Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 NCAPGP2-201ENST00000557911 754 ntBASIC2.48□□□□□ -2.01
ALMS1Q8TCU4 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
ALMS1Q8TCU4 AL031985.3-201ENST00000565390 2449 ntBASIC2.48□□□□□ -2.01
ALMS1Q8TCU4 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC2.48□□□□□ -2.01
ALMS1Q8TCU4 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
ALMS1Q8TCU4 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC2.48□□□□□ -2.01
ALMS1Q8TCU4 AL138820.1-201ENST00000617901 5305 ntBASIC2.48□□□□□ -2.01
ALMS1Q8TCU4 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
ALMS1Q8TCU4 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
ALMS1Q8TCU4 HSPA8P17-201ENST00000427029 1382 ntBASIC2.48□□□□□ -2.01
ALMS1Q8TCU4 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
ALMS1Q8TCU4 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.48□□□□□ -2.01
ALMS1Q8TCU4 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC2.48□□□□□ -2.01
ALMS1Q8TCU4 AC073335.1-201ENST00000427776 363 ntBASIC2.48□□□□□ -2.01
ALMS1Q8TCU4 AC108941.1-201ENST00000502853 530 ntBASIC2.48□□□□□ -2.01
ALMS1Q8TCU4 SUMO2P4-201ENST00000504193 276 ntBASIC2.48□□□□□ -2.01
ALMS1Q8TCU4 AC010486.1-201ENST00000511793 424 ntBASIC2.48□□□□□ -2.01
ALMS1Q8TCU4 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC2.48□□□□□ -2.01
ALMS1Q8TCU4 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.48□□□□□ -2.01
ALMS1Q8TCU4 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.48□□□□□ -2.01
ALMS1Q8TCU4 AC084036.1-201ENST00000609190 508 ntBASIC2.48□□□□□ -2.01
ALMS1Q8TCU4 AC026422.1-201ENST00000623961 452 ntBASIC2.48□□□□□ -2.01
ALMS1Q8TCU4 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC2.48□□□□□ -2.01
ALMS1Q8TCU4 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC2.48□□□□□ -2.01
ALMS1Q8TCU4 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
ALMS1Q8TCU4 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
ALMS1Q8TCU4 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
ALMS1Q8TCU4 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.47□□□□□ -2.01
ALMS1Q8TCU4 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
ALMS1Q8TCU4 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.47□□□□□ -2.01
ALMS1Q8TCU4 HSPD1P11-201ENST00000508643 1702 ntBASIC2.47□□□□□ -2.01
ALMS1Q8TCU4 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC2.47□□□□□ -2.01
ALMS1Q8TCU4 FTX-210ENST00000603037 8347 ntTSL 5 BASIC2.47□□□□□ -2.01
ALMS1Q8TCU4 FRG1CP-201ENST00000358464 769 ntBASIC2.47□□□□□ -2.01
ALMS1Q8TCU4 RNU6-301P-201ENST00000384277 107 ntBASIC2.47□□□□□ -2.01
ALMS1Q8TCU4 OR51A6P-201ENST00000418680 1004 ntBASIC2.47□□□□□ -2.01
ALMS1Q8TCU4 AC093663.1-201ENST00000497190 394 ntBASIC2.47□□□□□ -2.01
ALMS1Q8TCU4 AL121603.1-201ENST00000553815 142 ntBASIC2.47□□□□□ -2.01
ALMS1Q8TCU4 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC2.47□□□□□ -2.01
ALMS1Q8TCU4 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC2.47□□□□□ -2.01
ALMS1Q8TCU4 AC015922.4-201ENST00000612568 690 ntBASIC2.47□□□□□ -2.01
ALMS1Q8TCU4 AP000553.6-201ENST00000641242 118 ntBASIC2.47□□□□□ -2.01
ALMS1Q8TCU4 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
ALMS1Q8TCU4 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
ALMS1Q8TCU4 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.47□□□□□ -2.01
ALMS1Q8TCU4 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC2.47□□□□□ -2.01
ALMS1Q8TCU4 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC2.47□□□□□ -2.01
ALMS1Q8TCU4 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC2.47□□□□□ -2.01
ALMS1Q8TCU4 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC2.47□□□□□ -2.01
ALMS1Q8TCU4 VWA8P1-201ENST00000510889 176 ntBASIC2.47□□□□□ -2.01
ALMS1Q8TCU4 RNA5SP164-201ENST00000516533 110 ntBASIC2.47□□□□□ -2.01
ALMS1Q8TCU4 AC008011.1-201ENST00000545989 227 ntBASIC2.47□□□□□ -2.01
ALMS1Q8TCU4 SNORA62.6-201ENST00000606322 83 ntBASIC2.47□□□□□ -2.01
ALMS1Q8TCU4 AC012603.1-201ENST00000606424 528 ntBASIC2.47□□□□□ -2.01
ALMS1Q8TCU4 AC128687.2-201ENST00000609657 566 ntBASIC2.47□□□□□ -2.01
ALMS1Q8TCU4 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC2.47□□□□□ -2.01
ALMS1Q8TCU4 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
ALMS1Q8TCU4 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.47□□□□□ -2.01
ALMS1Q8TCU4 AC017007.4-201ENST00000503353 1352 ntBASIC2.47□□□□□ -2.01
ALMS1Q8TCU4 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
ALMS1Q8TCU4 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC2.47□□□□□ -2.01
ALMS1Q8TCU4 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.47□□□□□ -2.01
ALMS1Q8TCU4 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
ALMS1Q8TCU4 ARF4P3-201ENST00000397387 509 ntBASIC2.47□□□□□ -2.01
ALMS1Q8TCU4 RNA5SP80-201ENST00000410475 111 ntBASIC2.47□□□□□ -2.01
ALMS1Q8TCU4 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC2.47□□□□□ -2.01
ALMS1Q8TCU4 ELOCP8-201ENST00000439309 332 ntBASIC2.47□□□□□ -2.01
ALMS1Q8TCU4 AC107083.1-201ENST00000439643 279 ntBASIC2.47□□□□□ -2.01
ALMS1Q8TCU4 ELOCP15-201ENST00000442090 332 ntBASIC2.47□□□□□ -2.01
ALMS1Q8TCU4 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC2.47□□□□□ -2.01
ALMS1Q8TCU4 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.47□□□□□ -2.01
ALMS1Q8TCU4 PTGES3P3-201ENST00000511479 482 ntBASIC2.47□□□□□ -2.01
ALMS1Q8TCU4 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.47□□□□□ -2.01
ALMS1Q8TCU4 RNA5SP341-201ENST00000516261 117 ntBASIC2.47□□□□□ -2.01
ALMS1Q8TCU4 RPL12P50-201ENST00000603116 116 ntBASIC2.47□□□□□ -2.01
ALMS1Q8TCU4 MKKS-203ENST00000609375 882 ntTSL 2 BASIC2.47□□□□□ -2.01
ALMS1Q8TCU4 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
ALMS1Q8TCU4 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
ALMS1Q8TCU4 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
ALMS1Q8TCU4 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC2.46□□□□□ -2.01
ALMS1Q8TCU4 MAPK10-320ENST00000641462 6696 ntBASIC2.46□□□□□ -2.01
ALMS1Q8TCU4 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC2.46□□□□□ -2.01
ALMS1Q8TCU4 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.46□□□□□ -2.01
ALMS1Q8TCU4 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC2.46□□□□□ -2.01
ALMS1Q8TCU4 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC2.46□□□□□ -2.01
ALMS1Q8TCU4 RNU6ATAC39P-201ENST00000516309 149 ntBASIC2.46□□□□□ -2.01
ALMS1Q8TCU4 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.46□□□□□ -2.01
ALMS1Q8TCU4 AC034105.3-201ENST00000565294 442 ntBASIC2.46□□□□□ -2.01
ALMS1Q8TCU4 HMGB1P50-201ENST00000605814 607 ntBASIC2.46□□□□□ -2.01
ALMS1Q8TCU4 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.01
ALMS1Q8TCU4 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC2.46□□□□□ -2.01
ALMS1Q8TCU4 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
ALMS1Q8TCU4 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
ALMS1Q8TCU4 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC2.46□□□□□ -2.02
ALMS1Q8TCU4 HMGB3P13-201ENST00000511263 607 ntBASIC2.46□□□□□ -2.02
ALMS1Q8TCU4 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.46□□□□□ -2.02
ALMS1Q8TCU4 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
ALMS1Q8TCU4 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
ALMS1Q8TCU4 AC018555.1-201ENST00000567548 1980 ntBASIC2.46□□□□□ -2.02
ALMS1Q8TCU4 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms