Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HPS4Q9NQG7 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
HPS4Q9NQG7 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HPS4Q9NQG7 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
HPS4Q9NQG7 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
HPS4Q9NQG7 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
HPS4Q9NQG7 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.35□□□□□ -1.71
HPS4Q9NQG7 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
HPS4Q9NQG7 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
HPS4Q9NQG7 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
HPS4Q9NQG7 RN7SKP202-201ENST00000410439 330 ntBASIC4.35□□□□□ -1.71
HPS4Q9NQG7 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.35□□□□□ -1.71
HPS4Q9NQG7 AC108032.1-201ENST00000416706 207 ntBASIC4.35□□□□□ -1.71
HPS4Q9NQG7 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.35□□□□□ -1.71
HPS4Q9NQG7 EIF1P3-201ENST00000423841 334 ntBASIC4.35□□□□□ -1.71
HPS4Q9NQG7 NFU1-207ENST00000462320 558 ntTSL 4 BASIC4.35□□□□□ -1.71
HPS4Q9NQG7 AC018635.1-201ENST00000468292 1030 ntBASIC4.35□□□□□ -1.71
HPS4Q9NQG7 RN7SL132P-201ENST00000478131 296 ntBASIC4.35□□□□□ -1.71
HPS4Q9NQG7 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.35□□□□□ -1.71
HPS4Q9NQG7 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4.35□□□□□ -1.71
HPS4Q9NQG7 MTND4LP31-201ENST00000514859 294 ntBASIC4.35□□□□□ -1.71
HPS4Q9NQG7 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC4.35□□□□□ -1.71
HPS4Q9NQG7 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.35□□□□□ -1.71
HPS4Q9NQG7 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
HPS4Q9NQG7 AP003168.1-201ENST00000530091 307 ntBASIC4.35□□□□□ -1.71
HPS4Q9NQG7 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HPS4Q9NQG7 AC007424.1-203ENST00000554613 687 ntBASIC4.35□□□□□ -1.71
HPS4Q9NQG7 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.35□□□□□ -1.71
HPS4Q9NQG7 AC053481.4-201ENST00000583164 216 ntBASIC4.35□□□□□ -1.71
HPS4Q9NQG7 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.35□□□□□ -1.71
HPS4Q9NQG7 AC005034.4-201ENST00000603612 899 ntBASIC4.35□□□□□ -1.71
HPS4Q9NQG7 MIR7973-1-201ENST00000614683 76 ntBASIC4.35□□□□□ -1.71
HPS4Q9NQG7 AC006133.1-201ENST00000617106 264 ntBASIC4.35□□□□□ -1.71
HPS4Q9NQG7 AL356863.1-201ENST00000623378 1080 ntBASIC4.35□□□□□ -1.71
HPS4Q9NQG7 AC015726.3-201ENST00000624501 418 ntBASIC4.35□□□□□ -1.71
HPS4Q9NQG7 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
HPS4Q9NQG7 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.35□□□□□ -1.71
HPS4Q9NQG7 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HPS4Q9NQG7 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HPS4Q9NQG7 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HPS4Q9NQG7 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
HPS4Q9NQG7 AC068254.2-201ENST00000623938 3577 ntBASIC4.34□□□□□ -1.71
HPS4Q9NQG7 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.34□□□□□ -1.71
HPS4Q9NQG7 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HPS4Q9NQG7 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.34□□□□□ -1.71
HPS4Q9NQG7 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
HPS4Q9NQG7 RNA5SP104-201ENST00000410989 118 ntBASIC4.34□□□□□ -1.71
HPS4Q9NQG7 XKRYP4-201ENST00000414395 483 ntBASIC4.34□□□□□ -1.71
HPS4Q9NQG7 MTND4P11-201ENST00000417020 1058 ntBASIC4.34□□□□□ -1.71
HPS4Q9NQG7 MTCO3P4-201ENST00000419236 787 ntBASIC4.34□□□□□ -1.71
HPS4Q9NQG7 RPL30P3-201ENST00000424262 333 ntBASIC4.34□□□□□ -1.71
HPS4Q9NQG7 FO393419.3-201ENST00000428741 282 ntBASIC4.34□□□□□ -1.71
HPS4Q9NQG7 SKP1P3-201ENST00000429280 487 ntBASIC4.34□□□□□ -1.71
HPS4Q9NQG7 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.34□□□□□ -1.71
HPS4Q9NQG7 AL035458.1-201ENST00000433096 585 ntBASIC4.34□□□□□ -1.71
HPS4Q9NQG7 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.34□□□□□ -1.71
HPS4Q9NQG7 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.34□□□□□ -1.71
HPS4Q9NQG7 XKRYP5-201ENST00000449659 483 ntBASIC4.34□□□□□ -1.71
HPS4Q9NQG7 RPL23AP23-201ENST00000452590 471 ntBASIC4.34□□□□□ -1.71
HPS4Q9NQG7 RNA5SP246-201ENST00000458909 119 ntBASIC4.34□□□□□ -1.71
HPS4Q9NQG7 AF213884.1-201ENST00000488102 463 ntBASIC4.34□□□□□ -1.71
HPS4Q9NQG7 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.34□□□□□ -1.71
HPS4Q9NQG7 SNORA31.13-201ENST00000516624 135 ntBASIC4.34□□□□□ -1.71
HPS4Q9NQG7 IGLV3-26-201ENST00000520756 302 ntBASIC4.34□□□□□ -1.71
HPS4Q9NQG7 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC4.34□□□□□ -1.71
HPS4Q9NQG7 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.34□□□□□ -1.71
HPS4Q9NQG7 AC135001.1-201ENST00000544546 283 ntBASIC4.34□□□□□ -1.71
HPS4Q9NQG7 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.34□□□□□ -1.71
HPS4Q9NQG7 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.34□□□□□ -1.71
HPS4Q9NQG7 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC4.34□□□□□ -1.71
HPS4Q9NQG7 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4.34□□□□□ -1.71
HPS4Q9NQG7 AC025918.2-201ENST00000558683 763 ntBASIC4.34□□□□□ -1.71
HPS4Q9NQG7 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.34□□□□□ -1.71
HPS4Q9NQG7 MIR3158-1-201ENST00000583596 81 ntBASIC4.34□□□□□ -1.71
HPS4Q9NQG7 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.34□□□□□ -1.71
HPS4Q9NQG7 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC4.34□□□□□ -1.71
HPS4Q9NQG7 AC083899.3-201ENST00000603413 594 ntBASIC4.34□□□□□ -1.71
HPS4Q9NQG7 AL139286.1-201ENST00000604465 483 ntBASIC4.34□□□□□ -1.71
HPS4Q9NQG7 KATNBL1P5-201ENST00000605015 517 ntBASIC4.34□□□□□ -1.71
HPS4Q9NQG7 AL162574.2-201ENST00000614618 657 ntBASIC4.34□□□□□ -1.71
HPS4Q9NQG7 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC4.34□□□□□ -1.71
HPS4Q9NQG7 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
HPS4Q9NQG7 AC073592.7-201ENST00000623659 507 ntBASIC4.34□□□□□ -1.71
HPS4Q9NQG7 OR8B1P-202ENST00000641132 1178 ntBASIC4.34□□□□□ -1.71
HPS4Q9NQG7 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HPS4Q9NQG7 MTCO1P14-201ENST00000441695 1559 ntBASIC4.34□□□□□ -1.71
HPS4Q9NQG7 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HPS4Q9NQG7 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HPS4Q9NQG7 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HPS4Q9NQG7 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.33□□□□□ -1.72
HPS4Q9NQG7 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
HPS4Q9NQG7 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
HPS4Q9NQG7 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HPS4Q9NQG7 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
HPS4Q9NQG7 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HPS4Q9NQG7 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
HPS4Q9NQG7 RNU6-317P-201ENST00000384031 107 ntBASIC4.33□□□□□ -1.72
HPS4Q9NQG7 MIR93-201ENST00000385024 80 ntBASIC4.33□□□□□ -1.72
HPS4Q9NQG7 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.33□□□□□ -1.72
HPS4Q9NQG7 ATP5F1P3-201ENST00000397213 657 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms