Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 Y_RNA.301-201ENST00000364990 103 ntBASIC6.56□□□□□ -1.36
FOXR1Q6PIV2 Y_RNA.339-201ENST00000365325 102 ntBASIC6.56□□□□□ -1.36
FOXR1Q6PIV2 RNA5SP279-201ENST00000365513 117 ntBASIC6.56□□□□□ -1.36
FOXR1Q6PIV2 Y_RNA.527-201ENST00000384573 102 ntBASIC6.56□□□□□ -1.36
FOXR1Q6PIV2 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
FOXR1Q6PIV2 MIR1303-201ENST00000408625 86 ntBASIC6.56□□□□□ -1.36
FOXR1Q6PIV2 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC6.56□□□□□ -1.36
FOXR1Q6PIV2 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC6.56□□□□□ -1.36
FOXR1Q6PIV2 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.56□□□□□ -1.36
FOXR1Q6PIV2 AL807761.1-201ENST00000417622 171 ntBASIC6.56□□□□□ -1.36
FOXR1Q6PIV2 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC6.56□□□□□ -1.36
FOXR1Q6PIV2 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC6.56□□□□□ -1.36
FOXR1Q6PIV2 AC007562.1-201ENST00000421819 517 ntBASIC6.56□□□□□ -1.36
FOXR1Q6PIV2 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC6.56□□□□□ -1.36
FOXR1Q6PIV2 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC6.56□□□□□ -1.36
FOXR1Q6PIV2 AL590128.1-201ENST00000433407 286 ntBASIC6.56□□□□□ -1.36
FOXR1Q6PIV2 USP24P1-201ENST00000433802 779 ntBASIC6.56□□□□□ -1.36
FOXR1Q6PIV2 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.56□□□□□ -1.36
FOXR1Q6PIV2 SNRPBP1-201ENST00000443634 282 ntBASIC6.56□□□□□ -1.36
FOXR1Q6PIV2 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC6.56□□□□□ -1.36
FOXR1Q6PIV2 AC007547.1-201ENST00000462177 490 ntBASIC6.56□□□□□ -1.36
FOXR1Q6PIV2 AC097493.1-201ENST00000463958 372 ntBASIC6.56□□□□□ -1.36
FOXR1Q6PIV2 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.56□□□□□ -1.36
FOXR1Q6PIV2 RN7SL413P-201ENST00000482700 297 ntBASIC6.56□□□□□ -1.36
FOXR1Q6PIV2 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
FOXR1Q6PIV2 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC6.56□□□□□ -1.36
FOXR1Q6PIV2 SNX18P23-201ENST00000510867 677 ntBASIC6.56□□□□□ -1.36
FOXR1Q6PIV2 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC6.56□□□□□ -1.36
FOXR1Q6PIV2 AC005363.1-201ENST00000530779 351 ntBASIC6.56□□□□□ -1.36
FOXR1Q6PIV2 AP002404.1-201ENST00000532005 451 ntBASIC6.56□□□□□ -1.36
FOXR1Q6PIV2 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
FOXR1Q6PIV2 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
FOXR1Q6PIV2 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC6.56□□□□□ -1.36
FOXR1Q6PIV2 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC6.56□□□□□ -1.36
FOXR1Q6PIV2 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC6.56□□□□□ -1.36
FOXR1Q6PIV2 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC6.56□□□□□ -1.36
FOXR1Q6PIV2 RPL29P33-201ENST00000587474 316 ntBASIC6.56□□□□□ -1.36
FOXR1Q6PIV2 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC6.56□□□□□ -1.36
FOXR1Q6PIV2 AC009237.17-201ENST00000618111 748 ntBASIC6.56□□□□□ -1.36
FOXR1Q6PIV2 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC6.56□□□□□ -1.36
FOXR1Q6PIV2 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC6.56□□□□□ -1.36
FOXR1Q6PIV2 TEX41-254ENST00000626394 423 ntTSL 5 BASIC6.56□□□□□ -1.36
FOXR1Q6PIV2 NAA50-211ENST00000630058 177 ntTSL 5 BASIC6.56□□□□□ -1.36
FOXR1Q6PIV2 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC6.56□□□□□ -1.36
FOXR1Q6PIV2 OR2L1P-202ENST00000641567 1023 ntBASIC6.56□□□□□ -1.36
FOXR1Q6PIV2 MIR193BHG-214ENST00000641765 509 ntBASIC6.56□□□□□ -1.36
FOXR1Q6PIV2 AC022325.1-201ENST00000502748 2199 ntBASIC6.56□□□□□ -1.36
FOXR1Q6PIV2 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
FOXR1Q6PIV2 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
FOXR1Q6PIV2 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
FOXR1Q6PIV2 AC009831.5-201ENST00000624000 3189 ntBASIC6.56□□□□□ -1.36
FOXR1Q6PIV2 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC6.56□□□□□ -1.36
FOXR1Q6PIV2 AC004158.1-201ENST00000564508 4319 ntBASIC6.56□□□□□ -1.36
FOXR1Q6PIV2 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.56□□□□□ -1.36
FOXR1Q6PIV2 AC006020.1-201ENST00000420179 1854 ntBASIC6.56□□□□□ -1.36
FOXR1Q6PIV2 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC6.55□□□□□ -1.36
FOXR1Q6PIV2 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
FOXR1Q6PIV2 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC6.55□□□□□ -1.36
FOXR1Q6PIV2 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.55□□□□□ -1.36
FOXR1Q6PIV2 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
FOXR1Q6PIV2 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.55□□□□□ -1.36
FOXR1Q6PIV2 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.55□□□□□ -1.36
FOXR1Q6PIV2 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.55□□□□□ -1.36
FOXR1Q6PIV2 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
FOXR1Q6PIV2 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.55□□□□□ -1.36
FOXR1Q6PIV2 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC6.55□□□□□ -1.36
FOXR1Q6PIV2 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.55□□□□□ -1.36
FOXR1Q6PIV2 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.55□□□□□ -1.36
FOXR1Q6PIV2 AOX3P-204ENST00000491025 2107 ntBASIC6.55□□□□□ -1.36
FOXR1Q6PIV2 AC018765.1-201ENST00000623357 3446 ntBASIC6.55□□□□□ -1.36
FOXR1Q6PIV2 AL731532.1-201ENST00000623972 4236 ntBASIC6.55□□□□□ -1.36
FOXR1Q6PIV2 AP002833.3-201ENST00000625075 2265 ntBASIC6.55□□□□□ -1.36
FOXR1Q6PIV2 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
FOXR1Q6PIV2 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.55□□□□□ -1.36
FOXR1Q6PIV2 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
FOXR1Q6PIV2 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC6.55□□□□□ -1.36
FOXR1Q6PIV2 SNORD35A-201ENST00000363389 86 ntBASIC6.55□□□□□ -1.36
FOXR1Q6PIV2 Y_RNA.158-201ENST00000363651 101 ntBASIC6.55□□□□□ -1.36
FOXR1Q6PIV2 SNORD3H-201ENST00000384486 214 ntBASIC6.55□□□□□ -1.36
FOXR1Q6PIV2 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
FOXR1Q6PIV2 AL023284.3-201ENST00000407767 334 ntBASIC6.55□□□□□ -1.36
FOXR1Q6PIV2 RNU6ATAC23P-201ENST00000408448 123 ntBASIC6.55□□□□□ -1.36
FOXR1Q6PIV2 CHEK2P3-201ENST00000416118 248 ntBASIC6.55□□□□□ -1.36
FOXR1Q6PIV2 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC6.55□□□□□ -1.36
FOXR1Q6PIV2 AC092634.6-201ENST00000418558 192 ntBASIC6.55□□□□□ -1.36
FOXR1Q6PIV2 RPL23AP30-201ENST00000432419 501 ntBASIC6.55□□□□□ -1.36
FOXR1Q6PIV2 AL645939.3-201ENST00000435408 225 ntBASIC6.55□□□□□ -1.36
FOXR1Q6PIV2 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC6.55□□□□□ -1.36
FOXR1Q6PIV2 TXNP5-201ENST00000441043 315 ntBASIC6.55□□□□□ -1.36
FOXR1Q6PIV2 GAPDHP20-201ENST00000444107 1007 ntBASIC6.55□□□□□ -1.36
FOXR1Q6PIV2 AC007383.1-201ENST00000445875 636 ntBASIC6.55□□□□□ -1.36
FOXR1Q6PIV2 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC6.55□□□□□ -1.36
FOXR1Q6PIV2 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC6.55□□□□□ -1.36
FOXR1Q6PIV2 RPL23AP64-201ENST00000469465 435 ntBASIC6.55□□□□□ -1.36
FOXR1Q6PIV2 TRBV8-2-201ENST00000475637 270 ntBASIC6.55□□□□□ -1.36
FOXR1Q6PIV2 AC112484.3-201ENST00000505910 329 ntBASIC6.55□□□□□ -1.36
FOXR1Q6PIV2 AC006499.2-201ENST00000513470 337 ntBASIC6.55□□□□□ -1.36
FOXR1Q6PIV2 OR52H2P-201ENST00000514607 902 ntBASIC6.55□□□□□ -1.36
FOXR1Q6PIV2 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
FOXR1Q6PIV2 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms