Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 CDH12P1-201ENST00000518435 295 ntBASIC3.14□□□□□ -1.91
FAM78BQ5VT40 CR383656.6-201ENST00000550518 394 ntBASIC3.14□□□□□ -1.91
FAM78BQ5VT40 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.14□□□□□ -1.91
FAM78BQ5VT40 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
FAM78BQ5VT40 AC068831.4-201ENST00000556118 109 ntBASIC3.14□□□□□ -1.91
FAM78BQ5VT40 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.14□□□□□ -1.91
FAM78BQ5VT40 AC025627.2-201ENST00000576220 160 ntBASIC3.14□□□□□ -1.91
FAM78BQ5VT40 MIR3186-201ENST00000577404 85 ntBASIC3.14□□□□□ -1.91
FAM78BQ5VT40 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.14□□□□□ -1.91
FAM78BQ5VT40 AC104785.1-201ENST00000603220 588 ntBASIC3.14□□□□□ -1.91
FAM78BQ5VT40 AC114878.2-201ENST00000604863 1251 ntBASIC3.14□□□□□ -1.91
FAM78BQ5VT40 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.14□□□□□ -1.91
FAM78BQ5VT40 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC3.14□□□□□ -1.91
FAM78BQ5VT40 AL590410.1-201ENST00000617925 333 ntBASIC3.14□□□□□ -1.91
FAM78BQ5VT40 AC124312.6-202ENST00000623624 418 ntBASIC3.14□□□□□ -1.91
FAM78BQ5VT40 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.14□□□□□ -1.91
FAM78BQ5VT40 AL139254.3-201ENST00000641097 674 ntBASIC3.14□□□□□ -1.91
FAM78BQ5VT40 AC116667.1-201ENST00000604855 2072 ntBASIC3.14□□□□□ -1.91
FAM78BQ5VT40 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
FAM78BQ5VT40 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
FAM78BQ5VT40 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.14□□□□□ -1.91
FAM78BQ5VT40 AL353743.4-201ENST00000422653 1547 ntBASIC3.14□□□□□ -1.91
FAM78BQ5VT40 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
FAM78BQ5VT40 PRO1804-201ENST00000623780 2050 ntBASIC3.13□□□□□ -1.91
FAM78BQ5VT40 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
FAM78BQ5VT40 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
FAM78BQ5VT40 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
FAM78BQ5VT40 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
FAM78BQ5VT40 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
FAM78BQ5VT40 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.13□□□□□ -1.91
FAM78BQ5VT40 HMGB1P10-201ENST00000395823 563 ntBASIC3.13□□□□□ -1.91
FAM78BQ5VT40 MIR937-201ENST00000401271 86 ntBASIC3.13□□□□□ -1.91
FAM78BQ5VT40 AL035696.2-201ENST00000407941 709 ntBASIC3.13□□□□□ -1.91
FAM78BQ5VT40 RN7SKP182-201ENST00000410772 298 ntBASIC3.13□□□□□ -1.91
FAM78BQ5VT40 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.13□□□□□ -1.91
FAM78BQ5VT40 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.13□□□□□ -1.91
FAM78BQ5VT40 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.13□□□□□ -1.91
FAM78BQ5VT40 AL358472.1-201ENST00000431295 329 ntBASIC3.13□□□□□ -1.91
FAM78BQ5VT40 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
FAM78BQ5VT40 MTCO1P45-201ENST00000431457 267 ntBASIC3.13□□□□□ -1.91
FAM78BQ5VT40 CEACAMP9-201ENST00000442990 513 ntBASIC3.13□□□□□ -1.91
FAM78BQ5VT40 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
FAM78BQ5VT40 RPL7P1-201ENST00000468161 747 ntBASIC3.13□□□□□ -1.91
FAM78BQ5VT40 RPL7P9-201ENST00000468715 747 ntBASIC3.13□□□□□ -1.91
FAM78BQ5VT40 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.13□□□□□ -1.91
FAM78BQ5VT40 RPL21P103-201ENST00000479921 488 ntBASIC3.13□□□□□ -1.91
FAM78BQ5VT40 RN7SL459P-201ENST00000481078 302 ntBASIC3.13□□□□□ -1.91
FAM78BQ5VT40 RPL30P11-201ENST00000495304 339 ntBASIC3.13□□□□□ -1.91
FAM78BQ5VT40 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.13□□□□□ -1.91
FAM78BQ5VT40 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.13□□□□□ -1.91
FAM78BQ5VT40 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.13□□□□□ -1.91
FAM78BQ5VT40 AC093840.1-201ENST00000511599 336 ntBASIC3.13□□□□□ -1.91
FAM78BQ5VT40 AC023141.12-201ENST00000512399 199 ntBASIC3.13□□□□□ -1.91
FAM78BQ5VT40 MTND1P6-201ENST00000523621 946 ntBASIC3.13□□□□□ -1.91
FAM78BQ5VT40 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC3.13□□□□□ -1.91
FAM78BQ5VT40 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.13□□□□□ -1.91
FAM78BQ5VT40 AL389895.1-201ENST00000554127 252 ntBASIC3.13□□□□□ -1.91
FAM78BQ5VT40 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.13□□□□□ -1.91
FAM78BQ5VT40 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.13□□□□□ -1.91
FAM78BQ5VT40 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.13□□□□□ -1.91
FAM78BQ5VT40 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.13□□□□□ -1.91
FAM78BQ5VT40 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC3.13□□□□□ -1.91
FAM78BQ5VT40 LLPHP1-201ENST00000603571 367 ntBASIC3.13□□□□□ -1.91
FAM78BQ5VT40 AL356218.2-201ENST00000605264 187 ntBASIC3.13□□□□□ -1.91
FAM78BQ5VT40 MIR6820-201ENST00000611508 62 ntBASIC3.13□□□□□ -1.91
FAM78BQ5VT40 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC3.13□□□□□ -1.91
FAM78BQ5VT40 AC015726.3-201ENST00000624501 418 ntBASIC3.13□□□□□ -1.91
FAM78BQ5VT40 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.13□□□□□ -1.91
FAM78BQ5VT40 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3.13□□□□□ -1.91
FAM78BQ5VT40 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
FAM78BQ5VT40 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
FAM78BQ5VT40 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.13□□□□□ -1.91
FAM78BQ5VT40 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
FAM78BQ5VT40 AL592494.2-201ENST00000425455 1548 ntBASIC3.13□□□□□ -1.91
FAM78BQ5VT40 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.13□□□□□ -1.91
FAM78BQ5VT40 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
FAM78BQ5VT40 AL359715.4-201ENST00000606629 1436 ntBASIC3.12□□□□□ -1.91
FAM78BQ5VT40 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
FAM78BQ5VT40 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
FAM78BQ5VT40 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
FAM78BQ5VT40 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
FAM78BQ5VT40 SNORA60-201ENST00000362396 134 ntBASIC3.12□□□□□ -1.91
FAM78BQ5VT40 RNA5SP509-201ENST00000364577 119 ntBASIC3.12□□□□□ -1.91
FAM78BQ5VT40 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
FAM78BQ5VT40 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC3.12□□□□□ -1.91
FAM78BQ5VT40 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
FAM78BQ5VT40 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC3.12□□□□□ -1.91
FAM78BQ5VT40 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.12□□□□□ -1.91
FAM78BQ5VT40 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
FAM78BQ5VT40 AC127526.1-201ENST00000417526 366 ntBASIC3.12□□□□□ -1.91
FAM78BQ5VT40 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.12□□□□□ -1.91
FAM78BQ5VT40 CBX1P1-201ENST00000440184 427 ntBASIC3.12□□□□□ -1.91
FAM78BQ5VT40 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.12□□□□□ -1.91
FAM78BQ5VT40 AL353898.1-201ENST00000444055 238 ntBASIC3.12□□□□□ -1.91
FAM78BQ5VT40 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
FAM78BQ5VT40 VN1R48P-201ENST00000448149 1036 ntBASIC3.12□□□□□ -1.91
FAM78BQ5VT40 AC104629.2-201ENST00000468627 598 ntBASIC3.12□□□□□ -1.91
FAM78BQ5VT40 AC011276.1-201ENST00000469688 323 ntBASIC3.12□□□□□ -1.91
FAM78BQ5VT40 RN7SL303P-201ENST00000469773 251 ntBASIC3.12□□□□□ -1.91
FAM78BQ5VT40 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms