Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
SNED1Q8TER0 AC019072.1-201ENST00000604535 1551 ntBASIC4.72□□□□□ -1.65
SNED1Q8TER0 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SNED1Q8TER0 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
SNED1Q8TER0 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SNED1Q8TER0 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.72□□□□□ -1.65
SNED1Q8TER0 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
SNED1Q8TER0 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
SNED1Q8TER0 AC010300.1-201ENST00000600671 5134 ntBASIC4.72□□□□□ -1.65
SNED1Q8TER0 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SNED1Q8TER0 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
SNED1Q8TER0 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SNED1Q8TER0 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SNED1Q8TER0 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.72□□□□□ -1.65
SNED1Q8TER0 DHFRP5-201ENST00000406944 564 ntBASIC4.72□□□□□ -1.65
SNED1Q8TER0 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4.72□□□□□ -1.65
SNED1Q8TER0 HIGD1AP4-201ENST00000430194 280 ntBASIC4.72□□□□□ -1.65
SNED1Q8TER0 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SNED1Q8TER0 ZFAND6P1-201ENST00000434138 605 ntBASIC4.72□□□□□ -1.65
SNED1Q8TER0 HLA-N-201ENST00000437516 135 ntBASIC4.72□□□□□ -1.65
SNED1Q8TER0 RPL21P23-201ENST00000446654 460 ntBASIC4.72□□□□□ -1.65
SNED1Q8TER0 AL606517.1-201ENST00000446914 387 ntBASIC4.72□□□□□ -1.65
SNED1Q8TER0 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.72□□□□□ -1.65
SNED1Q8TER0 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC4.72□□□□□ -1.65
SNED1Q8TER0 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.72□□□□□ -1.65
SNED1Q8TER0 AC068587.2-201ENST00000478386 781 ntBASIC4.72□□□□□ -1.65
SNED1Q8TER0 HSPD1P11-201ENST00000508643 1702 ntBASIC4.72□□□□□ -1.65
SNED1Q8TER0 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.72□□□□□ -1.65
SNED1Q8TER0 RN7SKP13-201ENST00000515933 244 ntBASIC4.72□□□□□ -1.65
SNED1Q8TER0 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.72□□□□□ -1.65
SNED1Q8TER0 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.72□□□□□ -1.65
SNED1Q8TER0 ELOCP35-201ENST00000604289 336 ntBASIC4.72□□□□□ -1.65
SNED1Q8TER0 GMCL1P2-201ENST00000605230 823 ntBASIC4.72□□□□□ -1.65
SNED1Q8TER0 AC097065.2-201ENST00000608159 533 ntBASIC4.72□□□□□ -1.65
SNED1Q8TER0 AL121890.2-201ENST00000617644 465 ntBASIC4.72□□□□□ -1.65
SNED1Q8TER0 AC079684.1-201ENST00000621405 437 ntBASIC4.72□□□□□ -1.65
SNED1Q8TER0 AL049777.1-201ENST00000622740 518 ntBASIC4.72□□□□□ -1.65
SNED1Q8TER0 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.72□□□□□ -1.65
SNED1Q8TER0 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.72□□□□□ -1.65
SNED1Q8TER0 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.65
SNED1Q8TER0 AL512283.1-201ENST00000606756 1384 ntBASIC4.71□□□□□ -1.66
SNED1Q8TER0 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.71□□□□□ -1.66
SNED1Q8TER0 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC4.71□□□□□ -1.66
SNED1Q8TER0 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SNED1Q8TER0 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC4.71□□□□□ -1.66
SNED1Q8TER0 OR51C1P-202ENST00000641159 1444 ntBASIC4.71□□□□□ -1.66
SNED1Q8TER0 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
SNED1Q8TER0 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SNED1Q8TER0 AC104297.1-201ENST00000393779 870 ntBASIC4.71□□□□□ -1.66
SNED1Q8TER0 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC4.71□□□□□ -1.66
SNED1Q8TER0 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.71□□□□□ -1.66
SNED1Q8TER0 RPS7P15-201ENST00000415804 584 ntBASIC4.71□□□□□ -1.66
SNED1Q8TER0 CYCSP10-201ENST00000417973 294 ntBASIC4.71□□□□□ -1.66
SNED1Q8TER0 MTND4LP7-201ENST00000431728 294 ntBASIC4.71□□□□□ -1.66
SNED1Q8TER0 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.71□□□□□ -1.66
SNED1Q8TER0 AC074367.1-201ENST00000438685 1125 ntBASIC4.71□□□□□ -1.66
SNED1Q8TER0 AC073387.1-201ENST00000453261 709 ntBASIC4.71□□□□□ -1.66
SNED1Q8TER0 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.71□□□□□ -1.66
SNED1Q8TER0 RN7SL271P-201ENST00000487601 295 ntBASIC4.71□□□□□ -1.66
SNED1Q8TER0 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.71□□□□□ -1.66
SNED1Q8TER0 UBE2V1P12-201ENST00000503954 474 ntBASIC4.71□□□□□ -1.66
SNED1Q8TER0 AC016550.1-201ENST00000505348 785 ntBASIC4.71□□□□□ -1.66
SNED1Q8TER0 RN7SKP18-201ENST00000516005 275 ntBASIC4.71□□□□□ -1.66
SNED1Q8TER0 OR8I1P-201ENST00000529291 931 ntBASIC4.71□□□□□ -1.66
SNED1Q8TER0 OR5B10P-201ENST00000532869 642 ntBASIC4.71□□□□□ -1.66
SNED1Q8TER0 AL121594.4-201ENST00000556211 1196 ntBASIC4.71□□□□□ -1.66
SNED1Q8TER0 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC4.71□□□□□ -1.66
SNED1Q8TER0 AC138473.1-201ENST00000605717 526 ntBASIC4.71□□□□□ -1.66
SNED1Q8TER0 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC4.71□□□□□ -1.66
SNED1Q8TER0 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
SNED1Q8TER0 SAMMSON-213ENST00000641336 1521 ntBASIC4.71□□□□□ -1.66
SNED1Q8TER0 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.7□□□□□ -1.66
SNED1Q8TER0 MTCO1P22-201ENST00000604619 1360 ntBASIC4.7□□□□□ -1.66
SNED1Q8TER0 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SNED1Q8TER0 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SNED1Q8TER0 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SNED1Q8TER0 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SNED1Q8TER0 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.7□□□□□ -1.66
SNED1Q8TER0 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.7□□□□□ -1.66
SNED1Q8TER0 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SNED1Q8TER0 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
SNED1Q8TER0 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC4.7□□□□□ -1.66
SNED1Q8TER0 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.7□□□□□ -1.66
SNED1Q8TER0 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
SNED1Q8TER0 RNA5SP146-201ENST00000410743 123 ntBASIC4.7□□□□□ -1.66
SNED1Q8TER0 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC4.7□□□□□ -1.66
SNED1Q8TER0 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC4.7□□□□□ -1.66
SNED1Q8TER0 FAR1P1-201ENST00000427163 934 ntBASIC4.7□□□□□ -1.66
SNED1Q8TER0 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC4.7□□□□□ -1.66
SNED1Q8TER0 AC002553.2-201ENST00000453217 340 ntBASIC4.7□□□□□ -1.66
SNED1Q8TER0 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.7□□□□□ -1.66
SNED1Q8TER0 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC4.7□□□□□ -1.66
SNED1Q8TER0 RPL7P24-201ENST00000493052 752 ntBASIC4.7□□□□□ -1.66
SNED1Q8TER0 AC084759.1-201ENST00000561168 290 ntBASIC4.7□□□□□ -1.66
SNED1Q8TER0 MTND6P33-201ENST00000571794 183 ntBASIC4.7□□□□□ -1.66
SNED1Q8TER0 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.7□□□□□ -1.66
SNED1Q8TER0 AC097504.2-201ENST00000608088 454 ntBASIC4.7□□□□□ -1.66
SNED1Q8TER0 AC018645.2-201ENST00000609151 472 ntBASIC4.7□□□□□ -1.66
SNED1Q8TER0 AC084782.3-201ENST00000612282 578 ntBASIC4.7□□□□□ -1.66
SNED1Q8TER0 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms