Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 RPL12P22-201ENST00000519073 490 ntBASIC3.41□□□□□ -1.86
CCDC58Q4VC31 AC022790.1-201ENST00000522872 204 ntBASIC3.41□□□□□ -1.86
CCDC58Q4VC31 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.41□□□□□ -1.86
CCDC58Q4VC31 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC58Q4VC31 OR4T1P-201ENST00000554933 911 ntBASIC3.41□□□□□ -1.86
CCDC58Q4VC31 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC58Q4VC31 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.41□□□□□ -1.86
CCDC58Q4VC31 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC58Q4VC31 MIR4738-201ENST00000579134 87 ntBASIC3.41□□□□□ -1.86
CCDC58Q4VC31 AL365400.2-201ENST00000605604 902 ntBASIC3.41□□□□□ -1.86
CCDC58Q4VC31 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC58Q4VC31 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.41□□□□□ -1.86
CCDC58Q4VC31 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC58Q4VC31 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC58Q4VC31 AC007256.1-201ENST00000392253 2765 ntBASIC3.4□□□□□ -1.86
CCDC58Q4VC31 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
CCDC58Q4VC31 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
CCDC58Q4VC31 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
CCDC58Q4VC31 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.4□□□□□ -1.87
CCDC58Q4VC31 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
CCDC58Q4VC31 RNU11-4P-201ENST00000391149 133 ntBASIC3.4□□□□□ -1.87
CCDC58Q4VC31 ENSAP1-201ENST00000392855 326 ntBASIC3.4□□□□□ -1.87
CCDC58Q4VC31 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
CCDC58Q4VC31 AL138878.2-201ENST00000440581 1241 ntBASIC3.4□□□□□ -1.87
CCDC58Q4VC31 OR2AF1P-201ENST00000454899 889 ntBASIC3.4□□□□□ -1.87
CCDC58Q4VC31 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CCDC58Q4VC31 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.4□□□□□ -1.87
CCDC58Q4VC31 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC3.4□□□□□ -1.87
CCDC58Q4VC31 AC091167.1-201ENST00000492017 396 ntBASIC3.4□□□□□ -1.87
CCDC58Q4VC31 AC078817.1-201ENST00000492623 435 ntBASIC3.4□□□□□ -1.87
CCDC58Q4VC31 AC108941.1-201ENST00000502853 530 ntBASIC3.4□□□□□ -1.87
CCDC58Q4VC31 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CCDC58Q4VC31 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC58Q4VC31 LECT2-205ENST00000522943 574 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC58Q4VC31 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC58Q4VC31 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CCDC58Q4VC31 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CCDC58Q4VC31 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC58Q4VC31 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC58Q4VC31 YPEL5P3-201ENST00000547227 352 ntBASIC3.4□□□□□ -1.87
CCDC58Q4VC31 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC58Q4VC31 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC58Q4VC31 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC58Q4VC31 AC011468.4-201ENST00000603942 409 ntBASIC3.4□□□□□ -1.87
CCDC58Q4VC31 AL356218.2-201ENST00000605264 187 ntBASIC3.4□□□□□ -1.87
CCDC58Q4VC31 AP001784.1-201ENST00000624107 428 ntBASIC3.4□□□□□ -1.87
CCDC58Q4VC31 MIR3653-201ENST00000625572 110 ntBASIC3.4□□□□□ -1.87
CCDC58Q4VC31 OR6C71P-202ENST00000641886 1107 ntBASIC3.4□□□□□ -1.87
CCDC58Q4VC31 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
CCDC58Q4VC31 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CCDC58Q4VC31 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.4□□□□□ -1.87
CCDC58Q4VC31 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
CCDC58Q4VC31 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.4□□□□□ -1.87
CCDC58Q4VC31 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
CCDC58Q4VC31 MTND5P27-201ENST00000428871 1720 ntBASIC3.39□□□□□ -1.87
CCDC58Q4VC31 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC58Q4VC31 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC58Q4VC31 RNA5SP509-201ENST00000364577 119 ntBASIC3.39□□□□□ -1.87
CCDC58Q4VC31 RNA5SP105-201ENST00000391123 113 ntBASIC3.39□□□□□ -1.87
CCDC58Q4VC31 RN7SKP33-201ENST00000410942 340 ntBASIC3.39□□□□□ -1.87
CCDC58Q4VC31 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC58Q4VC31 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.39□□□□□ -1.87
CCDC58Q4VC31 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC58Q4VC31 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.39□□□□□ -1.87
CCDC58Q4VC31 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
CCDC58Q4VC31 RPS11P1-201ENST00000451072 473 ntBASIC3.39□□□□□ -1.87
CCDC58Q4VC31 U3.44-201ENST00000458938 192 ntBASIC3.39□□□□□ -1.87
CCDC58Q4VC31 RPS27P29-201ENST00000463110 252 ntBASIC3.39□□□□□ -1.87
CCDC58Q4VC31 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
CCDC58Q4VC31 AC010627.1-201ENST00000503819 1294 ntBASIC3.39□□□□□ -1.87
CCDC58Q4VC31 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC58Q4VC31 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC58Q4VC31 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.39□□□□□ -1.87
CCDC58Q4VC31 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC58Q4VC31 NPM1P35-201ENST00000533043 868 ntBASIC3.39□□□□□ -1.87
CCDC58Q4VC31 KPNA2P3-201ENST00000584190 848 ntBASIC3.39□□□□□ -1.87
CCDC58Q4VC31 AC011477.5-201ENST00000586571 259 ntBASIC3.39□□□□□ -1.87
CCDC58Q4VC31 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.39□□□□□ -1.87
CCDC58Q4VC31 AP000894.4-201ENST00000610185 483 ntBASIC3.39□□□□□ -1.87
CCDC58Q4VC31 MIR6719-201ENST00000622428 87 ntBASIC3.39□□□□□ -1.87
CCDC58Q4VC31 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.39□□□□□ -1.87
CCDC58Q4VC31 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
CCDC58Q4VC31 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.38□□□□□ -1.87
CCDC58Q4VC31 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
CCDC58Q4VC31 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC58Q4VC31 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC58Q4VC31 AL513302.2-201ENST00000562313 1842 ntBASIC3.38□□□□□ -1.87
CCDC58Q4VC31 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC58Q4VC31 RNA5SP505-201ENST00000364748 108 ntBASIC3.38□□□□□ -1.87
CCDC58Q4VC31 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC58Q4VC31 AL139128.1-201ENST00000413921 941 ntBASIC3.38□□□□□ -1.87
CCDC58Q4VC31 RPS7P13-201ENST00000413955 498 ntBASIC3.38□□□□□ -1.87
CCDC58Q4VC31 MTND2P16-201ENST00000419987 799 ntBASIC3.38□□□□□ -1.87
CCDC58Q4VC31 TRIAP1P1-201ENST00000427062 225 ntBASIC3.38□□□□□ -1.87
CCDC58Q4VC31 AC023141.6-201ENST00000429418 337 ntBASIC3.38□□□□□ -1.87
CCDC58Q4VC31 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC3.38□□□□□ -1.87
CCDC58Q4VC31 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC58Q4VC31 AC092754.2-201ENST00000463506 460 ntBASIC3.38□□□□□ -1.87
CCDC58Q4VC31 AC011276.1-201ENST00000469688 323 ntBASIC3.38□□□□□ -1.87
CCDC58Q4VC31 UQCRHP4-201ENST00000471686 272 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms