Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LSMEM1Q8N8F7 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LSMEM1Q8N8F7 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.39□□□□□ -1.71
LSMEM1Q8N8F7 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
LSMEM1Q8N8F7 RNU1-108P-201ENST00000362556 161 ntBASIC4.39□□□□□ -1.71
LSMEM1Q8N8F7 SNORA31-201ENST00000362607 130 ntBASIC4.39□□□□□ -1.71
LSMEM1Q8N8F7 RNU6-492P-201ENST00000363035 104 ntBASIC4.39□□□□□ -1.71
LSMEM1Q8N8F7 SNORA51.1-201ENST00000363243 140 ntBASIC4.39□□□□□ -1.71
LSMEM1Q8N8F7 SNORA7.2-201ENST00000364446 145 ntBASIC4.39□□□□□ -1.71
LSMEM1Q8N8F7 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
LSMEM1Q8N8F7 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.39□□□□□ -1.71
LSMEM1Q8N8F7 RNU6-298P-201ENST00000390888 96 ntBASIC4.39□□□□□ -1.71
LSMEM1Q8N8F7 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LSMEM1Q8N8F7 HDGFP1-201ENST00000405943 252 ntBASIC4.39□□□□□ -1.71
LSMEM1Q8N8F7 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.39□□□□□ -1.71
LSMEM1Q8N8F7 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.39□□□□□ -1.71
LSMEM1Q8N8F7 AC004552.1-201ENST00000419089 348 ntBASIC4.39□□□□□ -1.71
LSMEM1Q8N8F7 AC093162.1-201ENST00000419682 124 ntBASIC4.39□□□□□ -1.71
LSMEM1Q8N8F7 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.39□□□□□ -1.71
LSMEM1Q8N8F7 Z93242.1-201ENST00000427102 353 ntBASIC4.39□□□□□ -1.71
LSMEM1Q8N8F7 CNOT7P1-201ENST00000429006 852 ntBASIC4.39□□□□□ -1.71
LSMEM1Q8N8F7 SKP1P3-201ENST00000429280 487 ntBASIC4.39□□□□□ -1.71
LSMEM1Q8N8F7 MTCO1P3-201ENST00000429327 192 ntBASIC4.39□□□□□ -1.71
LSMEM1Q8N8F7 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.39□□□□□ -1.71
LSMEM1Q8N8F7 HMGB1P16-201ENST00000447155 540 ntBASIC4.39□□□□□ -1.71
LSMEM1Q8N8F7 AC104651.2-201ENST00000447549 528 ntBASIC4.39□□□□□ -1.71
LSMEM1Q8N8F7 RPS26P3-201ENST00000470205 348 ntBASIC4.39□□□□□ -1.71
LSMEM1Q8N8F7 TMED11P-201ENST00000479478 690 ntBASIC4.39□□□□□ -1.71
LSMEM1Q8N8F7 AC069528.1-202ENST00000482888 637 ntBASIC4.39□□□□□ -1.71
LSMEM1Q8N8F7 AC090543.2-201ENST00000483963 348 ntBASIC4.39□□□□□ -1.71
LSMEM1Q8N8F7 AC004057.1-201ENST00000485827 348 ntBASIC4.39□□□□□ -1.71
LSMEM1Q8N8F7 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LSMEM1Q8N8F7 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.39□□□□□ -1.71
LSMEM1Q8N8F7 GAPDHP56-201ENST00000506031 988 ntBASIC4.39□□□□□ -1.71
LSMEM1Q8N8F7 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.39□□□□□ -1.71
LSMEM1Q8N8F7 RNA5SP309-201ENST00000516670 106 ntBASIC4.39□□□□□ -1.71
LSMEM1Q8N8F7 PTK2-220ENST00000520151 573 ntTSL 4 BASIC4.39□□□□□ -1.71
LSMEM1Q8N8F7 IGHVIII-67-4-201ENST00000524281 296 ntBASIC4.39□□□□□ -1.71
LSMEM1Q8N8F7 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.39□□□□□ -1.71
LSMEM1Q8N8F7 FKBP1BP1-201ENST00000553366 325 ntBASIC4.39□□□□□ -1.71
LSMEM1Q8N8F7 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.39□□□□□ -1.71
LSMEM1Q8N8F7 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.39□□□□□ -1.71
LSMEM1Q8N8F7 AC122134.1-202ENST00000569111 1201 ntBASIC4.39□□□□□ -1.71
LSMEM1Q8N8F7 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LSMEM1Q8N8F7 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.39□□□□□ -1.71
LSMEM1Q8N8F7 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.39□□□□□ -1.71
LSMEM1Q8N8F7 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.39□□□□□ -1.71
LSMEM1Q8N8F7 SNRPGP15-201ENST00000600149 222 ntBASIC4.39□□□□□ -1.71
LSMEM1Q8N8F7 AC020910.3-201ENST00000603701 874 ntBASIC4.39□□□□□ -1.71
LSMEM1Q8N8F7 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC4.39□□□□□ -1.71
LSMEM1Q8N8F7 MIR6862-1-201ENST00000613016 70 ntBASIC4.39□□□□□ -1.71
LSMEM1Q8N8F7 MIR6862-2-201ENST00000614755 70 ntBASIC4.39□□□□□ -1.71
LSMEM1Q8N8F7 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC4.39□□□□□ -1.71
LSMEM1Q8N8F7 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
LSMEM1Q8N8F7 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
LSMEM1Q8N8F7 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
LSMEM1Q8N8F7 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.39□□□□□ -1.71
LSMEM1Q8N8F7 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
LSMEM1Q8N8F7 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LSMEM1Q8N8F7 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LSMEM1Q8N8F7 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LSMEM1Q8N8F7 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
LSMEM1Q8N8F7 AC130650.2-201ENST00000618736 2403 ntBASIC4.38□□□□□ -1.71
LSMEM1Q8N8F7 IRF5P1-201ENST00000504852 2164 ntBASIC4.38□□□□□ -1.71
LSMEM1Q8N8F7 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
LSMEM1Q8N8F7 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
LSMEM1Q8N8F7 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
LSMEM1Q8N8F7 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.38□□□□□ -1.71
LSMEM1Q8N8F7 AC008725.1-201ENST00000605123 2263 ntBASIC4.38□□□□□ -1.71
LSMEM1Q8N8F7 Z99496.1-201ENST00000469424 1477 ntBASIC4.38□□□□□ -1.71
LSMEM1Q8N8F7 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
LSMEM1Q8N8F7 AC103591.2-201ENST00000265259 766 ntBASIC4.38□□□□□ -1.71
LSMEM1Q8N8F7 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
LSMEM1Q8N8F7 RN7SKP95-201ENST00000362860 303 ntBASIC4.38□□□□□ -1.71
LSMEM1Q8N8F7 RNU1-83P-201ENST00000363426 164 ntBASIC4.38□□□□□ -1.71
LSMEM1Q8N8F7 RNU4-4P-201ENST00000364588 130 ntBASIC4.38□□□□□ -1.71
LSMEM1Q8N8F7 Y_RNA.493-201ENST00000384422 102 ntBASIC4.38□□□□□ -1.71
LSMEM1Q8N8F7 MIR217-201ENST00000384817 110 ntBASIC4.38□□□□□ -1.71
LSMEM1Q8N8F7 RNU6-1300P-201ENST00000391046 108 ntBASIC4.38□□□□□ -1.71
LSMEM1Q8N8F7 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
LSMEM1Q8N8F7 MTCO1P56-201ENST00000401674 224 ntBASIC4.38□□□□□ -1.71
LSMEM1Q8N8F7 ARL4AP5-201ENST00000404372 599 ntBASIC4.38□□□□□ -1.71
LSMEM1Q8N8F7 AL355143.1-201ENST00000407101 841 ntBASIC4.38□□□□□ -1.71
LSMEM1Q8N8F7 RN7SKP100-201ENST00000411258 284 ntBASIC4.38□□□□□ -1.71
LSMEM1Q8N8F7 MTCO3P1-205ENST00000422088 832 ntBASIC4.38□□□□□ -1.71
LSMEM1Q8N8F7 AL645608.4-201ENST00000423619 154 ntBASIC4.38□□□□□ -1.71
LSMEM1Q8N8F7 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC4.38□□□□□ -1.71
LSMEM1Q8N8F7 AL138799.3-201ENST00000438968 350 ntBASIC4.38□□□□□ -1.71
LSMEM1Q8N8F7 ZNF736P1Y-201ENST00000440402 1276 ntBASIC4.38□□□□□ -1.71
LSMEM1Q8N8F7 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.38□□□□□ -1.71
LSMEM1Q8N8F7 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.38□□□□□ -1.71
LSMEM1Q8N8F7 RPL5P24-201ENST00000463742 885 ntBASIC4.38□□□□□ -1.71
LSMEM1Q8N8F7 AC022034.3-201ENST00000471393 478 ntBASIC4.38□□□□□ -1.71
LSMEM1Q8N8F7 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.38□□□□□ -1.71
LSMEM1Q8N8F7 AC008694.2-201ENST00000517591 306 ntBASIC4.38□□□□□ -1.71
LSMEM1Q8N8F7 IGHV3-32-201ENST00000519182 355 ntBASIC4.38□□□□□ -1.71
LSMEM1Q8N8F7 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC4.38□□□□□ -1.71
LSMEM1Q8N8F7 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LSMEM1Q8N8F7 AP000790.1-201ENST00000528891 737 ntBASIC4.38□□□□□ -1.71
LSMEM1Q8N8F7 MTND5P21-201ENST00000531961 522 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms