Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 AC092079.1-201ENST00000558620 1985 ntBASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 NGDN-201ENST00000397154 2204 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 AC079178.2-201ENST00000439323 1624 ntBASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 AC006058.1-201ENST00000568686 5067 ntBASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 EVI2A-203ENST00000462804 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 SPATA31C1-201ENST00000420021 3895 ntBASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 SCAPER-202ENST00000324767 4707 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 RN7SKP174-201ENST00000363803 330 ntBASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 Y_RNA.304-201ENST00000365011 112 ntBASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 Y_RNA.439-201ENST00000384119 94 ntBASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 Y_RNA.533-201ENST00000384596 114 ntBASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 TRBV5-1-201ENST00000390381 652 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 PHBP1-201ENST00000392260 808 ntBASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 AL513475.1-201ENST00000406602 315 ntBASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 RNU2-20P-201ENST00000410425 191 ntBASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 RN7SKP188-201ENST00000410789 317 ntBASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 CELSR3-AS1-201ENST00000421275 196 ntTSL 2 BASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 AL354766.1-201ENST00000423396 542 ntBASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 AL365295.1-204ENST00000425648 553 ntTSL 4 BASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 AC006946.1-201ENST00000429106 328 ntBASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 AC091286.1-201ENST00000431233 461 ntBASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 GAS5-211ENST00000432536 959 ntTSL 2 BASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 RPL3P8-201ENST00000432928 1191 ntBASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 AC099344.1-201ENST00000433548 492 ntBASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 CEACAMP1-201ENST00000434624 1035 ntBASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 AL023584.1-201ENST00000437067 349 ntTSL 3 BASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 CYCSP43-201ENST00000438233 310 ntBASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 AC004866.2-201ENST00000438285 481 ntBASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 RN7SL325P-201ENST00000460434 283 ntBASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 AC026336.1-201ENST00000466577 351 ntBASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 AC087190.1-201ENST00000484462 480 ntBASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 AC107032.1-201ENST00000485945 480 ntBASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 RPS27P20-201ENST00000492051 246 ntBASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 RPL7AP2-201ENST00000496515 740 ntBASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 SEPT14P8-201ENST00000508026 178 ntBASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 AC146944.3-201ENST00000509969 371 ntBASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 RNU6-861P-201ENST00000516745 106 ntBASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 AF186190.1-201ENST00000517470 480 ntBASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 SNRPCP14-201ENST00000524498 205 ntBASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 AP000648.1-201ENST00000529682 397 ntBASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 MRPS36P4-201ENST00000534436 298 ntBASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 AC127381.1-201ENST00000555979 939 ntBASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 AC026461.2-201ENST00000568608 244 ntTSL 5 BASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 AC005154.1-225ENST00000581665 564 ntTSL 4 BASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 AC005828.5-201ENST00000582741 355 ntTSL 4 BASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 AC067852.3-201ENST00000589177 561 ntBASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 MKNK2-211ENST00000591142 875 ntTSL 2 BASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 AL158827.2-201ENST00000602494 330 ntBASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 FXYD6P1-201ENST00000604857 285 ntBASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 AC019322.2-201ENST00000605634 147 ntBASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 AL136985.2-201ENST00000607372 535 ntBASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 AC093799.2-201ENST00000610062 578 ntBASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 AL121985.2-201ENST00000621192 555 ntBASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 AC073488.9-201ENST00000631601 754 ntBASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 AC073488.6-201ENST00000632293 754 ntBASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 AL691447.3-201ENST00000635020 330 ntBASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 OR2A5-202ENST00000641693 8681 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 SPTAN1-222ENST00000630804 7812 ntTSL 5 BASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 RBPJP6-201ENST00000411556 1431 ntBASIC3.78□□□□□ -1.8
KRTAP3-1Q9BYR8 ODF2L-203ENST00000359242 7560 ntTSL 1 (best) BASIC3.78□□□□□ -1.81
KRTAP3-1Q9BYR8 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC3.78□□□□□ -1.81
KRTAP3-1Q9BYR8 EMX2OS-206ENST00000551288 7280 ntTSL 1 (best) BASIC3.78□□□□□ -1.81
KRTAP3-1Q9BYR8 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
KRTAP3-1Q9BYR8 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
KRTAP3-1Q9BYR8 NANOG-201ENST00000229307 5183 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
KRTAP3-1Q9BYR8 EHHADH-201ENST00000231887 3850 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
KRTAP3-1Q9BYR8 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms