Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
PDLIM7Q9NR12 RNA5SP453-201ENST00000362503 119 ntBASIC5.88□□□□□ -1.47
PDLIM7Q9NR12 U3.3-201ENST00000362986 216 ntBASIC5.88□□□□□ -1.47
PDLIM7Q9NR12 RN7SKP226-201ENST00000364912 300 ntBASIC5.88□□□□□ -1.47
PDLIM7Q9NR12 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
PDLIM7Q9NR12 MIR105-1-201ENST00000385222 81 ntBASIC5.88□□□□□ -1.47
PDLIM7Q9NR12 AC007066.1-201ENST00000392902 381 ntBASIC5.88□□□□□ -1.47
PDLIM7Q9NR12 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC5.88□□□□□ -1.47
PDLIM7Q9NR12 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC5.88□□□□□ -1.47
PDLIM7Q9NR12 GAPDHP49-201ENST00000421421 961 ntBASIC5.88□□□□□ -1.47
PDLIM7Q9NR12 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC5.88□□□□□ -1.47
PDLIM7Q9NR12 MTND3P21-201ENST00000433774 331 ntBASIC5.88□□□□□ -1.47
PDLIM7Q9NR12 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC5.88□□□□□ -1.47
PDLIM7Q9NR12 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.88□□□□□ -1.47
PDLIM7Q9NR12 PRPF38AP2-201ENST00000438179 851 ntBASIC5.88□□□□□ -1.47
PDLIM7Q9NR12 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC5.88□□□□□ -1.47
PDLIM7Q9NR12 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.88□□□□□ -1.47
PDLIM7Q9NR12 MTND6P6-201ENST00000478031 263 ntBASIC5.88□□□□□ -1.47
PDLIM7Q9NR12 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC5.88□□□□□ -1.47
PDLIM7Q9NR12 IGBP1P4-201ENST00000503202 879 ntBASIC5.88□□□□□ -1.47
PDLIM7Q9NR12 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC5.88□□□□□ -1.47
PDLIM7Q9NR12 AC098799.2-201ENST00000509466 868 ntBASIC5.88□□□□□ -1.47
PDLIM7Q9NR12 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.88□□□□□ -1.47
PDLIM7Q9NR12 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.88□□□□□ -1.47
PDLIM7Q9NR12 IGHV3-32-201ENST00000519182 355 ntBASIC5.88□□□□□ -1.47
PDLIM7Q9NR12 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC5.88□□□□□ -1.47
PDLIM7Q9NR12 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.88□□□□□ -1.47
PDLIM7Q9NR12 AP001646.1-201ENST00000527936 915 ntBASIC5.88□□□□□ -1.47
PDLIM7Q9NR12 AP002453.2-201ENST00000533503 320 ntBASIC5.88□□□□□ -1.47
PDLIM7Q9NR12 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC5.88□□□□□ -1.47
PDLIM7Q9NR12 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC5.88□□□□□ -1.47
PDLIM7Q9NR12 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC5.88□□□□□ -1.47
PDLIM7Q9NR12 MIR4737-201ENST00000583979 81 ntBASIC5.88□□□□□ -1.47
PDLIM7Q9NR12 MIR7853-201ENST00000584820 132 ntBASIC5.88□□□□□ -1.47
PDLIM7Q9NR12 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC5.88□□□□□ -1.47
PDLIM7Q9NR12 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.88□□□□□ -1.47
PDLIM7Q9NR12 SEPT7P9-203ENST00000604116 343 ntBASIC5.88□□□□□ -1.47
PDLIM7Q9NR12 AC104687.2-201ENST00000604442 342 ntBASIC5.88□□□□□ -1.47
PDLIM7Q9NR12 AL022154.1-201ENST00000604698 785 ntBASIC5.88□□□□□ -1.47
PDLIM7Q9NR12 AC010632.3-201ENST00000611377 369 ntBASIC5.88□□□□□ -1.47
PDLIM7Q9NR12 AC063943.3-201ENST00000615562 356 ntBASIC5.88□□□□□ -1.47
PDLIM7Q9NR12 MESTIT1_2.1-201ENST00000616328 235 ntBASIC5.88□□□□□ -1.47
PDLIM7Q9NR12 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC5.88□□□□□ -1.47
PDLIM7Q9NR12 AC073348.1-201ENST00000623002 331 ntBASIC5.88□□□□□ -1.47
PDLIM7Q9NR12 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.88□□□□□ -1.47
PDLIM7Q9NR12 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PDLIM7Q9NR12 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.88□□□□□ -1.47
PDLIM7Q9NR12 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
PDLIM7Q9NR12 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
PDLIM7Q9NR12 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PDLIM7Q9NR12 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
PDLIM7Q9NR12 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.87□□□□□ -1.47
PDLIM7Q9NR12 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.87□□□□□ -1.47
PDLIM7Q9NR12 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.87□□□□□ -1.47
PDLIM7Q9NR12 TTC41P-205ENST00000551270 3963 ntBASIC5.87□□□□□ -1.47
PDLIM7Q9NR12 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PDLIM7Q9NR12 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PDLIM7Q9NR12 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
PDLIM7Q9NR12 RNA5SP455-201ENST00000365190 119 ntBASIC5.87□□□□□ -1.47
PDLIM7Q9NR12 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PDLIM7Q9NR12 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PDLIM7Q9NR12 RNU6-98P-201ENST00000384173 107 ntBASIC5.87□□□□□ -1.47
PDLIM7Q9NR12 Y_RNA.582-201ENST00000391023 95 ntBASIC5.87□□□□□ -1.47
PDLIM7Q9NR12 AL161909.1-201ENST00000397390 712 ntBASIC5.87□□□□□ -1.47
PDLIM7Q9NR12 SNORA11C-201ENST00000408532 129 ntBASIC5.87□□□□□ -1.47
PDLIM7Q9NR12 RN7SKP56-201ENST00000410513 331 ntBASIC5.87□□□□□ -1.47
PDLIM7Q9NR12 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC5.87□□□□□ -1.47
PDLIM7Q9NR12 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.87□□□□□ -1.47
PDLIM7Q9NR12 RPL21P32-201ENST00000419877 477 ntBASIC5.87□□□□□ -1.47
PDLIM7Q9NR12 AC092647.1-201ENST00000420654 287 ntBASIC5.87□□□□□ -1.47
PDLIM7Q9NR12 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
PDLIM7Q9NR12 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC5.87□□□□□ -1.47
PDLIM7Q9NR12 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC5.87□□□□□ -1.47
PDLIM7Q9NR12 BLOC1S2P1-201ENST00000428431 301 ntBASIC5.87□□□□□ -1.47
PDLIM7Q9NR12 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC5.87□□□□□ -1.47
PDLIM7Q9NR12 B3GNT2P1-201ENST00000434960 952 ntBASIC5.87□□□□□ -1.47
PDLIM7Q9NR12 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC5.87□□□□□ -1.47
PDLIM7Q9NR12 AL662791.1-201ENST00000441992 928 ntBASIC5.87□□□□□ -1.47
PDLIM7Q9NR12 MTND5P20-201ENST00000448677 143 ntBASIC5.87□□□□□ -1.47
PDLIM7Q9NR12 AC104306.1-201ENST00000449702 371 ntBASIC5.87□□□□□ -1.47
PDLIM7Q9NR12 ARPC3P2-201ENST00000457786 533 ntBASIC5.87□□□□□ -1.47
PDLIM7Q9NR12 AC079168.1-201ENST00000458741 345 ntBASIC5.87□□□□□ -1.47
PDLIM7Q9NR12 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.87□□□□□ -1.47
PDLIM7Q9NR12 RN7SL354P-201ENST00000469282 294 ntBASIC5.87□□□□□ -1.47
PDLIM7Q9NR12 AC104687.1-201ENST00000485829 412 ntBASIC5.87□□□□□ -1.47
PDLIM7Q9NR12 RPL9P6-201ENST00000492764 598 ntBASIC5.87□□□□□ -1.47
PDLIM7Q9NR12 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.87□□□□□ -1.47
PDLIM7Q9NR12 FAM92A1P2-202ENST00000504766 877 ntBASIC5.87□□□□□ -1.47
PDLIM7Q9NR12 AC117522.1-201ENST00000509821 380 ntBASIC5.87□□□□□ -1.47
PDLIM7Q9NR12 Y_RNA.702-201ENST00000516843 96 ntBASIC5.87□□□□□ -1.47
PDLIM7Q9NR12 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC5.87□□□□□ -1.47
PDLIM7Q9NR12 AP003080.1-202ENST00000526526 915 ntBASIC5.87□□□□□ -1.47
PDLIM7Q9NR12 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.87□□□□□ -1.47
PDLIM7Q9NR12 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC5.87□□□□□ -1.47
PDLIM7Q9NR12 PCMTD1P2-201ENST00000565017 355 ntBASIC5.87□□□□□ -1.47
PDLIM7Q9NR12 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC5.87□□□□□ -1.47
PDLIM7Q9NR12 MIR548Y-201ENST00000582739 110 ntBASIC5.87□□□□□ -1.47
PDLIM7Q9NR12 MIR4691-201ENST00000583764 85 ntBASIC5.87□□□□□ -1.47
PDLIM7Q9NR12 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.87□□□□□ -1.47
PDLIM7Q9NR12 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 143 ms