Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
TRIM41Q8WV44 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC10□□□□□ -0.81
TRIM41Q8WV44 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC10□□□□□ -0.81
TRIM41Q8WV44 U8.3-201ENST00000363321 132 ntBASIC10□□□□□ -0.81
TRIM41Q8WV44 AC068538.1-201ENST00000376856 336 ntBASIC10□□□□□ -0.81
TRIM41Q8WV44 RNA5SP487-201ENST00000410186 122 ntBASIC10□□□□□ -0.81
TRIM41Q8WV44 RPL31P35-201ENST00000431058 377 ntBASIC10□□□□□ -0.81
TRIM41Q8WV44 RPL7L1P9-201ENST00000431298 745 ntBASIC10□□□□□ -0.81
TRIM41Q8WV44 OR7E116P-201ENST00000448529 957 ntBASIC10□□□□□ -0.81
TRIM41Q8WV44 AL162739.1-201ENST00000450606 307 ntBASIC10□□□□□ -0.81
TRIM41Q8WV44 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC10□□□□□ -0.81
TRIM41Q8WV44 RPL7AP28-201ENST00000464513 571 ntBASIC10□□□□□ -0.81
TRIM41Q8WV44 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC10□□□□□ -0.81
TRIM41Q8WV44 RPS18P6-201ENST00000476880 458 ntBASIC10□□□□□ -0.81
TRIM41Q8WV44 MTND1P3-201ENST00000484956 952 ntBASIC10□□□□□ -0.81
TRIM41Q8WV44 RPL17P2-201ENST00000491913 451 ntBASIC10□□□□□ -0.81
TRIM41Q8WV44 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC10□□□□□ -0.81
TRIM41Q8WV44 SCARNA13-201ENST00000516672 275 ntBASIC10□□□□□ -0.81
TRIM41Q8WV44 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC10□□□□□ -0.81
TRIM41Q8WV44 AP000790.1-201ENST00000528891 737 ntBASIC10□□□□□ -0.81
TRIM41Q8WV44 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
TRIM41Q8WV44 FAM174B-202ENST00000553393 495 ntTSL 2 BASIC10□□□□□ -0.81
TRIM41Q8WV44 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC10□□□□□ -0.81
TRIM41Q8WV44 AC093249.1-201ENST00000567049 203 ntBASIC10□□□□□ -0.81
TRIM41Q8WV44 NRBF2P1-201ENST00000587407 859 ntBASIC10□□□□□ -0.81
TRIM41Q8WV44 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC10□□□□□ -0.81
TRIM41Q8WV44 AL355974.3-201ENST00000617383 467 ntBASIC10□□□□□ -0.81
TRIM41Q8WV44 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC10□□□□□ -0.81
TRIM41Q8WV44 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC10□□□□□ -0.81
TRIM41Q8WV44 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
TRIM41Q8WV44 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC10□□□□□ -0.81
TRIM41Q8WV44 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
TRIM41Q8WV44 AC108467.2-201ENST00000617640 1597 ntBASIC10□□□□□ -0.81
TRIM41Q8WV44 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
TRIM41Q8WV44 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
TRIM41Q8WV44 MAPK6PS2-201ENST00000379571 2060 ntBASIC10□□□□□ -0.81
TRIM41Q8WV44 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
TRIM41Q8WV44 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC10□□□□□ -0.81
TRIM41Q8WV44 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
TRIM41Q8WV44 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC10□□□□□ -0.81
TRIM41Q8WV44 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
TRIM41Q8WV44 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
TRIM41Q8WV44 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC9.99□□□□□ -0.81
TRIM41Q8WV44 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC9.99□□□□□ -0.81
TRIM41Q8WV44 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
TRIM41Q8WV44 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC9.99□□□□□ -0.81
TRIM41Q8WV44 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC9.99□□□□□ -0.81
TRIM41Q8WV44 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
TRIM41Q8WV44 RNU6-451P-201ENST00000362921 107 ntBASIC9.99□□□□□ -0.81
TRIM41Q8WV44 TMBIM7P-201ENST00000418074 855 ntBASIC9.99□□□□□ -0.81
TRIM41Q8WV44 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC9.99□□□□□ -0.81
TRIM41Q8WV44 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC9.99□□□□□ -0.81
TRIM41Q8WV44 AC016027.5-201ENST00000427227 210 ntBASIC9.99□□□□□ -0.81
TRIM41Q8WV44 RPL21P110-201ENST00000433345 446 ntBASIC9.99□□□□□ -0.81
TRIM41Q8WV44 AC236972.2-201ENST00000434979 310 ntBASIC9.99□□□□□ -0.81
TRIM41Q8WV44 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC9.99□□□□□ -0.81
TRIM41Q8WV44 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC9.99□□□□□ -0.81
TRIM41Q8WV44 AC048346.1-201ENST00000510247 144 ntBASIC9.99□□□□□ -0.81
TRIM41Q8WV44 AC026402.1-201ENST00000513642 170 ntBASIC9.99□□□□□ -0.81
TRIM41Q8WV44 UBE2Q2P10-201ENST00000514854 900 ntBASIC9.99□□□□□ -0.81
TRIM41Q8WV44 RNU6ATAC24P-201ENST00000516811 135 ntBASIC9.99□□□□□ -0.81
TRIM41Q8WV44 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC9.99□□□□□ -0.81
TRIM41Q8WV44 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC9.99□□□□□ -0.81
TRIM41Q8WV44 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC9.99□□□□□ -0.81
TRIM41Q8WV44 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC9.99□□□□□ -0.81
TRIM41Q8WV44 uc_338.5-201ENST00000611839 155 ntBASIC9.99□□□□□ -0.81
TRIM41Q8WV44 7SK.10-201ENST00000621414 298 ntBASIC9.99□□□□□ -0.81
TRIM41Q8WV44 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC9.99□□□□□ -0.81
TRIM41Q8WV44 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC9.99□□□□□ -0.81
TRIM41Q8WV44 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC9.99□□□□□ -0.81
TRIM41Q8WV44 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
TRIM41Q8WV44 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
TRIM41Q8WV44 GTF2H2B-203ENST00000508065 1432 ntBASIC9.99□□□□□ -0.81
TRIM41Q8WV44 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC9.98□□□□□ -0.81
TRIM41Q8WV44 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
TRIM41Q8WV44 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
TRIM41Q8WV44 AC009779.8-201ENST00000641684 4384 ntBASIC9.98□□□□□ -0.81
TRIM41Q8WV44 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC9.98□□□□□ -0.81
TRIM41Q8WV44 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
TRIM41Q8WV44 RNU6-574P-201ENST00000384265 107 ntBASIC9.98□□□□□ -0.81
TRIM41Q8WV44 MT-TR-201ENST00000387439 65 ntBASIC9.98□□□□□ -0.81
TRIM41Q8WV44 TMSB4XP8-201ENST00000402089 135 ntBASIC9.98□□□□□ -0.81
TRIM41Q8WV44 TMSB4XP6-201ENST00000415187 135 ntBASIC9.98□□□□□ -0.81
TRIM41Q8WV44 RPS7P15-201ENST00000415804 584 ntBASIC9.98□□□□□ -0.81
TRIM41Q8WV44 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC9.98□□□□□ -0.81
TRIM41Q8WV44 MTCO2P5-201ENST00000422621 426 ntBASIC9.98□□□□□ -0.81
TRIM41Q8WV44 TMSB4XP1-201ENST00000424567 135 ntBASIC9.98□□□□□ -0.81
TRIM41Q8WV44 SEPT14P3-201ENST00000439401 183 ntBASIC9.98□□□□□ -0.81
TRIM41Q8WV44 AL732372.2-207ENST00000445840 183 ntBASIC9.98□□□□□ -0.81
TRIM41Q8WV44 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC9.98□□□□□ -0.81
TRIM41Q8WV44 SEPT14P2-201ENST00000453405 183 ntBASIC9.98□□□□□ -0.81
TRIM41Q8WV44 RPL18AP17-201ENST00000455326 198 ntBASIC9.98□□□□□ -0.81
TRIM41Q8WV44 Y_RNA.632-201ENST00000459189 102 ntBASIC9.98□□□□□ -0.81
TRIM41Q8WV44 AC100832.1-201ENST00000471945 383 ntBASIC9.98□□□□□ -0.81
TRIM41Q8WV44 AC111193.1-201ENST00000504097 155 ntBASIC9.98□□□□□ -0.81
TRIM41Q8WV44 AC139783.2-201ENST00000504847 1145 ntBASIC9.98□□□□□ -0.81
TRIM41Q8WV44 SEPT14P4-201ENST00000513445 186 ntBASIC9.98□□□□□ -0.81
TRIM41Q8WV44 IGKV2-23-201ENST00000518729 323 ntBASIC9.98□□□□□ -0.81
TRIM41Q8WV44 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC9.98□□□□□ -0.81
TRIM41Q8WV44 IGKV2D-10-201ENST00000520194 281 ntBASIC9.98□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms