Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
TRAIPQ9BWF2 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.61□□□□□ -1.35
TRAIPQ9BWF2 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.61□□□□□ -1.35
TRAIPQ9BWF2 AL359893.1-201ENST00000447628 1580 ntBASIC6.61□□□□□ -1.35
TRAIPQ9BWF2 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
TRAIPQ9BWF2 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
TRAIPQ9BWF2 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.6□□□□□ -1.35
TRAIPQ9BWF2 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC6.6□□□□□ -1.35
TRAIPQ9BWF2 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
TRAIPQ9BWF2 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
TRAIPQ9BWF2 AC092070.2-203ENST00000598377 3644 ntBASIC6.6□□□□□ -1.35
TRAIPQ9BWF2 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.6□□□□□ -1.35
TRAIPQ9BWF2 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
TRAIPQ9BWF2 RN7SKP81-201ENST00000365603 331 ntBASIC6.6□□□□□ -1.35
TRAIPQ9BWF2 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
TRAIPQ9BWF2 Y_RNA.493-201ENST00000384422 102 ntBASIC6.6□□□□□ -1.35
TRAIPQ9BWF2 MIR153-1-201ENST00000384914 90 ntBASIC6.6□□□□□ -1.35
TRAIPQ9BWF2 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.6□□□□□ -1.35
TRAIPQ9BWF2 AL121878.1-201ENST00000418638 859 ntBASIC6.6□□□□□ -1.35
TRAIPQ9BWF2 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC6.6□□□□□ -1.35
TRAIPQ9BWF2 PIGFP2-201ENST00000421400 651 ntBASIC6.6□□□□□ -1.35
TRAIPQ9BWF2 CHEK2P5-201ENST00000423877 246 ntBASIC6.6□□□□□ -1.35
TRAIPQ9BWF2 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC6.6□□□□□ -1.35
TRAIPQ9BWF2 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC6.6□□□□□ -1.35
TRAIPQ9BWF2 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC6.6□□□□□ -1.35
TRAIPQ9BWF2 AC009961.2-201ENST00000435771 251 ntBASIC6.6□□□□□ -1.35
TRAIPQ9BWF2 RPL7P11-201ENST00000437586 658 ntBASIC6.6□□□□□ -1.35
TRAIPQ9BWF2 MTND6P18-201ENST00000439477 513 ntBASIC6.6□□□□□ -1.35
TRAIPQ9BWF2 DNAJC19P5-201ENST00000443295 316 ntBASIC6.6□□□□□ -1.35
TRAIPQ9BWF2 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC6.6□□□□□ -1.35
TRAIPQ9BWF2 RPL29P29-201ENST00000448725 423 ntBASIC6.6□□□□□ -1.35
TRAIPQ9BWF2 PPIAP20-201ENST00000449839 135 ntBASIC6.6□□□□□ -1.35
TRAIPQ9BWF2 AC093392.2-201ENST00000450682 337 ntBASIC6.6□□□□□ -1.35
TRAIPQ9BWF2 AP006222.1-205ENST00000450734 457 ntBASIC6.6□□□□□ -1.35
TRAIPQ9BWF2 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC6.6□□□□□ -1.35
TRAIPQ9BWF2 AC004924.1-201ENST00000480160 781 ntBASIC6.6□□□□□ -1.35
TRAIPQ9BWF2 RPL7P39-201ENST00000481157 744 ntBASIC6.6□□□□□ -1.35
TRAIPQ9BWF2 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC6.6□□□□□ -1.35
TRAIPQ9BWF2 AC104109.1-201ENST00000498563 436 ntBASIC6.6□□□□□ -1.35
TRAIPQ9BWF2 KCTD9P5-201ENST00000504141 1170 ntBASIC6.6□□□□□ -1.35
TRAIPQ9BWF2 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC6.6□□□□□ -1.35
TRAIPQ9BWF2 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC6.6□□□□□ -1.35
TRAIPQ9BWF2 OR4R3P-201ENST00000525084 838 ntBASIC6.6□□□□□ -1.35
TRAIPQ9BWF2 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC6.6□□□□□ -1.35
TRAIPQ9BWF2 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC6.6□□□□□ -1.35
TRAIPQ9BWF2 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.6□□□□□ -1.35
TRAIPQ9BWF2 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC6.6□□□□□ -1.35
TRAIPQ9BWF2 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.6□□□□□ -1.35
TRAIPQ9BWF2 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.6□□□□□ -1.35
TRAIPQ9BWF2 AC091925.2-201ENST00000625059 256 ntBASIC6.6□□□□□ -1.35
TRAIPQ9BWF2 OR13C1P-202ENST00000641378 2919 ntBASIC6.6□□□□□ -1.35
TRAIPQ9BWF2 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.6□□□□□ -1.35
TRAIPQ9BWF2 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.6□□□□□ -1.35
TRAIPQ9BWF2 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.6□□□□□ -1.35
TRAIPQ9BWF2 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.6□□□□□ -1.35
TRAIPQ9BWF2 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.6□□□□□ -1.35
TRAIPQ9BWF2 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
TRAIPQ9BWF2 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC6.6□□□□□ -1.35
TRAIPQ9BWF2 AC011460.1-201ENST00000636268 1834 ntBASIC6.6□□□□□ -1.35
TRAIPQ9BWF2 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
TRAIPQ9BWF2 AC005832.2-201ENST00000538921 1430 ntBASIC6.59□□□□□ -1.35
TRAIPQ9BWF2 AC093536.2-201ENST00000565257 1406 ntBASIC6.59□□□□□ -1.35
TRAIPQ9BWF2 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
TRAIPQ9BWF2 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC6.59□□□□□ -1.35
TRAIPQ9BWF2 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
TRAIPQ9BWF2 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
TRAIPQ9BWF2 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
TRAIPQ9BWF2 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
TRAIPQ9BWF2 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.59□□□□□ -1.35
TRAIPQ9BWF2 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.59□□□□□ -1.35
TRAIPQ9BWF2 U8.3-201ENST00000363321 132 ntBASIC6.59□□□□□ -1.35
TRAIPQ9BWF2 RNU1-59P-201ENST00000364829 162 ntBASIC6.59□□□□□ -1.35
TRAIPQ9BWF2 RN7SKP69-201ENST00000365390 305 ntBASIC6.59□□□□□ -1.35
TRAIPQ9BWF2 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
TRAIPQ9BWF2 AC019155.1-201ENST00000382242 574 ntBASIC6.59□□□□□ -1.35
TRAIPQ9BWF2 RNU6-356P-201ENST00000384140 107 ntBASIC6.59□□□□□ -1.35
TRAIPQ9BWF2 U3.29-201ENST00000391296 212 ntBASIC6.59□□□□□ -1.35
TRAIPQ9BWF2 OR7E101P-201ENST00000400428 513 ntBASIC6.59□□□□□ -1.35
TRAIPQ9BWF2 RPS3AP2-201ENST00000407190 754 ntBASIC6.59□□□□□ -1.35
TRAIPQ9BWF2 AC127391.1-201ENST00000411737 98 ntBASIC6.59□□□□□ -1.35
TRAIPQ9BWF2 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.59□□□□□ -1.35
TRAIPQ9BWF2 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.59□□□□□ -1.35
TRAIPQ9BWF2 DPPA2P1-201ENST00000428060 556 ntBASIC6.59□□□□□ -1.35
TRAIPQ9BWF2 AC119618.1-201ENST00000434191 222 ntBASIC6.59□□□□□ -1.35
TRAIPQ9BWF2 ELOCP18-201ENST00000434209 337 ntBASIC6.59□□□□□ -1.35
TRAIPQ9BWF2 AL450263.2-201ENST00000439400 589 ntBASIC6.59□□□□□ -1.35
TRAIPQ9BWF2 AL391987.1-201ENST00000441025 200 ntBASIC6.59□□□□□ -1.35
TRAIPQ9BWF2 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC6.59□□□□□ -1.35
TRAIPQ9BWF2 AC079922.1-201ENST00000443291 359 ntBASIC6.59□□□□□ -1.35
TRAIPQ9BWF2 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.59□□□□□ -1.35
TRAIPQ9BWF2 AL445665.1-202ENST00000452436 324 ntBASIC6.59□□□□□ -1.35
TRAIPQ9BWF2 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC6.59□□□□□ -1.35
TRAIPQ9BWF2 AL035090.1-201ENST00000454835 332 ntBASIC6.59□□□□□ -1.35
TRAIPQ9BWF2 AC053481.1-201ENST00000467217 306 ntBASIC6.59□□□□□ -1.35
TRAIPQ9BWF2 RN7SL591P-201ENST00000496150 292 ntBASIC6.59□□□□□ -1.35
TRAIPQ9BWF2 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC6.59□□□□□ -1.35
TRAIPQ9BWF2 AC109927.2-201ENST00000506416 303 ntBASIC6.59□□□□□ -1.35
TRAIPQ9BWF2 AC091133.4-201ENST00000511142 308 ntBASIC6.59□□□□□ -1.35
TRAIPQ9BWF2 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC6.59□□□□□ -1.35
TRAIPQ9BWF2 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms