Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
RTN4Q9NQC3 TTTY25P-201ENST00000558356 1505 ntBASIC8.46□□□□□ -1.05
RTN4Q9NQC3 GAGE2A-201ENST00000362097 528 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
RTN4Q9NQC3 Y_RNA.167-201ENST00000363735 109 ntBASIC8.46□□□□□ -1.06
RTN4Q9NQC3 Y_RNA.339-201ENST00000365325 102 ntBASIC8.46□□□□□ -1.06
RTN4Q9NQC3 UCMA-201ENST00000378681 826 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
RTN4Q9NQC3 RNA5SP203-201ENST00000410451 136 ntBASIC8.46□□□□□ -1.06
RTN4Q9NQC3 OR13D3P-201ENST00000412501 937 ntBASIC8.46□□□□□ -1.06
RTN4Q9NQC3 AC080125.1-201ENST00000414888 684 ntBASIC8.46□□□□□ -1.06
RTN4Q9NQC3 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC8.46□□□□□ -1.06
RTN4Q9NQC3 MYB-206ENST00000420123 1051 ntTSL 5 BASIC8.46□□□□□ -1.06
RTN4Q9NQC3 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC8.46□□□□□ -1.06
RTN4Q9NQC3 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC8.46□□□□□ -1.06
RTN4Q9NQC3 AL451139.1-201ENST00000434718 346 ntBASIC8.46□□□□□ -1.06
RTN4Q9NQC3 AL161722.2-201ENST00000434731 981 ntBASIC8.46□□□□□ -1.06
RTN4Q9NQC3 AL512366.1-201ENST00000438919 636 ntTSL 3 BASIC8.46□□□□□ -1.06
RTN4Q9NQC3 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC8.46□□□□□ -1.06
RTN4Q9NQC3 AC006159.1-201ENST00000452009 386 ntTSL 5 BASIC8.46□□□□□ -1.06
RTN4Q9NQC3 MED28P8-201ENST00000454831 521 ntBASIC8.46□□□□□ -1.06
RTN4Q9NQC3 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC8.46□□□□□ -1.06
RTN4Q9NQC3 VN1R17P-201ENST00000472048 1090 ntBASIC8.46□□□□□ -1.06
RTN4Q9NQC3 SYNPR-208ENST00000472899 527 ntTSL 4 BASIC8.46□□□□□ -1.06
RTN4Q9NQC3 AC025271.1-201ENST00000485045 429 ntBASIC8.46□□□□□ -1.06
RTN4Q9NQC3 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC8.46□□□□□ -1.06
RTN4Q9NQC3 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC8.46□□□□□ -1.06
RTN4Q9NQC3 AC095057.1-201ENST00000507583 168 ntBASIC8.46□□□□□ -1.06
RTN4Q9NQC3 RBBP4P6-201ENST00000508098 202 ntBASIC8.46□□□□□ -1.06
RTN4Q9NQC3 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC8.46□□□□□ -1.06
RTN4Q9NQC3 HMGN1P9-201ENST00000515212 298 ntBASIC8.46□□□□□ -1.06
RTN4Q9NQC3 AP006587.4-201ENST00000526053 529 ntBASIC8.46□□□□□ -1.06
RTN4Q9NQC3 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC8.46□□□□□ -1.06
RTN4Q9NQC3 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC8.46□□□□□ -1.06
RTN4Q9NQC3 AC135001.1-201ENST00000544546 283 ntBASIC8.46□□□□□ -1.06
RTN4Q9NQC3 AL109628.2-201ENST00000554037 201 ntBASIC8.46□□□□□ -1.06
RTN4Q9NQC3 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC8.46□□□□□ -1.06
RTN4Q9NQC3 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC8.46□□□□□ -1.06
RTN4Q9NQC3 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC8.46□□□□□ -1.06
RTN4Q9NQC3 AP005210.1-201ENST00000583659 544 ntTSL 2 BASIC8.46□□□□□ -1.06
RTN4Q9NQC3 APOC2-202ENST00000585786 880 ntTSL 2 BASIC8.46□□□□□ -1.06
RTN4Q9NQC3 AC005758.1-201ENST00000586408 625 ntBASIC8.46□□□□□ -1.06
RTN4Q9NQC3 ZNF98-205ENST00000601553 566 ntTSL 3 BASIC8.46□□□□□ -1.06
RTN4Q9NQC3 AC245389.1-201ENST00000605141 529 ntBASIC8.46□□□□□ -1.06
RTN4Q9NQC3 OR6L2P-201ENST00000608207 925 ntBASIC8.46□□□□□ -1.06
RTN4Q9NQC3 AL021918.2-201ENST00000613415 194 ntBASIC8.46□□□□□ -1.06
RTN4Q9NQC3 Metazoa_SRP.192-201ENST00000616260 286 ntBASIC8.46□□□□□ -1.06
RTN4Q9NQC3 OR1N1-202ENST00000619659 939 ntBASIC8.46□□□□□ -1.06
RTN4Q9NQC3 AC012557.3-201ENST00000626439 255 ntBASIC8.46□□□□□ -1.06
RTN4Q9NQC3 PCBP1-AS1-322ENST00000628147 553 ntTSL 5 BASIC8.46□□□□□ -1.06
RTN4Q9NQC3 SOCS5P3-201ENST00000425115 1576 ntBASIC8.46□□□□□ -1.06
RTN4Q9NQC3 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
RTN4Q9NQC3 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
RTN4Q9NQC3 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC8.46□□□□□ -1.06
RTN4Q9NQC3 CRBN-201ENST00000231948 2206 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.06
RTN4Q9NQC3 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC8.46□□□□□ -1.06
RTN4Q9NQC3 CCDC77-210ENST00000540180 1652 ntAPPRIS ALT2 TSL 2 BASIC8.46□□□□□ -1.06
RTN4Q9NQC3 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
RTN4Q9NQC3 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
RTN4Q9NQC3 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
RTN4Q9NQC3 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
RTN4Q9NQC3 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC8.45□□□□□ -1.06
RTN4Q9NQC3 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
RTN4Q9NQC3 FHL5-203ENST00000541107 1904 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
RTN4Q9NQC3 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
RTN4Q9NQC3 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC8.45□□□□□ -1.06
RTN4Q9NQC3 AL391684.1-202ENST00000641293 1636 ntBASIC8.45□□□□□ -1.06
RTN4Q9NQC3 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
RTN4Q9NQC3 AC234778.1-201ENST00000399253 370 ntBASIC8.45□□□□□ -1.06
RTN4Q9NQC3 AL583834.1-201ENST00000406943 343 ntBASIC8.45□□□□□ -1.06
RTN4Q9NQC3 U3.34-201ENST00000408198 212 ntBASIC8.45□□□□□ -1.06
RTN4Q9NQC3 MIR548P-201ENST00000408336 84 ntBASIC8.45□□□□□ -1.06
RTN4Q9NQC3 RN7SKP158-201ENST00000410453 326 ntBASIC8.45□□□□□ -1.06
RTN4Q9NQC3 LINC01980-202ENST00000425195 491 ntTSL 3 BASIC8.45□□□□□ -1.06
RTN4Q9NQC3 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC8.45□□□□□ -1.06
RTN4Q9NQC3 SNAP23P1-201ENST00000433229 246 ntBASIC8.45□□□□□ -1.06
RTN4Q9NQC3 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC8.45□□□□□ -1.06
RTN4Q9NQC3 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC8.45□□□□□ -1.06
RTN4Q9NQC3 RPL37P6-201ENST00000460682 294 ntBASIC8.45□□□□□ -1.06
RTN4Q9NQC3 AC234782.3-201ENST00000461229 433 ntBASIC8.45□□□□□ -1.06
RTN4Q9NQC3 AC130509.1-201ENST00000464158 433 ntBASIC8.45□□□□□ -1.06
RTN4Q9NQC3 AC096576.1-201ENST00000489014 359 ntBASIC8.45□□□□□ -1.06
RTN4Q9NQC3 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC8.45□□□□□ -1.06
RTN4Q9NQC3 GMPSP1-201ENST00000514075 579 ntBASIC8.45□□□□□ -1.06
RTN4Q9NQC3 RN7SKP13-201ENST00000515933 244 ntBASIC8.45□□□□□ -1.06
RTN4Q9NQC3 RN7SKP258-201ENST00000517151 304 ntBASIC8.45□□□□□ -1.06
RTN4Q9NQC3 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC8.45□□□□□ -1.06
RTN4Q9NQC3 SNRPCP14-201ENST00000524498 205 ntBASIC8.45□□□□□ -1.06
RTN4Q9NQC3 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC8.45□□□□□ -1.06
RTN4Q9NQC3 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC8.45□□□□□ -1.06
RTN4Q9NQC3 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC8.45□□□□□ -1.06
RTN4Q9NQC3 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC8.45□□□□□ -1.06
RTN4Q9NQC3 CRTC3-AS1-201ENST00000558105 502 ntTSL 5 BASIC8.45□□□□□ -1.06
RTN4Q9NQC3 MIR4790-201ENST00000577799 79 ntBASIC8.45□□□□□ -1.06
RTN4Q9NQC3 MIR3714-201ENST00000579507 65 ntBASIC8.45□□□□□ -1.06
RTN4Q9NQC3 MIR5583-1-201ENST00000580941 59 ntBASIC8.45□□□□□ -1.06
RTN4Q9NQC3 AP000915.2-201ENST00000582120 454 ntTSL 3 BASIC8.45□□□□□ -1.06
RTN4Q9NQC3 MIR3942-201ENST00000585264 109 ntBASIC8.45□□□□□ -1.06
RTN4Q9NQC3 DPPA3P3-201ENST00000603842 430 ntBASIC8.45□□□□□ -1.06
RTN4Q9NQC3 AL158032.1-201ENST00000605401 106 ntBASIC8.45□□□□□ -1.06
RTN4Q9NQC3 AC133104.2-201ENST00000615272 193 ntBASIC8.45□□□□□ -1.06
RTN4Q9NQC3 AC006453.3-201ENST00000635891 377 ntBASIC8.45□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms