Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC4.81□□□□□ -1.64
HMGB4Q8WW32 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC4.81□□□□□ -1.64
HMGB4Q8WW32 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.81□□□□□ -1.64
HMGB4Q8WW32 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.81□□□□□ -1.64
HMGB4Q8WW32 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
HMGB4Q8WW32 KRT19P6-201ENST00000510983 209 ntBASIC4.81□□□□□ -1.64
HMGB4Q8WW32 AC093840.1-201ENST00000511599 336 ntBASIC4.81□□□□□ -1.64
HMGB4Q8WW32 RPL7L1P13-201ENST00000511702 739 ntBASIC4.81□□□□□ -1.64
HMGB4Q8WW32 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC4.81□□□□□ -1.64
HMGB4Q8WW32 RN7SKP122-201ENST00000515923 296 ntBASIC4.81□□□□□ -1.64
HMGB4Q8WW32 RNU6-202P-201ENST00000515998 96 ntBASIC4.81□□□□□ -1.64
HMGB4Q8WW32 CA1-215ENST00000522389 551 ntTSL 3 BASIC4.81□□□□□ -1.64
HMGB4Q8WW32 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.81□□□□□ -1.64
HMGB4Q8WW32 AC027369.5-201ENST00000533838 755 ntBASIC4.81□□□□□ -1.64
HMGB4Q8WW32 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
HMGB4Q8WW32 DUXAP1-201ENST00000556632 463 ntBASIC4.81□□□□□ -1.64
HMGB4Q8WW32 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.81□□□□□ -1.64
HMGB4Q8WW32 GTF2IP8-201ENST00000560687 584 ntBASIC4.81□□□□□ -1.64
HMGB4Q8WW32 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.81□□□□□ -1.64
HMGB4Q8WW32 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.81□□□□□ -1.64
HMGB4Q8WW32 AC009852.2-201ENST00000567898 485 ntBASIC4.81□□□□□ -1.64
HMGB4Q8WW32 MIR5699-201ENST00000578903 90 ntBASIC4.81□□□□□ -1.64
HMGB4Q8WW32 BNIP3P24-201ENST00000593398 557 ntBASIC4.81□□□□□ -1.64
HMGB4Q8WW32 AC010487.1-201ENST00000594408 1172 ntBASIC4.81□□□□□ -1.64
HMGB4Q8WW32 AL390838.2-201ENST00000602394 274 ntBASIC4.81□□□□□ -1.64
HMGB4Q8WW32 AC018695.5-201ENST00000605872 315 ntBASIC4.81□□□□□ -1.64
HMGB4Q8WW32 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC4.81□□□□□ -1.64
HMGB4Q8WW32 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.81□□□□□ -1.64
HMGB4Q8WW32 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.81□□□□□ -1.64
HMGB4Q8WW32 AC007490.1-201ENST00000624321 703 ntBASIC4.81□□□□□ -1.64
HMGB4Q8WW32 OR52H1-202ENST00000641796 1061 ntBASIC4.81□□□□□ -1.64
HMGB4Q8WW32 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HMGB4Q8WW32 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HMGB4Q8WW32 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HMGB4Q8WW32 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
HMGB4Q8WW32 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
HMGB4Q8WW32 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.81□□□□□ -1.64
HMGB4Q8WW32 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HMGB4Q8WW32 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HMGB4Q8WW32 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HMGB4Q8WW32 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HMGB4Q8WW32 AP000776.1-201ENST00000530032 1663 ntBASIC4.8□□□□□ -1.64
HMGB4Q8WW32 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4.8□□□□□ -1.64
HMGB4Q8WW32 THAP12P5-201ENST00000405864 2275 ntBASIC4.8□□□□□ -1.64
HMGB4Q8WW32 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.8□□□□□ -1.64
HMGB4Q8WW32 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HMGB4Q8WW32 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HMGB4Q8WW32 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
HMGB4Q8WW32 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HMGB4Q8WW32 TLK1P1-201ENST00000456760 2440 ntBASIC4.8□□□□□ -1.64
HMGB4Q8WW32 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
HMGB4Q8WW32 RNU6-1066P-201ENST00000363573 105 ntBASIC4.8□□□□□ -1.64
HMGB4Q8WW32 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
HMGB4Q8WW32 Y_RNA.408-201ENST00000383987 102 ntBASIC4.8□□□□□ -1.64
HMGB4Q8WW32 RNA5SP397-201ENST00000391323 118 ntBASIC4.8□□□□□ -1.64
HMGB4Q8WW32 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.8□□□□□ -1.64
HMGB4Q8WW32 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC4.8□□□□□ -1.64
HMGB4Q8WW32 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC4.8□□□□□ -1.64
HMGB4Q8WW32 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.8□□□□□ -1.64
HMGB4Q8WW32 AC006960.1-201ENST00000419980 153 ntBASIC4.8□□□□□ -1.64
HMGB4Q8WW32 AC009237.2-201ENST00000421358 284 ntBASIC4.8□□□□□ -1.64
HMGB4Q8WW32 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC4.8□□□□□ -1.64
HMGB4Q8WW32 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.8□□□□□ -1.64
HMGB4Q8WW32 AL031736.2-201ENST00000426573 787 ntBASIC4.8□□□□□ -1.64
HMGB4Q8WW32 AL732292.1-201ENST00000426692 226 ntBASIC4.8□□□□□ -1.64
HMGB4Q8WW32 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.8□□□□□ -1.64
HMGB4Q8WW32 ATP5F1P1-201ENST00000433775 569 ntBASIC4.8□□□□□ -1.64
HMGB4Q8WW32 AL034418.1-201ENST00000448675 860 ntBASIC4.8□□□□□ -1.64
HMGB4Q8WW32 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HMGB4Q8WW32 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.8□□□□□ -1.64
HMGB4Q8WW32 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HMGB4Q8WW32 NIFKP7-201ENST00000503365 834 ntBASIC4.8□□□□□ -1.64
HMGB4Q8WW32 WBP1LP4-201ENST00000505043 344 ntBASIC4.8□□□□□ -1.64
HMGB4Q8WW32 AC104090.1-201ENST00000506341 1171 ntBASIC4.8□□□□□ -1.64
HMGB4Q8WW32 AC079395.1-201ENST00000510981 262 ntBASIC4.8□□□□□ -1.64
HMGB4Q8WW32 RN7SKP96-201ENST00000516948 297 ntBASIC4.8□□□□□ -1.64
HMGB4Q8WW32 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.8□□□□□ -1.64
HMGB4Q8WW32 MTND2P26-201ENST00000528255 1029 ntBASIC4.8□□□□□ -1.64
HMGB4Q8WW32 AP003461.1-201ENST00000528866 78 ntBASIC4.8□□□□□ -1.64
HMGB4Q8WW32 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.8□□□□□ -1.64
HMGB4Q8WW32 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.8□□□□□ -1.64
HMGB4Q8WW32 EMP1-206ENST00000537612 505 ntTSL 3 BASIC4.8□□□□□ -1.64
HMGB4Q8WW32 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.8□□□□□ -1.64
HMGB4Q8WW32 SERPINE4P-201ENST00000554978 281 ntBASIC4.8□□□□□ -1.64
HMGB4Q8WW32 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.8□□□□□ -1.64
HMGB4Q8WW32 AL132657.2-201ENST00000564417 358 ntBASIC4.8□□□□□ -1.64
HMGB4Q8WW32 MTCYBP13-201ENST00000578634 1093 ntBASIC4.8□□□□□ -1.64
HMGB4Q8WW32 AP005119.2-201ENST00000579735 1105 ntBASIC4.8□□□□□ -1.64
HMGB4Q8WW32 AC069061.3-201ENST00000582254 823 ntBASIC4.8□□□□□ -1.64
HMGB4Q8WW32 PRPF19P1-201ENST00000584766 898 ntBASIC4.8□□□□□ -1.64
HMGB4Q8WW32 AL020997.2-201ENST00000602607 184 ntBASIC4.8□□□□□ -1.64
HMGB4Q8WW32 AC073091.2-201ENST00000603205 907 ntBASIC4.8□□□□□ -1.64
HMGB4Q8WW32 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.8□□□□□ -1.64
HMGB4Q8WW32 AC131159.1-201ENST00000621854 213 ntBASIC4.8□□□□□ -1.64
HMGB4Q8WW32 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.8□□□□□ -1.64
HMGB4Q8WW32 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC4.8□□□□□ -1.64
HMGB4Q8WW32 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
HMGB4Q8WW32 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.8□□□□□ -1.64
HMGB4Q8WW32 AL592148.3-201ENST00000608771 2646 ntBASIC4.8□□□□□ -1.64
HMGB4Q8WW32 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms