Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.26
CCDC85AQ96PX6 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
CCDC85AQ96PX6 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
CCDC85AQ96PX6 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
CCDC85AQ96PX6 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC7.2□□□□□ -1.26
CCDC85AQ96PX6 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC7.2□□□□□ -1.26
CCDC85AQ96PX6 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC7.2□□□□□ -1.26
CCDC85AQ96PX6 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
CCDC85AQ96PX6 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CCDC85AQ96PX6 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CCDC85AQ96PX6 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CCDC85AQ96PX6 AL355377.1-201ENST00000621125 1653 ntBASIC7.2□□□□□ -1.26
CCDC85AQ96PX6 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CCDC85AQ96PX6 AL356432.1-201ENST00000405809 419 ntBASIC7.2□□□□□ -1.26
CCDC85AQ96PX6 MAST4-207ENST00000407621 559 ntTSL 2 BASIC7.2□□□□□ -1.26
CCDC85AQ96PX6 RNU2-8P-201ENST00000410727 190 ntBASIC7.2□□□□□ -1.26
CCDC85AQ96PX6 RPL35AP24-201ENST00000413846 330 ntBASIC7.2□□□□□ -1.26
CCDC85AQ96PX6 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC7.2□□□□□ -1.26
CCDC85AQ96PX6 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC7.2□□□□□ -1.26
CCDC85AQ96PX6 AL365400.1-201ENST00000431854 640 ntBASIC7.2□□□□□ -1.26
CCDC85AQ96PX6 MTCO1P27-201ENST00000448269 226 ntBASIC7.2□□□□□ -1.26
CCDC85AQ96PX6 SIAH1P1-201ENST00000479411 923 ntBASIC7.2□□□□□ -1.26
CCDC85AQ96PX6 PPP1R11P1-201ENST00000486095 376 ntBASIC7.2□□□□□ -1.26
CCDC85AQ96PX6 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CCDC85AQ96PX6 AC011611.1-201ENST00000552179 197 ntBASIC7.2□□□□□ -1.26
CCDC85AQ96PX6 AC051619.2-201ENST00000559063 397 ntBASIC7.2□□□□□ -1.26
CCDC85AQ96PX6 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC7.2□□□□□ -1.26
CCDC85AQ96PX6 AL157394.1-201ENST00000562983 1224 ntBASIC7.2□□□□□ -1.26
CCDC85AQ96PX6 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC7.2□□□□□ -1.26
CCDC85AQ96PX6 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC7.2□□□□□ -1.26
CCDC85AQ96PX6 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC7.2□□□□□ -1.26
CCDC85AQ96PX6 MIR1273E-201ENST00000581165 102 ntBASIC7.2□□□□□ -1.26
CCDC85AQ96PX6 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC7.2□□□□□ -1.26
CCDC85AQ96PX6 AC007687.1-201ENST00000602704 304 ntBASIC7.2□□□□□ -1.26
CCDC85AQ96PX6 AC013244.1-201ENST00000604279 193 ntBASIC7.2□□□□□ -1.26
CCDC85AQ96PX6 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC7.2□□□□□ -1.26
CCDC85AQ96PX6 AL161734.1-201ENST00000609720 557 ntBASIC7.2□□□□□ -1.26
CCDC85AQ96PX6 AC090527.3-201ENST00000619041 548 ntBASIC7.2□□□□□ -1.26
CCDC85AQ96PX6 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC7.2□□□□□ -1.26
CCDC85AQ96PX6 MIR6719-201ENST00000622428 87 ntBASIC7.2□□□□□ -1.26
CCDC85AQ96PX6 CU639417.4-201ENST00000623928 207 ntBASIC7.2□□□□□ -1.26
CCDC85AQ96PX6 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CCDC85AQ96PX6 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC7.2□□□□□ -1.26
CCDC85AQ96PX6 DMD-222ENST00000474231 5209 ntTSL 5 BASIC7.2□□□□□ -1.26
CCDC85AQ96PX6 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CCDC85AQ96PX6 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CCDC85AQ96PX6 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CCDC85AQ96PX6 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
CCDC85AQ96PX6 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CCDC85AQ96PX6 LINC02019-201ENST00000608605 2060 ntBASIC7.2□□□□□ -1.26
CCDC85AQ96PX6 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CCDC85AQ96PX6 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC7.19□□□□□ -1.26
CCDC85AQ96PX6 ALB-219ENST00000621085 1418 ntTSL 5 BASIC7.19□□□□□ -1.26
CCDC85AQ96PX6 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC7.19□□□□□ -1.26
CCDC85AQ96PX6 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC7.19□□□□□ -1.26
CCDC85AQ96PX6 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CCDC85AQ96PX6 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC7.19□□□□□ -1.26
CCDC85AQ96PX6 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CCDC85AQ96PX6 SNRPEP3-201ENST00000338402 276 ntBASIC7.19□□□□□ -1.26
CCDC85AQ96PX6 RN7SKP162-201ENST00000363605 345 ntBASIC7.19□□□□□ -1.26
CCDC85AQ96PX6 RN7SKP124-201ENST00000364730 341 ntBASIC7.19□□□□□ -1.26
CCDC85AQ96PX6 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC7.19□□□□□ -1.26
CCDC85AQ96PX6 Z97832.1-201ENST00000402490 328 ntBASIC7.19□□□□□ -1.26
CCDC85AQ96PX6 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC7.19□□□□□ -1.26
CCDC85AQ96PX6 MTCO3P12-201ENST00000416718 547 ntBASIC7.19□□□□□ -1.26
CCDC85AQ96PX6 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC7.19□□□□□ -1.26
CCDC85AQ96PX6 REREP1Y-201ENST00000422655 198 ntBASIC7.19□□□□□ -1.26
CCDC85AQ96PX6 AC016027.5-201ENST00000427227 210 ntBASIC7.19□□□□□ -1.26
CCDC85AQ96PX6 RPL7P54-201ENST00000438336 674 ntBASIC7.19□□□□□ -1.26
CCDC85AQ96PX6 LSM1P1-201ENST00000438629 273 ntBASIC7.19□□□□□ -1.26
CCDC85AQ96PX6 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC7.19□□□□□ -1.26
CCDC85AQ96PX6 REREP2Y-201ENST00000439103 200 ntBASIC7.19□□□□□ -1.26
CCDC85AQ96PX6 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC7.19□□□□□ -1.26
CCDC85AQ96PX6 TRGVB-201ENST00000453257 471 ntBASIC7.19□□□□□ -1.26
CCDC85AQ96PX6 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC7.19□□□□□ -1.26
CCDC85AQ96PX6 AC004129.2-201ENST00000457229 287 ntBASIC7.19□□□□□ -1.26
CCDC85AQ96PX6 OARD1-211ENST00000480585 829 ntTSL 3 BASIC7.19□□□□□ -1.26
CCDC85AQ96PX6 AC096576.1-201ENST00000489014 359 ntBASIC7.19□□□□□ -1.26
CCDC85AQ96PX6 AC139783.2-201ENST00000504847 1145 ntBASIC7.19□□□□□ -1.26
CCDC85AQ96PX6 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CCDC85AQ96PX6 IGKV2-18-201ENST00000522607 343 ntBASIC7.19□□□□□ -1.26
CCDC85AQ96PX6 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC7.19□□□□□ -1.26
CCDC85AQ96PX6 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC7.19□□□□□ -1.26
CCDC85AQ96PX6 RGS5-219ENST00000528019 512 ntTSL 4 BASIC7.19□□□□□ -1.26
CCDC85AQ96PX6 AC243972.3-201ENST00000539655 198 ntBASIC7.19□□□□□ -1.26
CCDC85AQ96PX6 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC7.19□□□□□ -1.26
CCDC85AQ96PX6 AC096996.1-201ENST00000563813 325 ntBASIC7.19□□□□□ -1.26
CCDC85AQ96PX6 AC090751.1-201ENST00000566966 267 ntBASIC7.19□□□□□ -1.26
CCDC85AQ96PX6 AC034268.2-201ENST00000571784 482 ntBASIC7.19□□□□□ -1.26
CCDC85AQ96PX6 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC7.19□□□□□ -1.26
CCDC85AQ96PX6 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC7.19□□□□□ -1.26
CCDC85AQ96PX6 HMGN1P30-201ENST00000589286 268 ntBASIC7.19□□□□□ -1.26
CCDC85AQ96PX6 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC7.19□□□□□ -1.26
CCDC85AQ96PX6 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
CCDC85AQ96PX6 MTND5P42-201ENST00000637720 498 ntBASIC7.19□□□□□ -1.26
CCDC85AQ96PX6 AC003973.3-201ENST00000624863 2822 ntBASIC7.19□□□□□ -1.26
CCDC85AQ96PX6 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
CCDC85AQ96PX6 AC130304.1-201ENST00000622942 2385 ntBASIC7.19□□□□□ -1.26
CCDC85AQ96PX6 AC022164.1-201ENST00000568767 2673 ntBASIC7.19□□□□□ -1.26
CCDC85AQ96PX6 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms