Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AC092490.3-201ENST00000545370 572 ntBASIC4.99□□□□□ -1.61
CCDC38Q502W7 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC4.99□□□□□ -1.61
CCDC38Q502W7 MTCYBP28-201ENST00000566728 1132 ntBASIC4.99□□□□□ -1.61
CCDC38Q502W7 HNRNPCP4-201ENST00000571636 900 ntBASIC4.99□□□□□ -1.61
CCDC38Q502W7 MIR4691-201ENST00000583764 85 ntBASIC4.99□□□□□ -1.61
CCDC38Q502W7 AC067852.4-201ENST00000590314 478 ntBASIC4.99□□□□□ -1.61
CCDC38Q502W7 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.99□□□□□ -1.61
CCDC38Q502W7 AC025588.2-201ENST00000604851 466 ntBASIC4.99□□□□□ -1.61
CCDC38Q502W7 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.99□□□□□ -1.61
CCDC38Q502W7 AC107952.2-201ENST00000606048 486 ntBASIC4.99□□□□□ -1.61
CCDC38Q502W7 AC107075.1-201ENST00000613695 314 ntBASIC4.99□□□□□ -1.61
CCDC38Q502W7 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.99□□□□□ -1.61
CCDC38Q502W7 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC38Q502W7 MIR6719-201ENST00000622428 87 ntBASIC4.99□□□□□ -1.61
CCDC38Q502W7 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.99□□□□□ -1.61
CCDC38Q502W7 AC009452.1-201ENST00000640823 606 ntBASIC4.99□□□□□ -1.61
CCDC38Q502W7 LINC01739-205ENST00000641890 573 ntBASIC4.99□□□□□ -1.61
CCDC38Q502W7 AC011978.2-201ENST00000569835 2054 ntBASIC4.99□□□□□ -1.61
CCDC38Q502W7 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC38Q502W7 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC38Q502W7 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.99□□□□□ -1.61
CCDC38Q502W7 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC38Q502W7 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC38Q502W7 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC38Q502W7 SEPT7P7-201ENST00000420492 1301 ntBASIC4.98□□□□□ -1.61
CCDC38Q502W7 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.98□□□□□ -1.61
CCDC38Q502W7 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC38Q502W7 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.98□□□□□ -1.61
CCDC38Q502W7 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC38Q502W7 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC38Q502W7 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
CCDC38Q502W7 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.98□□□□□ -1.61
CCDC38Q502W7 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.98□□□□□ -1.61
CCDC38Q502W7 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC38Q502W7 RNU6-251P-201ENST00000363235 104 ntBASIC4.98□□□□□ -1.61
CCDC38Q502W7 RNU1-83P-201ENST00000363426 164 ntBASIC4.98□□□□□ -1.61
CCDC38Q502W7 Y_RNA.465-201ENST00000384293 102 ntBASIC4.98□□□□□ -1.61
CCDC38Q502W7 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.98□□□□□ -1.61
CCDC38Q502W7 HDGFP1-201ENST00000405943 252 ntBASIC4.98□□□□□ -1.61
CCDC38Q502W7 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.98□□□□□ -1.61
CCDC38Q502W7 RPS3AP9-201ENST00000417027 792 ntBASIC4.98□□□□□ -1.61
CCDC38Q502W7 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.98□□□□□ -1.61
CCDC38Q502W7 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.98□□□□□ -1.61
CCDC38Q502W7 PDSS1P1-201ENST00000422953 1114 ntBASIC4.98□□□□□ -1.61
CCDC38Q502W7 SKP1P3-201ENST00000429280 487 ntBASIC4.98□□□□□ -1.61
CCDC38Q502W7 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.98□□□□□ -1.61
CCDC38Q502W7 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.98□□□□□ -1.61
CCDC38Q502W7 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC38Q502W7 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.98□□□□□ -1.61
CCDC38Q502W7 RPL23AP76-201ENST00000441860 458 ntBASIC4.98□□□□□ -1.61
CCDC38Q502W7 TDGF1P1-201ENST00000445734 527 ntBASIC4.98□□□□□ -1.61
CCDC38Q502W7 MTCO2P25-201ENST00000447065 681 ntBASIC4.98□□□□□ -1.61
CCDC38Q502W7 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC4.98□□□□□ -1.61
CCDC38Q502W7 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.98□□□□□ -1.61
CCDC38Q502W7 RPL5P30-201ENST00000465511 891 ntBASIC4.98□□□□□ -1.61
CCDC38Q502W7 AC087879.1-201ENST00000474343 374 ntBASIC4.98□□□□□ -1.61
CCDC38Q502W7 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC4.98□□□□□ -1.61
CCDC38Q502W7 RN7SL244P-201ENST00000493405 297 ntBASIC4.98□□□□□ -1.61
CCDC38Q502W7 RPS4XP18-201ENST00000495480 763 ntBASIC4.98□□□□□ -1.61
CCDC38Q502W7 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC4.98□□□□□ -1.61
CCDC38Q502W7 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC4.98□□□□□ -1.61
CCDC38Q502W7 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.98□□□□□ -1.61
CCDC38Q502W7 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC38Q502W7 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC4.98□□□□□ -1.61
CCDC38Q502W7 AC008837.2-201ENST00000513076 418 ntBASIC4.98□□□□□ -1.61
CCDC38Q502W7 AC004980.4-201ENST00000513375 203 ntBASIC4.98□□□□□ -1.61
CCDC38Q502W7 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.98□□□□□ -1.61
CCDC38Q502W7 RNU6-1225P-201ENST00000516336 65 ntBASIC4.98□□□□□ -1.61
CCDC38Q502W7 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC4.98□□□□□ -1.61
CCDC38Q502W7 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.98□□□□□ -1.61
CCDC38Q502W7 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.98□□□□□ -1.61
CCDC38Q502W7 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.98□□□□□ -1.61
CCDC38Q502W7 MTND2P26-201ENST00000528255 1029 ntBASIC4.98□□□□□ -1.61
CCDC38Q502W7 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.98□□□□□ -1.61
CCDC38Q502W7 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.98□□□□□ -1.61
CCDC38Q502W7 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC38Q502W7 AL161713.1-201ENST00000555538 145 ntBASIC4.98□□□□□ -1.61
CCDC38Q502W7 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.98□□□□□ -1.61
CCDC38Q502W7 AC044860.2-201ENST00000561005 179 ntBASIC4.98□□□□□ -1.61
CCDC38Q502W7 AC009097.3-201ENST00000563557 1018 ntBASIC4.98□□□□□ -1.61
CCDC38Q502W7 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC4.98□□□□□ -1.61
CCDC38Q502W7 MIR4504-201ENST00000577413 92 ntBASIC4.98□□□□□ -1.61
CCDC38Q502W7 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.98□□□□□ -1.61
CCDC38Q502W7 AC061975.8-201ENST00000587058 721 ntBASIC4.98□□□□□ -1.61
CCDC38Q502W7 AC011447.4-201ENST00000587562 111 ntBASIC4.98□□□□□ -1.61
CCDC38Q502W7 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.98□□□□□ -1.61
CCDC38Q502W7 AC006116.3-201ENST00000592968 361 ntBASIC4.98□□□□□ -1.61
CCDC38Q502W7 AC087683.2-201ENST00000611384 326 ntBASIC4.98□□□□□ -1.61
CCDC38Q502W7 AC079395.3-201ENST00000615161 484 ntBASIC4.98□□□□□ -1.61
CCDC38Q502W7 AC098679.5-201ENST00000624394 571 ntBASIC4.98□□□□□ -1.61
CCDC38Q502W7 AP000676.4-201ENST00000624659 623 ntBASIC4.98□□□□□ -1.61
CCDC38Q502W7 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC38Q502W7 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.98□□□□□ -1.61
CCDC38Q502W7 AC022893.2-201ENST00000564832 3296 ntBASIC4.98□□□□□ -1.61
CCDC38Q502W7 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC38Q502W7 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC38Q502W7 THAP12P4-201ENST00000528321 2266 ntBASIC4.98□□□□□ -1.61
CCDC38Q502W7 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC38Q502W7 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC38Q502W7 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 166.2 ms