Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AC105031.1-201ENST00000518550 476 ntBASIC4.85□□□□□ -1.63
AMBRA1Q9C0C7 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
AMBRA1Q9C0C7 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC4.85□□□□□ -1.63
AMBRA1Q9C0C7 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
AMBRA1Q9C0C7 BNIP3P1-201ENST00000547295 580 ntBASIC4.85□□□□□ -1.63
AMBRA1Q9C0C7 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.85□□□□□ -1.63
AMBRA1Q9C0C7 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.85□□□□□ -1.63
AMBRA1Q9C0C7 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
AMBRA1Q9C0C7 AC068276.1-201ENST00000605793 379 ntBASIC4.85□□□□□ -1.63
AMBRA1Q9C0C7 AC024560.3-201ENST00000608482 349 ntBASIC4.85□□□□□ -1.63
AMBRA1Q9C0C7 AC025594.3-201ENST00000613068 790 ntBASIC4.85□□□□□ -1.63
AMBRA1Q9C0C7 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
AMBRA1Q9C0C7 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.85□□□□□ -1.63
AMBRA1Q9C0C7 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.85□□□□□ -1.63
AMBRA1Q9C0C7 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.85□□□□□ -1.63
AMBRA1Q9C0C7 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
AMBRA1Q9C0C7 ZNF652P1-201ENST00000442420 1309 ntBASIC4.85□□□□□ -1.63
AMBRA1Q9C0C7 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
AMBRA1Q9C0C7 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.85□□□□□ -1.63
AMBRA1Q9C0C7 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
AMBRA1Q9C0C7 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.85□□□□□ -1.63
AMBRA1Q9C0C7 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
AMBRA1Q9C0C7 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.85□□□□□ -1.63
AMBRA1Q9C0C7 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
AMBRA1Q9C0C7 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
AMBRA1Q9C0C7 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.85□□□□□ -1.63
AMBRA1Q9C0C7 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.85□□□□□ -1.63
AMBRA1Q9C0C7 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
AMBRA1Q9C0C7 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.85□□□□□ -1.63
AMBRA1Q9C0C7 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.84□□□□□ -1.63
AMBRA1Q9C0C7 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
AMBRA1Q9C0C7 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
AMBRA1Q9C0C7 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.84□□□□□ -1.63
AMBRA1Q9C0C7 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
AMBRA1Q9C0C7 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.84□□□□□ -1.63
AMBRA1Q9C0C7 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.84□□□□□ -1.63
AMBRA1Q9C0C7 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
AMBRA1Q9C0C7 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
AMBRA1Q9C0C7 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
AMBRA1Q9C0C7 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.84□□□□□ -1.63
AMBRA1Q9C0C7 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
AMBRA1Q9C0C7 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
AMBRA1Q9C0C7 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC4.84□□□□□ -1.63
AMBRA1Q9C0C7 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
AMBRA1Q9C0C7 RBPJP2-201ENST00000618187 1444 ntBASIC4.84□□□□□ -1.63
AMBRA1Q9C0C7 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.84□□□□□ -1.63
AMBRA1Q9C0C7 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
AMBRA1Q9C0C7 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
AMBRA1Q9C0C7 MIR133B-201ENST00000362210 119 ntBASIC4.84□□□□□ -1.63
AMBRA1Q9C0C7 Y_RNA.302-201ENST00000364997 102 ntBASIC4.84□□□□□ -1.63
AMBRA1Q9C0C7 Y_RNA.359-201ENST00000365498 102 ntBASIC4.84□□□□□ -1.63
AMBRA1Q9C0C7 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
AMBRA1Q9C0C7 RNU6-517P-201ENST00000384362 110 ntBASIC4.84□□□□□ -1.63
AMBRA1Q9C0C7 AL645927.1-201ENST00000396783 406 ntBASIC4.84□□□□□ -1.63
AMBRA1Q9C0C7 AL078599.1-201ENST00000402075 293 ntBASIC4.84□□□□□ -1.63
AMBRA1Q9C0C7 RN7SKP125-201ENST00000410481 302 ntBASIC4.84□□□□□ -1.63
AMBRA1Q9C0C7 AC007899.1-201ENST00000412776 775 ntBASIC4.84□□□□□ -1.63
AMBRA1Q9C0C7 AL139128.1-201ENST00000413921 941 ntBASIC4.84□□□□□ -1.63
AMBRA1Q9C0C7 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.84□□□□□ -1.63
AMBRA1Q9C0C7 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC4.84□□□□□ -1.63
AMBRA1Q9C0C7 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.84□□□□□ -1.63
AMBRA1Q9C0C7 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.84□□□□□ -1.63
AMBRA1Q9C0C7 AC004865.1-201ENST00000442276 1003 ntBASIC4.84□□□□□ -1.63
AMBRA1Q9C0C7 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC4.84□□□□□ -1.63
AMBRA1Q9C0C7 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.84□□□□□ -1.63
AMBRA1Q9C0C7 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC4.84□□□□□ -1.63
AMBRA1Q9C0C7 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC4.84□□□□□ -1.63
AMBRA1Q9C0C7 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC4.84□□□□□ -1.63
AMBRA1Q9C0C7 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.84□□□□□ -1.63
AMBRA1Q9C0C7 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.84□□□□□ -1.63
AMBRA1Q9C0C7 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC4.84□□□□□ -1.63
AMBRA1Q9C0C7 SUMO2P2-201ENST00000456482 255 ntBASIC4.84□□□□□ -1.63
AMBRA1Q9C0C7 RPL7P16-201ENST00000479738 738 ntBASIC4.84□□□□□ -1.63
AMBRA1Q9C0C7 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC4.84□□□□□ -1.63
AMBRA1Q9C0C7 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.84□□□□□ -1.63
AMBRA1Q9C0C7 NDUFA5P12-201ENST00000503796 343 ntBASIC4.84□□□□□ -1.63
AMBRA1Q9C0C7 AC006499.5-201ENST00000505037 514 ntBASIC4.84□□□□□ -1.63
AMBRA1Q9C0C7 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
AMBRA1Q9C0C7 CDC42P4-201ENST00000510507 563 ntBASIC4.84□□□□□ -1.63
AMBRA1Q9C0C7 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.84□□□□□ -1.63
AMBRA1Q9C0C7 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
AMBRA1Q9C0C7 AC006427.1-201ENST00000514359 712 ntBASIC4.84□□□□□ -1.63
AMBRA1Q9C0C7 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.84□□□□□ -1.63
AMBRA1Q9C0C7 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.84□□□□□ -1.63
AMBRA1Q9C0C7 HMGN2P6-201ENST00000551091 273 ntBASIC4.84□□□□□ -1.63
AMBRA1Q9C0C7 AL512347.1-201ENST00000566420 503 ntBASIC4.84□□□□□ -1.63
AMBRA1Q9C0C7 ABBA01006766.1-201ENST00000584728 294 ntBASIC4.84□□□□□ -1.63
AMBRA1Q9C0C7 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.84□□□□□ -1.63
AMBRA1Q9C0C7 AC087683.1-201ENST00000591187 441 ntBASIC4.84□□□□□ -1.63
AMBRA1Q9C0C7 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
AMBRA1Q9C0C7 AC008814.1-201ENST00000603797 406 ntBASIC4.84□□□□□ -1.63
AMBRA1Q9C0C7 AC000068.2-201ENST00000608816 460 ntBASIC4.84□□□□□ -1.63
AMBRA1Q9C0C7 Z95327.3-201ENST00000610385 572 ntBASIC4.84□□□□□ -1.63
AMBRA1Q9C0C7 AC092650.2-201ENST00000619984 902 ntBASIC4.84□□□□□ -1.63
AMBRA1Q9C0C7 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.84□□□□□ -1.63
AMBRA1Q9C0C7 CDRT1-208ENST00000630868 794 ntBASIC4.84□□□□□ -1.63
AMBRA1Q9C0C7 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.84□□□□□ -1.63
AMBRA1Q9C0C7 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
AMBRA1Q9C0C7 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
AMBRA1Q9C0C7 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 133.1 ms