Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC4.94□□□□□ -1.62
RNF220Q5VTB9 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC4.94□□□□□ -1.62
RNF220Q5VTB9 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC4.94□□□□□ -1.62
RNF220Q5VTB9 MTND2P4-201ENST00000445034 1004 ntBASIC4.94□□□□□ -1.62
RNF220Q5VTB9 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC4.94□□□□□ -1.62
RNF220Q5VTB9 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC4.94□□□□□ -1.62
RNF220Q5VTB9 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC4.94□□□□□ -1.62
RNF220Q5VTB9 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.94□□□□□ -1.62
RNF220Q5VTB9 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC4.94□□□□□ -1.62
RNF220Q5VTB9 AC092754.2-201ENST00000463506 460 ntBASIC4.94□□□□□ -1.62
RNF220Q5VTB9 AC097493.1-201ENST00000463958 372 ntBASIC4.94□□□□□ -1.62
RNF220Q5VTB9 AC108751.2-201ENST00000469993 231 ntBASIC4.94□□□□□ -1.62
RNF220Q5VTB9 AC079841.1-201ENST00000481228 950 ntBASIC4.94□□□□□ -1.62
RNF220Q5VTB9 AC090686.1-201ENST00000481577 749 ntBASIC4.94□□□□□ -1.62
RNF220Q5VTB9 AC092045.1-201ENST00000495716 1231 ntBASIC4.94□□□□□ -1.62
RNF220Q5VTB9 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC4.94□□□□□ -1.62
RNF220Q5VTB9 RN7SKP99-201ENST00000517028 307 ntBASIC4.94□□□□□ -1.62
RNF220Q5VTB9 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC4.94□□□□□ -1.62
RNF220Q5VTB9 OR5AN2P-201ENST00000534535 896 ntBASIC4.94□□□□□ -1.62
RNF220Q5VTB9 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RNF220Q5VTB9 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC4.94□□□□□ -1.62
RNF220Q5VTB9 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC4.94□□□□□ -1.62
RNF220Q5VTB9 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.94□□□□□ -1.62
RNF220Q5VTB9 AC015720.2-201ENST00000567709 334 ntBASIC4.94□□□□□ -1.62
RNF220Q5VTB9 AC012435.1-202ENST00000568772 240 ntBASIC4.94□□□□□ -1.62
RNF220Q5VTB9 MIR1273E-201ENST00000581165 102 ntBASIC4.94□□□□□ -1.62
RNF220Q5VTB9 MRO-208ENST00000588444 866 ntTSL 3 BASIC4.94□□□□□ -1.62
RNF220Q5VTB9 AC067852.4-201ENST00000590314 478 ntBASIC4.94□□□□□ -1.62
RNF220Q5VTB9 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.94□□□□□ -1.62
RNF220Q5VTB9 BNIP3P11-201ENST00000603878 563 ntBASIC4.94□□□□□ -1.62
RNF220Q5VTB9 AC024560.3-201ENST00000608482 349 ntBASIC4.94□□□□□ -1.62
RNF220Q5VTB9 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.94□□□□□ -1.62
RNF220Q5VTB9 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
RNF220Q5VTB9 PCMTD1P7-201ENST00000634506 357 ntBASIC4.94□□□□□ -1.62
RNF220Q5VTB9 U6.101-201ENST00000637707 76 ntBASIC4.94□□□□□ -1.62
RNF220Q5VTB9 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.94□□□□□ -1.62
RNF220Q5VTB9 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RNF220Q5VTB9 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
RNF220Q5VTB9 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
RNF220Q5VTB9 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.94□□□□□ -1.62
RNF220Q5VTB9 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
RNF220Q5VTB9 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
RNF220Q5VTB9 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
RNF220Q5VTB9 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.93□□□□□ -1.62
RNF220Q5VTB9 SAGE4P-201ENST00000442271 3381 ntBASIC4.93□□□□□ -1.62
RNF220Q5VTB9 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RNF220Q5VTB9 AC130650.2-201ENST00000618736 2403 ntBASIC4.93□□□□□ -1.62
RNF220Q5VTB9 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
RNF220Q5VTB9 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.93□□□□□ -1.62
RNF220Q5VTB9 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.93□□□□□ -1.62
RNF220Q5VTB9 RNU6-500P-201ENST00000362349 107 ntBASIC4.93□□□□□ -1.62
RNF220Q5VTB9 RNA5SP510-201ENST00000364697 99 ntBASIC4.93□□□□□ -1.62
RNF220Q5VTB9 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC4.93□□□□□ -1.62
RNF220Q5VTB9 SNORD116-9-201ENST00000384000 95 ntBASIC4.93□□□□□ -1.62
RNF220Q5VTB9 SNORD116-3-201ENST00000384287 95 ntBASIC4.93□□□□□ -1.62
RNF220Q5VTB9 SNORA16A-201ENST00000384342 137 ntBASIC4.93□□□□□ -1.62
RNF220Q5VTB9 SNORD116-7-201ENST00000384404 95 ntBASIC4.93□□□□□ -1.62
RNF220Q5VTB9 SNORD116-5-201ENST00000384462 95 ntBASIC4.93□□□□□ -1.62
RNF220Q5VTB9 MIR621-201ENST00000384919 96 ntBASIC4.93□□□□□ -1.62
RNF220Q5VTB9 AL139128.1-201ENST00000413921 941 ntBASIC4.93□□□□□ -1.62
RNF220Q5VTB9 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.93□□□□□ -1.62
RNF220Q5VTB9 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.93□□□□□ -1.62
RNF220Q5VTB9 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.93□□□□□ -1.62
RNF220Q5VTB9 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC4.93□□□□□ -1.62
RNF220Q5VTB9 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC4.93□□□□□ -1.62
RNF220Q5VTB9 AC004448.2-201ENST00000422360 586 ntBASIC4.93□□□□□ -1.62
RNF220Q5VTB9 IPPKP1-201ENST00000422501 768 ntBASIC4.93□□□□□ -1.62
RNF220Q5VTB9 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.93□□□□□ -1.62
RNF220Q5VTB9 FABP7P2-201ENST00000429946 379 ntBASIC4.93□□□□□ -1.62
RNF220Q5VTB9 MTND1P20-201ENST00000430341 950 ntBASIC4.93□□□□□ -1.62
RNF220Q5VTB9 BMS1P19-201ENST00000433925 393 ntBASIC4.93□□□□□ -1.62
RNF220Q5VTB9 KCTD10P1-201ENST00000434203 625 ntBASIC4.93□□□□□ -1.62
RNF220Q5VTB9 GSTM5P1-201ENST00000434751 660 ntBASIC4.93□□□□□ -1.62
RNF220Q5VTB9 MTND4P32-201ENST00000437189 1237 ntBASIC4.93□□□□□ -1.62
RNF220Q5VTB9 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.93□□□□□ -1.62
RNF220Q5VTB9 AC118469.1-201ENST00000442943 488 ntBASIC4.93□□□□□ -1.62
RNF220Q5VTB9 EEF1B2P5-201ENST00000444820 548 ntBASIC4.93□□□□□ -1.62
RNF220Q5VTB9 AC073109.1-201ENST00000445066 978 ntBASIC4.93□□□□□ -1.62
RNF220Q5VTB9 HMGN1P36-201ENST00000446623 298 ntBASIC4.93□□□□□ -1.62
RNF220Q5VTB9 AC104073.1-201ENST00000451988 151 ntBASIC4.93□□□□□ -1.62
RNF220Q5VTB9 RPS27AP8-201ENST00000452665 445 ntBASIC4.93□□□□□ -1.62
RNF220Q5VTB9 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC4.93□□□□□ -1.62
RNF220Q5VTB9 RPL7AP28-201ENST00000464513 571 ntBASIC4.93□□□□□ -1.62
RNF220Q5VTB9 RPS15AP17-201ENST00000470598 390 ntBASIC4.93□□□□□ -1.62
RNF220Q5VTB9 DEFB109F-201ENST00000491870 277 ntBASIC4.93□□□□□ -1.62
RNF220Q5VTB9 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.93□□□□□ -1.62
RNF220Q5VTB9 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.93□□□□□ -1.62
RNF220Q5VTB9 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC4.93□□□□□ -1.62
RNF220Q5VTB9 AC006499.2-201ENST00000513470 337 ntBASIC4.93□□□□□ -1.62
RNF220Q5VTB9 AC016065.2-201ENST00000514530 444 ntBASIC4.93□□□□□ -1.62
RNF220Q5VTB9 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.93□□□□□ -1.62
RNF220Q5VTB9 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
RNF220Q5VTB9 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.93□□□□□ -1.62
RNF220Q5VTB9 AC090819.1-201ENST00000523800 1111 ntBASIC4.93□□□□□ -1.62
RNF220Q5VTB9 AP004607.2-201ENST00000533949 322 ntBASIC4.93□□□□□ -1.62
RNF220Q5VTB9 HSPE1P3-201ENST00000559254 309 ntBASIC4.93□□□□□ -1.62
RNF220Q5VTB9 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC4.93□□□□□ -1.62
RNF220Q5VTB9 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC4.93□□□□□ -1.62
RNF220Q5VTB9 AC104785.1-201ENST00000603220 588 ntBASIC4.93□□□□□ -1.62
RNF220Q5VTB9 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms