Q9Y2B5 IGKV2-23-201ENST00000518729 323 ntBASIC7.13□□□□□ -1.27
VPS9D1Q9Y2B5 AC004024.1-201ENST00000549244 247 ntBASIC7.13□□□□□ -1.27
VPS9D1Q9Y2B5 NQO1-205ENST00000561500 891 ntTSL 3 BASIC7.13□□□□□ -1.27
VPS9D1Q9Y2B5 ULK4P1-202ENST00000565174 503 ntBASIC7.13□□□□□ -1.27
VPS9D1Q9Y2B5 AC023827.2-201ENST00000566880 1061 ntBASIC7.13□□□□□ -1.27
VPS9D1Q9Y2B5 AC024619.4-201ENST00000580924 316 ntBASIC7.13□□□□□ -1.27
VPS9D1Q9Y2B5 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC7.13□□□□□ -1.27
VPS9D1Q9Y2B5 AC008385.1-201ENST00000604421 355 ntBASIC7.13□□□□□ -1.27
VPS9D1Q9Y2B5 AC011921.3-201ENST00000605540 361 ntBASIC7.13□□□□□ -1.27
VPS9D1Q9Y2B5 AC211433.3-201ENST00000623770 375 ntBASIC7.13□□□□□ -1.27
VPS9D1Q9Y2B5 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC7.13□□□□□ -1.27
VPS9D1Q9Y2B5 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC7.13□□□□□ -1.27
VPS9D1Q9Y2B5 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
VPS9D1Q9Y2B5 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
VPS9D1Q9Y2B5 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
VPS9D1Q9Y2B5 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
VPS9D1Q9Y2B5 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC7.13□□□□□ -1.27
VPS9D1Q9Y2B5 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC7.13□□□□□ -1.27
VPS9D1Q9Y2B5 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC7.13□□□□□ -1.27
VPS9D1Q9Y2B5 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
VPS9D1Q9Y2B5 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC7.13□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms