Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.81□□□□□ -1.64
EBF3Q9H4W6 AC233289.1-201ENST00000403700 508 ntBASIC4.81□□□□□ -1.64
EBF3Q9H4W6 GSTA8P-201ENST00000404253 637 ntBASIC4.81□□□□□ -1.64
EBF3Q9H4W6 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
EBF3Q9H4W6 ATF1P1-201ENST00000406040 927 ntBASIC4.81□□□□□ -1.64
EBF3Q9H4W6 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC4.81□□□□□ -1.64
EBF3Q9H4W6 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.81□□□□□ -1.64
EBF3Q9H4W6 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC4.81□□□□□ -1.64
EBF3Q9H4W6 OR5BE1P-201ENST00000425977 939 ntBASIC4.81□□□□□ -1.64
EBF3Q9H4W6 VDAC1P6-201ENST00000430062 855 ntBASIC4.81□□□□□ -1.64
EBF3Q9H4W6 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.81□□□□□ -1.64
EBF3Q9H4W6 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.81□□□□□ -1.64
EBF3Q9H4W6 AL008629.1-201ENST00000438615 184 ntBASIC4.81□□□□□ -1.64
EBF3Q9H4W6 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.81□□□□□ -1.64
EBF3Q9H4W6 UBE2D3P4-201ENST00000441973 436 ntBASIC4.81□□□□□ -1.64
EBF3Q9H4W6 HSFY3P-201ENST00000444242 1191 ntBASIC4.81□□□□□ -1.64
EBF3Q9H4W6 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.81□□□□□ -1.64
EBF3Q9H4W6 AC073587.1-201ENST00000447093 876 ntBASIC4.81□□□□□ -1.64
EBF3Q9H4W6 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC4.81□□□□□ -1.64
EBF3Q9H4W6 AC002553.2-201ENST00000453217 340 ntBASIC4.81□□□□□ -1.64
EBF3Q9H4W6 RPL31P3-201ENST00000458430 332 ntBASIC4.81□□□□□ -1.64
EBF3Q9H4W6 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.81□□□□□ -1.64
EBF3Q9H4W6 AC011037.1-201ENST00000483964 558 ntBASIC4.81□□□□□ -1.64
EBF3Q9H4W6 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.81□□□□□ -1.64
EBF3Q9H4W6 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.81□□□□□ -1.64
EBF3Q9H4W6 AC111000.2-201ENST00000507775 550 ntBASIC4.81□□□□□ -1.64
EBF3Q9H4W6 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.81□□□□□ -1.64
EBF3Q9H4W6 RNU6-1028P-201ENST00000517164 93 ntBASIC4.81□□□□□ -1.64
EBF3Q9H4W6 AC105185.1-201ENST00000518705 535 ntBASIC4.81□□□□□ -1.64
EBF3Q9H4W6 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.81□□□□□ -1.64
EBF3Q9H4W6 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.81□□□□□ -1.64
EBF3Q9H4W6 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.81□□□□□ -1.64
EBF3Q9H4W6 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.81□□□□□ -1.64
EBF3Q9H4W6 AC023161.2-201ENST00000551218 780 ntBASIC4.81□□□□□ -1.64
EBF3Q9H4W6 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.81□□□□□ -1.64
EBF3Q9H4W6 AC023575.1-201ENST00000580510 358 ntBASIC4.81□□□□□ -1.64
EBF3Q9H4W6 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.81□□□□□ -1.64
EBF3Q9H4W6 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC4.81□□□□□ -1.64
EBF3Q9H4W6 AC020910.2-201ENST00000603635 610 ntBASIC4.81□□□□□ -1.64
EBF3Q9H4W6 AC233280.2-201ENST00000603917 1070 ntBASIC4.81□□□□□ -1.64
EBF3Q9H4W6 WT1-AS_8.1-201ENST00000615200 275 ntBASIC4.81□□□□□ -1.64
EBF3Q9H4W6 AL121895.2-201ENST00000619558 447 ntBASIC4.81□□□□□ -1.64
EBF3Q9H4W6 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.81□□□□□ -1.64
EBF3Q9H4W6 AC011944.2-201ENST00000624440 683 ntBASIC4.81□□□□□ -1.64
EBF3Q9H4W6 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC4.81□□□□□ -1.64
EBF3Q9H4W6 AC103706.2-201ENST00000638080 240 ntBASIC4.81□□□□□ -1.64
EBF3Q9H4W6 OR5BE1P-202ENST00000641168 1176 ntBASIC4.81□□□□□ -1.64
EBF3Q9H4W6 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
EBF3Q9H4W6 AC104118.1-201ENST00000607625 1589 ntBASIC4.81□□□□□ -1.64
EBF3Q9H4W6 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
EBF3Q9H4W6 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
EBF3Q9H4W6 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
EBF3Q9H4W6 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
EBF3Q9H4W6 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
EBF3Q9H4W6 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
EBF3Q9H4W6 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
EBF3Q9H4W6 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
EBF3Q9H4W6 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
EBF3Q9H4W6 AL136164.3-201ENST00000624429 3978 ntBASIC4.8□□□□□ -1.64
EBF3Q9H4W6 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.8□□□□□ -1.64
EBF3Q9H4W6 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
EBF3Q9H4W6 AC025031.4-201ENST00000621248 3271 ntBASIC4.8□□□□□ -1.64
EBF3Q9H4W6 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
EBF3Q9H4W6 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
EBF3Q9H4W6 RNU6-236P-201ENST00000363886 106 ntBASIC4.8□□□□□ -1.64
EBF3Q9H4W6 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
EBF3Q9H4W6 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
EBF3Q9H4W6 RNU6-636P-201ENST00000384598 107 ntBASIC4.8□□□□□ -1.64
EBF3Q9H4W6 MIR137-201ENST00000385223 102 ntBASIC4.8□□□□□ -1.64
EBF3Q9H4W6 AL590762.2-201ENST00000395798 571 ntBASIC4.8□□□□□ -1.64
EBF3Q9H4W6 RNA5SP146-201ENST00000410743 123 ntBASIC4.8□□□□□ -1.64
EBF3Q9H4W6 RAP1BP1-201ENST00000412709 553 ntBASIC4.8□□□□□ -1.64
EBF3Q9H4W6 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.8□□□□□ -1.64
EBF3Q9H4W6 PTP4A1P5-201ENST00000420305 455 ntBASIC4.8□□□□□ -1.64
EBF3Q9H4W6 GAPDHP49-201ENST00000421421 961 ntBASIC4.8□□□□□ -1.64
EBF3Q9H4W6 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC4.8□□□□□ -1.64
EBF3Q9H4W6 AL513175.2-201ENST00000422071 443 ntBASIC4.8□□□□□ -1.64
EBF3Q9H4W6 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.8□□□□□ -1.64
EBF3Q9H4W6 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.8□□□□□ -1.64
EBF3Q9H4W6 ARAFP2-201ENST00000440565 559 ntBASIC4.8□□□□□ -1.64
EBF3Q9H4W6 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.8□□□□□ -1.64
EBF3Q9H4W6 AC023512.1-201ENST00000444513 499 ntBASIC4.8□□□□□ -1.64
EBF3Q9H4W6 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
EBF3Q9H4W6 AL096803.2-201ENST00000450032 677 ntBASIC4.8□□□□□ -1.64
EBF3Q9H4W6 HMGB1P5-202ENST00000451497 985 ntBASIC4.8□□□□□ -1.64
EBF3Q9H4W6 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
EBF3Q9H4W6 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.8□□□□□ -1.64
EBF3Q9H4W6 PPIAP21-201ENST00000464473 501 ntBASIC4.8□□□□□ -1.64
EBF3Q9H4W6 AC091860.1-201ENST00000505723 432 ntBASIC4.8□□□□□ -1.64
EBF3Q9H4W6 AC007016.1-201ENST00000512110 244 ntBASIC4.8□□□□□ -1.64
EBF3Q9H4W6 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.8□□□□□ -1.64
EBF3Q9H4W6 RN7SKP141-201ENST00000516167 338 ntBASIC4.8□□□□□ -1.64
EBF3Q9H4W6 RNU5A-4P-201ENST00000516588 111 ntBASIC4.8□□□□□ -1.64
EBF3Q9H4W6 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
EBF3Q9H4W6 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.8□□□□□ -1.64
EBF3Q9H4W6 MTCO1P49-201ENST00000523429 802 ntBASIC4.8□□□□□ -1.64
EBF3Q9H4W6 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.8□□□□□ -1.64
EBF3Q9H4W6 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
EBF3Q9H4W6 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.8□□□□□ -1.64
EBF3Q9H4W6 DUX4L52-201ENST00000549363 777 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms