Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC5.4□□□□□ -1.54
CDK5RAP3Q96JB5 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.4□□□□□ -1.54
CDK5RAP3Q96JB5 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC5.4□□□□□ -1.54
CDK5RAP3Q96JB5 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CDK5RAP3Q96JB5 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC5.4□□□□□ -1.54
CDK5RAP3Q96JB5 AC004217.3-201ENST00000551552 878 ntBASIC5.4□□□□□ -1.54
CDK5RAP3Q96JB5 HIGD1AP17-201ENST00000554576 276 ntBASIC5.4□□□□□ -1.54
CDK5RAP3Q96JB5 AC109446.2-201ENST00000567872 497 ntBASIC5.4□□□□□ -1.54
CDK5RAP3Q96JB5 MIR3936-201ENST00000584304 110 ntBASIC5.4□□□□□ -1.54
CDK5RAP3Q96JB5 AC069304.3-201ENST00000603938 1084 ntBASIC5.4□□□□□ -1.54
CDK5RAP3Q96JB5 FAM27B-201ENST00000610601 213 ntBASIC5.4□□□□□ -1.54
CDK5RAP3Q96JB5 AC023158.2-201ENST00000614876 543 ntBASIC5.4□□□□□ -1.54
CDK5RAP3Q96JB5 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CDK5RAP3Q96JB5 AL603755.1-201ENST00000619504 163 ntBASIC5.4□□□□□ -1.54
CDK5RAP3Q96JB5 MIR4278-201ENST00000636094 69 ntBASIC5.4□□□□□ -1.54
CDK5RAP3Q96JB5 AC103706.2-201ENST00000638080 240 ntBASIC5.4□□□□□ -1.54
CDK5RAP3Q96JB5 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC5.4□□□□□ -1.55
CDK5RAP3Q96JB5 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.4□□□□□ -1.55
CDK5RAP3Q96JB5 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.4□□□□□ -1.55
CDK5RAP3Q96JB5 MAPK10-304ENST00000641341 3984 ntBASIC5.4□□□□□ -1.55
CDK5RAP3Q96JB5 AP000776.1-201ENST00000530032 1663 ntBASIC5.4□□□□□ -1.55
CDK5RAP3Q96JB5 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
CDK5RAP3Q96JB5 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
CDK5RAP3Q96JB5 AC131971.1-201ENST00000332881 1482 ntBASIC5.39□□□□□ -1.55
CDK5RAP3Q96JB5 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CDK5RAP3Q96JB5 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CDK5RAP3Q96JB5 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CDK5RAP3Q96JB5 AC091046.3-201ENST00000631455 1574 ntBASIC5.39□□□□□ -1.55
CDK5RAP3Q96JB5 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CDK5RAP3Q96JB5 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CDK5RAP3Q96JB5 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CDK5RAP3Q96JB5 RNU6-839P-201ENST00000363347 108 ntBASIC5.39□□□□□ -1.55
CDK5RAP3Q96JB5 RSL24D1P4-201ENST00000400938 484 ntBASIC5.39□□□□□ -1.55
CDK5RAP3Q96JB5 TMSB4XP8-201ENST00000402089 135 ntBASIC5.39□□□□□ -1.55
CDK5RAP3Q96JB5 U3.35-201ENST00000408405 208 ntBASIC5.39□□□□□ -1.55
CDK5RAP3Q96JB5 RNA5SP80-201ENST00000410475 111 ntBASIC5.39□□□□□ -1.55
CDK5RAP3Q96JB5 RNU4-72P-201ENST00000410754 173 ntBASIC5.39□□□□□ -1.55
CDK5RAP3Q96JB5 RNU6-272P-201ENST00000411028 104 ntBASIC5.39□□□□□ -1.55
CDK5RAP3Q96JB5 TMSB4XP6-201ENST00000415187 135 ntBASIC5.39□□□□□ -1.55
CDK5RAP3Q96JB5 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.39□□□□□ -1.55
CDK5RAP3Q96JB5 USP9YP26-201ENST00000421008 661 ntBASIC5.39□□□□□ -1.55
CDK5RAP3Q96JB5 AC090960.1-201ENST00000421072 306 ntBASIC5.39□□□□□ -1.55
CDK5RAP3Q96JB5 TMSB4XP1-201ENST00000424567 135 ntBASIC5.39□□□□□ -1.55
CDK5RAP3Q96JB5 RPL7P44-201ENST00000424827 742 ntBASIC5.39□□□□□ -1.55
CDK5RAP3Q96JB5 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.39□□□□□ -1.55
CDK5RAP3Q96JB5 BLOC1S2P1-201ENST00000428431 301 ntBASIC5.39□□□□□ -1.55
CDK5RAP3Q96JB5 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC5.39□□□□□ -1.55
CDK5RAP3Q96JB5 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC5.39□□□□□ -1.55
CDK5RAP3Q96JB5 MTND5P2-201ENST00000442927 1142 ntBASIC5.39□□□□□ -1.55
CDK5RAP3Q96JB5 OR1H1P-201ENST00000448731 937 ntBASIC5.39□□□□□ -1.55
CDK5RAP3Q96JB5 AURKAPS2-201ENST00000454983 333 ntBASIC5.39□□□□□ -1.55
CDK5RAP3Q96JB5 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.39□□□□□ -1.55
CDK5RAP3Q96JB5 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.39□□□□□ -1.55
CDK5RAP3Q96JB5 AC021146.8-201ENST00000507455 733 ntBASIC5.39□□□□□ -1.55
CDK5RAP3Q96JB5 AC048346.1-201ENST00000510247 144 ntBASIC5.39□□□□□ -1.55
CDK5RAP3Q96JB5 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC5.39□□□□□ -1.55
CDK5RAP3Q96JB5 PTK2-220ENST00000520151 573 ntTSL 4 BASIC5.39□□□□□ -1.55
CDK5RAP3Q96JB5 RGS4-207ENST00000527809 817 ntTSL 4 BASIC5.39□□□□□ -1.55
CDK5RAP3Q96JB5 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.39□□□□□ -1.55
CDK5RAP3Q96JB5 ELOCP32-201ENST00000548625 324 ntBASIC5.39□□□□□ -1.55
CDK5RAP3Q96JB5 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.39□□□□□ -1.55
CDK5RAP3Q96JB5 HMGB3P26-201ENST00000560051 582 ntBASIC5.39□□□□□ -1.55
CDK5RAP3Q96JB5 AC079171.1-201ENST00000568788 914 ntBASIC5.39□□□□□ -1.55
CDK5RAP3Q96JB5 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC5.39□□□□□ -1.55
CDK5RAP3Q96JB5 AC022726.1-201ENST00000587475 207 ntBASIC5.39□□□□□ -1.55
CDK5RAP3Q96JB5 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CDK5RAP3Q96JB5 AC004943.3-201ENST00000624116 600 ntBASIC5.39□□□□□ -1.55
CDK5RAP3Q96JB5 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC5.39□□□□□ -1.55
CDK5RAP3Q96JB5 AC068620.4-201ENST00000636730 1182 ntBASIC5.39□□□□□ -1.55
CDK5RAP3Q96JB5 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC5.39□□□□□ -1.55
CDK5RAP3Q96JB5 AC134882.1-201ENST00000603738 1676 ntBASIC5.39□□□□□ -1.55
CDK5RAP3Q96JB5 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
CDK5RAP3Q96JB5 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CDK5RAP3Q96JB5 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CDK5RAP3Q96JB5 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.39□□□□□ -1.55
CDK5RAP3Q96JB5 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.39□□□□□ -1.55
CDK5RAP3Q96JB5 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.39□□□□□ -1.55
CDK5RAP3Q96JB5 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.39□□□□□ -1.55
CDK5RAP3Q96JB5 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
CDK5RAP3Q96JB5 NCLP2-201ENST00000416078 1462 ntBASIC5.39□□□□□ -1.55
CDK5RAP3Q96JB5 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.38□□□□□ -1.55
CDK5RAP3Q96JB5 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
CDK5RAP3Q96JB5 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CDK5RAP3Q96JB5 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CDK5RAP3Q96JB5 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CDK5RAP3Q96JB5 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.38□□□□□ -1.55
CDK5RAP3Q96JB5 AC008549.2-201ENST00000333482 706 ntBASIC5.38□□□□□ -1.55
CDK5RAP3Q96JB5 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CDK5RAP3Q96JB5 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC5.38□□□□□ -1.55
CDK5RAP3Q96JB5 MIR217-201ENST00000384817 110 ntBASIC5.38□□□□□ -1.55
CDK5RAP3Q96JB5 U3.30-201ENST00000391308 210 ntBASIC5.38□□□□□ -1.55
CDK5RAP3Q96JB5 AC005522.1-201ENST00000395416 346 ntBASIC5.38□□□□□ -1.55
CDK5RAP3Q96JB5 ATP5F1P3-201ENST00000397213 657 ntBASIC5.38□□□□□ -1.55
CDK5RAP3Q96JB5 AL161909.1-201ENST00000397390 712 ntBASIC5.38□□□□□ -1.55
CDK5RAP3Q96JB5 SKINT1L-201ENST00000401057 817 ntBASIC5.38□□□□□ -1.55
CDK5RAP3Q96JB5 AL450992.3-201ENST00000413192 568 ntBASIC5.38□□□□□ -1.55
CDK5RAP3Q96JB5 AL161449.1-201ENST00000414531 1199 ntBASIC5.38□□□□□ -1.55
CDK5RAP3Q96JB5 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC5.38□□□□□ -1.55
CDK5RAP3Q96JB5 AC234781.2-201ENST00000426370 994 ntBASIC5.38□□□□□ -1.55
CDK5RAP3Q96JB5 Z93242.1-201ENST00000427102 353 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms