Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
USP41Q3LFD5 MIR383-201ENST00000362257 73 ntBASIC4.71□□□□□ -1.66
USP41Q3LFD5 RNU6-236P-201ENST00000363886 106 ntBASIC4.71□□□□□ -1.66
USP41Q3LFD5 RNU6-304P-201ENST00000364855 107 ntBASIC4.71□□□□□ -1.66
USP41Q3LFD5 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
USP41Q3LFD5 RPS3AP25-201ENST00000411660 793 ntBASIC4.71□□□□□ -1.66
USP41Q3LFD5 MTND4P3-201ENST00000417829 541 ntBASIC4.71□□□□□ -1.66
USP41Q3LFD5 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.71□□□□□ -1.66
USP41Q3LFD5 AL139095.3-201ENST00000419672 1203 ntBASIC4.71□□□□□ -1.66
USP41Q3LFD5 RPL23AP38-201ENST00000423801 469 ntBASIC4.71□□□□□ -1.66
USP41Q3LFD5 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.71□□□□□ -1.66
USP41Q3LFD5 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.71□□□□□ -1.66
USP41Q3LFD5 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC4.71□□□□□ -1.66
USP41Q3LFD5 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.71□□□□□ -1.66
USP41Q3LFD5 OFD1P3Y-201ENST00000453312 783 ntBASIC4.71□□□□□ -1.66
USP41Q3LFD5 CDC42P1-201ENST00000456658 548 ntBASIC4.71□□□□□ -1.66
USP41Q3LFD5 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.71□□□□□ -1.66
USP41Q3LFD5 AC005912.1-201ENST00000495392 255 ntBASIC4.71□□□□□ -1.66
USP41Q3LFD5 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.71□□□□□ -1.66
USP41Q3LFD5 AC108475.1-201ENST00000507880 950 ntBASIC4.71□□□□□ -1.66
USP41Q3LFD5 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.71□□□□□ -1.66
USP41Q3LFD5 AC093824.1-201ENST00000508796 343 ntBASIC4.71□□□□□ -1.66
USP41Q3LFD5 RNU6-347P-201ENST00000516658 105 ntBASIC4.71□□□□□ -1.66
USP41Q3LFD5 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC4.71□□□□□ -1.66
USP41Q3LFD5 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.71□□□□□ -1.66
USP41Q3LFD5 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.71□□□□□ -1.66
USP41Q3LFD5 TRAV8-5-201ENST00000537369 341 ntBASIC4.71□□□□□ -1.66
USP41Q3LFD5 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.71□□□□□ -1.66
USP41Q3LFD5 AL132857.1-201ENST00000555180 708 ntBASIC4.71□□□□□ -1.66
USP41Q3LFD5 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.71□□□□□ -1.66
USP41Q3LFD5 AL158211.1-201ENST00000566763 763 ntBASIC4.71□□□□□ -1.66
USP41Q3LFD5 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC4.71□□□□□ -1.66
USP41Q3LFD5 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.71□□□□□ -1.66
USP41Q3LFD5 AC096553.1-201ENST00000605169 829 ntBASIC4.71□□□□□ -1.66
USP41Q3LFD5 AC024941.1-201ENST00000612250 334 ntBASIC4.71□□□□□ -1.66
USP41Q3LFD5 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
USP41Q3LFD5 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
USP41Q3LFD5 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
USP41Q3LFD5 AC068254.2-201ENST00000623938 3577 ntBASIC4.71□□□□□ -1.66
USP41Q3LFD5 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
USP41Q3LFD5 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
USP41Q3LFD5 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.71□□□□□ -1.66
USP41Q3LFD5 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
USP41Q3LFD5 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
USP41Q3LFD5 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.7□□□□□ -1.66
USP41Q3LFD5 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
USP41Q3LFD5 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.7□□□□□ -1.66
USP41Q3LFD5 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
USP41Q3LFD5 AC096656.1-201ENST00000623826 1364 ntBASIC4.7□□□□□ -1.66
USP41Q3LFD5 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.7□□□□□ -1.66
USP41Q3LFD5 NEAT1-202ENST00000501122 22743 ntBASIC4.7□□□□□ -1.66
USP41Q3LFD5 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
USP41Q3LFD5 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.7□□□□□ -1.66
USP41Q3LFD5 RNU1-108P-201ENST00000362556 161 ntBASIC4.7□□□□□ -1.66
USP41Q3LFD5 RN7SKP224-201ENST00000364140 325 ntBASIC4.7□□□□□ -1.66
USP41Q3LFD5 RNU6-353P-201ENST00000364266 108 ntBASIC4.7□□□□□ -1.66
USP41Q3LFD5 ATP5F1P2-201ENST00000398143 760 ntBASIC4.7□□□□□ -1.66
USP41Q3LFD5 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
USP41Q3LFD5 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.7□□□□□ -1.66
USP41Q3LFD5 CEACAMP8-201ENST00000413902 580 ntBASIC4.7□□□□□ -1.66
USP41Q3LFD5 TRIM60P5Y-201ENST00000413946 574 ntBASIC4.7□□□□□ -1.66
USP41Q3LFD5 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.7□□□□□ -1.66
USP41Q3LFD5 AC099336.2-201ENST00000422457 254 ntBASIC4.7□□□□□ -1.66
USP41Q3LFD5 NANOGP5-201ENST00000424456 877 ntBASIC4.7□□□□□ -1.66
USP41Q3LFD5 GTF2IP3-201ENST00000433887 494 ntBASIC4.7□□□□□ -1.66
USP41Q3LFD5 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.7□□□□□ -1.66
USP41Q3LFD5 HMGB1P45-201ENST00000435986 653 ntBASIC4.7□□□□□ -1.66
USP41Q3LFD5 PTGES3P1-201ENST00000439531 483 ntBASIC4.7□□□□□ -1.66
USP41Q3LFD5 AC114495.1-201ENST00000441274 436 ntBASIC4.7□□□□□ -1.66
USP41Q3LFD5 TDGF1P1-201ENST00000445734 527 ntBASIC4.7□□□□□ -1.66
USP41Q3LFD5 AL929288.2-201ENST00000446368 407 ntBASIC4.7□□□□□ -1.66
USP41Q3LFD5 AC099560.2-201ENST00000457554 255 ntBASIC4.7□□□□□ -1.66
USP41Q3LFD5 AC079203.1-201ENST00000487972 404 ntBASIC4.7□□□□□ -1.66
USP41Q3LFD5 RN7SL812P-201ENST00000493791 279 ntBASIC4.7□□□□□ -1.66
USP41Q3LFD5 AL035404.1-201ENST00000497982 568 ntBASIC4.7□□□□□ -1.66
USP41Q3LFD5 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.7□□□□□ -1.66
USP41Q3LFD5 AC010627.1-201ENST00000503819 1294 ntBASIC4.7□□□□□ -1.66
USP41Q3LFD5 AC113430.1-201ENST00000506872 718 ntBASIC4.7□□□□□ -1.66
USP41Q3LFD5 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.7□□□□□ -1.66
USP41Q3LFD5 AC119751.1-201ENST00000513357 765 ntBASIC4.7□□□□□ -1.66
USP41Q3LFD5 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.7□□□□□ -1.66
USP41Q3LFD5 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.7□□□□□ -1.66
USP41Q3LFD5 AC091178.1-203ENST00000584586 279 ntBASIC4.7□□□□□ -1.66
USP41Q3LFD5 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.7□□□□□ -1.66
USP41Q3LFD5 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.7□□□□□ -1.66
USP41Q3LFD5 VN1R85P-201ENST00000601587 426 ntBASIC4.7□□□□□ -1.66
USP41Q3LFD5 AC009948.4-201ENST00000604692 675 ntBASIC4.7□□□□□ -1.66
USP41Q3LFD5 BNIP3P4-201ENST00000604946 565 ntBASIC4.7□□□□□ -1.66
USP41Q3LFD5 RNU4-5P-201ENST00000607255 135 ntBASIC4.7□□□□□ -1.66
USP41Q3LFD5 AP000770.2-201ENST00000623694 100 ntBASIC4.7□□□□□ -1.66
USP41Q3LFD5 ATE1-AS1-202ENST00000636460 506 ntBASIC4.7□□□□□ -1.66
USP41Q3LFD5 MIR492-201ENST00000638676 116 ntBASIC4.7□□□□□ -1.66
USP41Q3LFD5 BX649567.1-201ENST00000642071 1134 ntBASIC4.7□□□□□ -1.66
USP41Q3LFD5 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.7□□□□□ -1.66
USP41Q3LFD5 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
USP41Q3LFD5 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.7□□□□□ -1.66
USP41Q3LFD5 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.7□□□□□ -1.66
USP41Q3LFD5 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.7□□□□□ -1.66
USP41Q3LFD5 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.7□□□□□ -1.66
USP41Q3LFD5 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms