Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 TMEM248P1-201ENST00000510579 951 ntBASIC4.33□□□□□ -1.72
VPS33AQ96AX1 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.33□□□□□ -1.72
VPS33AQ96AX1 AC021006.3-201ENST00000530771 192 ntBASIC4.33□□□□□ -1.72
VPS33AQ96AX1 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.33□□□□□ -1.72
VPS33AQ96AX1 AC087897.1-201ENST00000550134 156 ntBASIC4.33□□□□□ -1.72
VPS33AQ96AX1 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.33□□□□□ -1.72
VPS33AQ96AX1 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC4.33□□□□□ -1.72
VPS33AQ96AX1 OR1AB1P-201ENST00000585564 761 ntBASIC4.33□□□□□ -1.72
VPS33AQ96AX1 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
VPS33AQ96AX1 AC011487.3-201ENST00000593607 453 ntBASIC4.33□□□□□ -1.72
VPS33AQ96AX1 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.33□□□□□ -1.72
VPS33AQ96AX1 AL512624.1-201ENST00000613638 469 ntBASIC4.33□□□□□ -1.72
VPS33AQ96AX1 AL138721.1-201ENST00000616756 179 ntBASIC4.33□□□□□ -1.72
VPS33AQ96AX1 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC4.33□□□□□ -1.72
VPS33AQ96AX1 MIR6886-201ENST00000619864 61 ntBASIC4.33□□□□□ -1.72
VPS33AQ96AX1 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.33□□□□□ -1.72
VPS33AQ96AX1 AC006065.5-201ENST00000623427 349 ntBASIC4.33□□□□□ -1.72
VPS33AQ96AX1 UOX-205ENST00000640983 544 ntTSL 4 BASIC4.33□□□□□ -1.72
VPS33AQ96AX1 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
VPS33AQ96AX1 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.33□□□□□ -1.72
VPS33AQ96AX1 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
VPS33AQ96AX1 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
VPS33AQ96AX1 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.33□□□□□ -1.72
VPS33AQ96AX1 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.33□□□□□ -1.72
VPS33AQ96AX1 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.33□□□□□ -1.72
VPS33AQ96AX1 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.33□□□□□ -1.72
VPS33AQ96AX1 AC139769.1-204ENST00000472297 1931 ntBASIC4.33□□□□□ -1.72
VPS33AQ96AX1 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.32□□□□□ -1.72
VPS33AQ96AX1 CASC19-261ENST00000641853 1638 ntBASIC4.32□□□□□ -1.72
VPS33AQ96AX1 KARSP3-201ENST00000571212 1504 ntBASIC4.32□□□□□ -1.72
VPS33AQ96AX1 INTS6P1-201ENST00000504674 2530 ntBASIC4.32□□□□□ -1.72
VPS33AQ96AX1 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.32□□□□□ -1.72
VPS33AQ96AX1 DCAF13P1-201ENST00000495256 1330 ntBASIC4.32□□□□□ -1.72
VPS33AQ96AX1 RHOT1P2-201ENST00000366423 333 ntBASIC4.32□□□□□ -1.72
VPS33AQ96AX1 AL121978.1-201ENST00000402778 359 ntBASIC4.32□□□□□ -1.72
VPS33AQ96AX1 VN1R8P-201ENST00000407739 893 ntBASIC4.32□□□□□ -1.72
VPS33AQ96AX1 RN7SKP267-201ENST00000410381 285 ntBASIC4.32□□□□□ -1.72
VPS33AQ96AX1 RNU6-575P-201ENST00000411326 105 ntBASIC4.32□□□□□ -1.72
VPS33AQ96AX1 AC069218.2-201ENST00000411665 344 ntBASIC4.32□□□□□ -1.72
VPS33AQ96AX1 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC4.32□□□□□ -1.72
VPS33AQ96AX1 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC4.32□□□□□ -1.72
VPS33AQ96AX1 AC009237.2-201ENST00000421358 284 ntBASIC4.32□□□□□ -1.72
VPS33AQ96AX1 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.32□□□□□ -1.72
VPS33AQ96AX1 RPP40P1-201ENST00000426762 456 ntBASIC4.32□□□□□ -1.72
VPS33AQ96AX1 AC007559.1-201ENST00000428736 355 ntBASIC4.32□□□□□ -1.72
VPS33AQ96AX1 OR51AB1P-201ENST00000429046 620 ntBASIC4.32□□□□□ -1.72
VPS33AQ96AX1 NRBF2P3-201ENST00000432731 865 ntBASIC4.32□□□□□ -1.72
VPS33AQ96AX1 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC4.32□□□□□ -1.72
VPS33AQ96AX1 PTGES3P1-201ENST00000439531 483 ntBASIC4.32□□□□□ -1.72
VPS33AQ96AX1 AL353748.1-201ENST00000440753 474 ntBASIC4.32□□□□□ -1.72
VPS33AQ96AX1 RNF2P1-201ENST00000442955 1010 ntBASIC4.32□□□□□ -1.72
VPS33AQ96AX1 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.32□□□□□ -1.72
VPS33AQ96AX1 EIF2S2P2-201ENST00000447161 982 ntBASIC4.32□□□□□ -1.72
VPS33AQ96AX1 TPT1P13-201ENST00000449760 499 ntBASIC4.32□□□□□ -1.72
VPS33AQ96AX1 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC4.32□□□□□ -1.72
VPS33AQ96AX1 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.32□□□□□ -1.72
VPS33AQ96AX1 MTND2P39-201ENST00000457230 764 ntBASIC4.32□□□□□ -1.72
VPS33AQ96AX1 NF1P3-201ENST00000457709 450 ntBASIC4.32□□□□□ -1.72
VPS33AQ96AX1 AC104763.1-201ENST00000475274 360 ntBASIC4.32□□□□□ -1.72
VPS33AQ96AX1 RN7SL808P-201ENST00000496066 299 ntBASIC4.32□□□□□ -1.72
VPS33AQ96AX1 RNF138P1-201ENST00000502765 546 ntBASIC4.32□□□□□ -1.72
VPS33AQ96AX1 MTND3P3-201ENST00000505004 126 ntBASIC4.32□□□□□ -1.72
VPS33AQ96AX1 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.32□□□□□ -1.72
VPS33AQ96AX1 AC048346.1-201ENST00000510247 144 ntBASIC4.32□□□□□ -1.72
VPS33AQ96AX1 PTGES3P3-201ENST00000511479 482 ntBASIC4.32□□□□□ -1.72
VPS33AQ96AX1 AC093755.1-201ENST00000512950 1023 ntBASIC4.32□□□□□ -1.72
VPS33AQ96AX1 AC015795.1-201ENST00000513669 327 ntBASIC4.32□□□□□ -1.72
VPS33AQ96AX1 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.32□□□□□ -1.72
VPS33AQ96AX1 RNA5SP135-201ENST00000517019 125 ntBASIC4.32□□□□□ -1.72
VPS33AQ96AX1 snoZ278.1-201ENST00000517059 112 ntBASIC4.32□□□□□ -1.72
VPS33AQ96AX1 IGHVIII-67-4-201ENST00000524281 296 ntBASIC4.32□□□□□ -1.72
VPS33AQ96AX1 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.32□□□□□ -1.72
VPS33AQ96AX1 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC4.32□□□□□ -1.72
VPS33AQ96AX1 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.32□□□□□ -1.72
VPS33AQ96AX1 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.32□□□□□ -1.72
VPS33AQ96AX1 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.32□□□□□ -1.72
VPS33AQ96AX1 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.32□□□□□ -1.72
VPS33AQ96AX1 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC4.32□□□□□ -1.72
VPS33AQ96AX1 AC074051.3-201ENST00000570238 358 ntBASIC4.32□□□□□ -1.72
VPS33AQ96AX1 AC007566.2-201ENST00000603642 413 ntBASIC4.32□□□□□ -1.72
VPS33AQ96AX1 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.32□□□□□ -1.72
VPS33AQ96AX1 AP000238.1-201ENST00000608759 426 ntBASIC4.32□□□□□ -1.72
VPS33AQ96AX1 AC078899.5-201ENST00000612475 178 ntBASIC4.32□□□□□ -1.72
VPS33AQ96AX1 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.32□□□□□ -1.72
VPS33AQ96AX1 MIR6826-201ENST00000617808 98 ntBASIC4.32□□□□□ -1.72
VPS33AQ96AX1 AC087385.3-201ENST00000620477 187 ntBASIC4.32□□□□□ -1.72
VPS33AQ96AX1 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4.32□□□□□ -1.72
VPS33AQ96AX1 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
VPS33AQ96AX1 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.32□□□□□ -1.72
VPS33AQ96AX1 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
VPS33AQ96AX1 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
VPS33AQ96AX1 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.31□□□□□ -1.72
VPS33AQ96AX1 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
VPS33AQ96AX1 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
VPS33AQ96AX1 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
VPS33AQ96AX1 ANKRD36P1-201ENST00000344424 659 ntBASIC4.31□□□□□ -1.72
VPS33AQ96AX1 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
VPS33AQ96AX1 Z98745.1-201ENST00000402553 494 ntBASIC4.31□□□□□ -1.72
VPS33AQ96AX1 RPS7P9-201ENST00000414704 586 ntBASIC4.31□□□□□ -1.72
VPS33AQ96AX1 RAC1P3-201ENST00000416129 580 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms