Protein–RNA interactions for Protein: Q9UJQ4

SALL4, Sal-like protein 4, humanhuman

Predictions only

Length 1,053 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL4Q9UJQ4 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SALL4Q9UJQ4 SNORA21-201ENST00000362423 132 ntBASIC6.29□□□□□ -1.4
SALL4Q9UJQ4 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SALL4Q9UJQ4 Y_RNA.419-201ENST00000384041 102 ntBASIC6.29□□□□□ -1.4
SALL4Q9UJQ4 RNU6-225P-201ENST00000384613 103 ntBASIC6.29□□□□□ -1.4
SALL4Q9UJQ4 AC092642.1-201ENST00000392417 425 ntBASIC6.29□□□□□ -1.4
SALL4Q9UJQ4 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.29□□□□□ -1.4
SALL4Q9UJQ4 RPL35AP31-201ENST00000418340 337 ntBASIC6.29□□□□□ -1.4
SALL4Q9UJQ4 AL590399.4-201ENST00000436561 601 ntBASIC6.29□□□□□ -1.4
SALL4Q9UJQ4 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SALL4Q9UJQ4 ACTR3P2-201ENST00000439585 1257 ntBASIC6.29□□□□□ -1.4
SALL4Q9UJQ4 EIF5AP4-201ENST00000441206 465 ntBASIC6.29□□□□□ -1.4
SALL4Q9UJQ4 CBWD4P-201ENST00000445695 655 ntBASIC6.29□□□□□ -1.4
SALL4Q9UJQ4 AL136380.1-201ENST00000447970 162 ntBASIC6.29□□□□□ -1.4
SALL4Q9UJQ4 SBDSP1-204ENST00000453858 737 ntBASIC6.29□□□□□ -1.4
SALL4Q9UJQ4 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SALL4Q9UJQ4 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
SALL4Q9UJQ4 AC094085.1-201ENST00000468914 584 ntBASIC6.29□□□□□ -1.4
SALL4Q9UJQ4 AC007537.2-201ENST00000472093 511 ntBASIC6.29□□□□□ -1.4
SALL4Q9UJQ4 AC083798.1-201ENST00000472671 131 ntBASIC6.29□□□□□ -1.4
SALL4Q9UJQ4 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
SALL4Q9UJQ4 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.29□□□□□ -1.4
SALL4Q9UJQ4 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.29□□□□□ -1.4
SALL4Q9UJQ4 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC6.29□□□□□ -1.4
SALL4Q9UJQ4 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC6.29□□□□□ -1.4
SALL4Q9UJQ4 MIR2117-201ENST00000516780 80 ntBASIC6.29□□□□□ -1.4
SALL4Q9UJQ4 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC6.29□□□□□ -1.4
SALL4Q9UJQ4 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC6.29□□□□□ -1.4
SALL4Q9UJQ4 AP004609.2-201ENST00000532177 190 ntBASIC6.29□□□□□ -1.4
SALL4Q9UJQ4 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
SALL4Q9UJQ4 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.29□□□□□ -1.4
SALL4Q9UJQ4 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.29□□□□□ -1.4
SALL4Q9UJQ4 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC6.29□□□□□ -1.4
SALL4Q9UJQ4 AC099489.2-201ENST00000574976 260 ntBASIC6.29□□□□□ -1.4
SALL4Q9UJQ4 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC6.29□□□□□ -1.4
SALL4Q9UJQ4 MIR4701-201ENST00000583094 63 ntBASIC6.29□□□□□ -1.4
SALL4Q9UJQ4 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.29□□□□□ -1.4
SALL4Q9UJQ4 AC011468.4-201ENST00000603942 409 ntBASIC6.29□□□□□ -1.4
SALL4Q9UJQ4 AL360085.1-201ENST00000604713 532 ntBASIC6.29□□□□□ -1.4
SALL4Q9UJQ4 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC6.29□□□□□ -1.4
SALL4Q9UJQ4 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6.29□□□□□ -1.4
SALL4Q9UJQ4 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
SALL4Q9UJQ4 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SALL4Q9UJQ4 AC097504.1-201ENST00000515103 2415 ntBASIC6.29□□□□□ -1.4
SALL4Q9UJQ4 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.29□□□□□ -1.4
SALL4Q9UJQ4 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SALL4Q9UJQ4 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SALL4Q9UJQ4 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SALL4Q9UJQ4 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
SALL4Q9UJQ4 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SALL4Q9UJQ4 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SALL4Q9UJQ4 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
SALL4Q9UJQ4 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
SALL4Q9UJQ4 RNU1-39P-201ENST00000383897 165 ntBASIC6.28□□□□□ -1.4
SALL4Q9UJQ4 RNA5SP122-201ENST00000384457 108 ntBASIC6.28□□□□□ -1.4
SALL4Q9UJQ4 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
SALL4Q9UJQ4 RNA5SP156-201ENST00000410250 110 ntBASIC6.28□□□□□ -1.4
SALL4Q9UJQ4 RN7SKP144-201ENST00000411108 279 ntBASIC6.28□□□□□ -1.4
SALL4Q9UJQ4 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC6.28□□□□□ -1.4
SALL4Q9UJQ4 AL354868.1-201ENST00000417077 482 ntBASIC6.28□□□□□ -1.4
SALL4Q9UJQ4 MTATP6P18-201ENST00000417994 673 ntBASIC6.28□□□□□ -1.4
SALL4Q9UJQ4 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC6.28□□□□□ -1.4
SALL4Q9UJQ4 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.28□□□□□ -1.4
SALL4Q9UJQ4 MTCYBP6-201ENST00000441810 138 ntBASIC6.28□□□□□ -1.4
SALL4Q9UJQ4 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC6.28□□□□□ -1.4
SALL4Q9UJQ4 AC004129.2-201ENST00000457229 287 ntBASIC6.28□□□□□ -1.4
SALL4Q9UJQ4 AC104164.1-201ENST00000460282 590 ntBASIC6.28□□□□□ -1.4
SALL4Q9UJQ4 AC090142.1-201ENST00000465776 462 ntBASIC6.28□□□□□ -1.4
SALL4Q9UJQ4 AC010301.1-201ENST00000473936 355 ntBASIC6.28□□□□□ -1.4
SALL4Q9UJQ4 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SALL4Q9UJQ4 RNU6-488P-201ENST00000515918 99 ntBASIC6.28□□□□□ -1.4
SALL4Q9UJQ4 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC6.28□□□□□ -1.4
SALL4Q9UJQ4 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC6.28□□□□□ -1.4
SALL4Q9UJQ4 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC6.28□□□□□ -1.4
SALL4Q9UJQ4 AC125612.1-201ENST00000547580 377 ntBASIC6.28□□□□□ -1.4
SALL4Q9UJQ4 NACA-211ENST00000548563 827 ntTSL 5 BASIC6.28□□□□□ -1.4
SALL4Q9UJQ4 HSPE1P2-201ENST00000554777 306 ntBASIC6.28□□□□□ -1.4
SALL4Q9UJQ4 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.28□□□□□ -1.4
SALL4Q9UJQ4 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC6.28□□□□□ -1.4
SALL4Q9UJQ4 AL355375.2-201ENST00000574825 175 ntBASIC6.28□□□□□ -1.4
SALL4Q9UJQ4 DISC2.1-201ENST00000612827 205 ntBASIC6.28□□□□□ -1.4
SALL4Q9UJQ4 AC015712.7-201ENST00000615211 635 ntBASIC6.28□□□□□ -1.4
SALL4Q9UJQ4 RFPL4AP6-201ENST00000616792 846 ntBASIC6.28□□□□□ -1.4
SALL4Q9UJQ4 AL031658.2-201ENST00000616850 651 ntBASIC6.28□□□□□ -1.4
SALL4Q9UJQ4 AC024940.5-201ENST00000622889 474 ntBASIC6.28□□□□□ -1.4
SALL4Q9UJQ4 AC073488.6-201ENST00000632293 754 ntBASIC6.28□□□□□ -1.4
SALL4Q9UJQ4 AC099654.6-201ENST00000636487 512 ntBASIC6.28□□□□□ -1.4
SALL4Q9UJQ4 AC232271.1-201ENST00000602455 2715 ntBASIC6.28□□□□□ -1.4
SALL4Q9UJQ4 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.28□□□□□ -1.4
SALL4Q9UJQ4 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC6.28□□□□□ -1.4
SALL4Q9UJQ4 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SALL4Q9UJQ4 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.28□□□□□ -1.4
SALL4Q9UJQ4 AC109446.4-201ENST00000623235 2755 ntBASIC6.28□□□□□ -1.4
SALL4Q9UJQ4 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SALL4Q9UJQ4 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.4
SALL4Q9UJQ4 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.27□□□□□ -1.41
SALL4Q9UJQ4 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
SALL4Q9UJQ4 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC6.27□□□□□ -1.41
SALL4Q9UJQ4 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
SALL4Q9UJQ4 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 138.5 ms