Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 AL731566.1-201ENST00000620490 1937 ntBASIC6.96□□□□□ -1.3
CTC1Q2NKJ3 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC6.96□□□□□ -1.3
CTC1Q2NKJ3 VTRNA3-1P-201ENST00000362552 102 ntBASIC6.96□□□□□ -1.3
CTC1Q2NKJ3 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
CTC1Q2NKJ3 RN7SKP271-201ENST00000410528 320 ntBASIC6.96□□□□□ -1.3
CTC1Q2NKJ3 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CTC1Q2NKJ3 AL450992.3-201ENST00000413192 568 ntBASIC6.96□□□□□ -1.3
CTC1Q2NKJ3 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.96□□□□□ -1.3
CTC1Q2NKJ3 AL034379.1-201ENST00000423216 253 ntBASIC6.96□□□□□ -1.3
CTC1Q2NKJ3 RPL23AP19-201ENST00000436229 369 ntBASIC6.96□□□□□ -1.3
CTC1Q2NKJ3 DYNLT3P2-201ENST00000442517 295 ntBASIC6.96□□□□□ -1.3
CTC1Q2NKJ3 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.96□□□□□ -1.3
CTC1Q2NKJ3 MGAT2P1-201ENST00000449718 797 ntBASIC6.96□□□□□ -1.3
CTC1Q2NKJ3 NXT1P1-201ENST00000458481 316 ntBASIC6.96□□□□□ -1.3
CTC1Q2NKJ3 AL163973.1-201ENST00000484753 577 ntBASIC6.96□□□□□ -1.3
CTC1Q2NKJ3 AC058823.1-201ENST00000485315 474 ntBASIC6.96□□□□□ -1.3
CTC1Q2NKJ3 AP002453.1-201ENST00000492327 668 ntBASIC6.96□□□□□ -1.3
CTC1Q2NKJ3 FTH1P8-201ENST00000498161 514 ntBASIC6.96□□□□□ -1.3
CTC1Q2NKJ3 SLC25A15P5-201ENST00000508033 253 ntBASIC6.96□□□□□ -1.3
CTC1Q2NKJ3 RNU6-583P-201ENST00000516012 92 ntBASIC6.96□□□□□ -1.3
CTC1Q2NKJ3 RNU6-1023P-201ENST00000516137 106 ntBASIC6.96□□□□□ -1.3
CTC1Q2NKJ3 SCARNA5-201ENST00000516201 276 ntBASIC6.96□□□□□ -1.3
CTC1Q2NKJ3 RNU6-1261P-201ENST00000517194 104 ntBASIC6.96□□□□□ -1.3
CTC1Q2NKJ3 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CTC1Q2NKJ3 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC6.96□□□□□ -1.3
CTC1Q2NKJ3 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC6.96□□□□□ -1.3
CTC1Q2NKJ3 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC6.96□□□□□ -1.3
CTC1Q2NKJ3 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.96□□□□□ -1.3
CTC1Q2NKJ3 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC6.96□□□□□ -1.3
CTC1Q2NKJ3 AC010201.1-201ENST00000605051 540 ntBASIC6.96□□□□□ -1.3
CTC1Q2NKJ3 RPSAP75-201ENST00000605848 301 ntBASIC6.96□□□□□ -1.3
CTC1Q2NKJ3 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC6.96□□□□□ -1.3
CTC1Q2NKJ3 AC131009.3-201ENST00000621809 287 ntBASIC6.96□□□□□ -1.3
CTC1Q2NKJ3 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.96□□□□□ -1.3
CTC1Q2NKJ3 AC006213.6-201ENST00000623722 4179 ntBASIC6.96□□□□□ -1.3
CTC1Q2NKJ3 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.96□□□□□ -1.3
CTC1Q2NKJ3 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
CTC1Q2NKJ3 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC6.96□□□□□ -1.3
CTC1Q2NKJ3 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
CTC1Q2NKJ3 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CTC1Q2NKJ3 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
CTC1Q2NKJ3 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC6.96□□□□□ -1.3
CTC1Q2NKJ3 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
CTC1Q2NKJ3 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
CTC1Q2NKJ3 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC6.96□□□□□ -1.3
CTC1Q2NKJ3 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC6.96□□□□□ -1.3
CTC1Q2NKJ3 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC6.95□□□□□ -1.3
CTC1Q2NKJ3 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CTC1Q2NKJ3 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CTC1Q2NKJ3 TATDN2P3-201ENST00000452855 3665 ntBASIC6.95□□□□□ -1.3
CTC1Q2NKJ3 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
CTC1Q2NKJ3 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC6.95□□□□□ -1.3
CTC1Q2NKJ3 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CTC1Q2NKJ3 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC6.95□□□□□ -1.3
CTC1Q2NKJ3 Y_RNA.252-201ENST00000364556 101 ntBASIC6.95□□□□□ -1.3
CTC1Q2NKJ3 Y_RNA.270-201ENST00000364693 104 ntBASIC6.95□□□□□ -1.3
CTC1Q2NKJ3 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
CTC1Q2NKJ3 Y_RNA.414-201ENST00000384011 101 ntBASIC6.95□□□□□ -1.3
CTC1Q2NKJ3 Y_RNA.461-201ENST00000384263 103 ntBASIC6.95□□□□□ -1.3
CTC1Q2NKJ3 Y_RNA.463-201ENST00000384271 102 ntBASIC6.95□□□□□ -1.3
CTC1Q2NKJ3 MIR1-2-201ENST00000384961 85 ntBASIC6.95□□□□□ -1.3
CTC1Q2NKJ3 MIR514A2-201ENST00000385131 88 ntBASIC6.95□□□□□ -1.3
CTC1Q2NKJ3 MIR514A3-201ENST00000385132 88 ntBASIC6.95□□□□□ -1.3
CTC1Q2NKJ3 SSXP10-201ENST00000402595 565 ntBASIC6.95□□□□□ -1.3
CTC1Q2NKJ3 MIR320C1-201ENST00000408566 88 ntBASIC6.95□□□□□ -1.3
CTC1Q2NKJ3 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC6.95□□□□□ -1.3
CTC1Q2NKJ3 RNU2-38P-201ENST00000410856 79 ntBASIC6.95□□□□□ -1.3
CTC1Q2NKJ3 Y_RNA.646-201ENST00000410980 101 ntBASIC6.95□□□□□ -1.3
CTC1Q2NKJ3 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC6.95□□□□□ -1.3
CTC1Q2NKJ3 AL663061.1-201ENST00000416625 580 ntBASIC6.95□□□□□ -1.3
CTC1Q2NKJ3 PGBD4P6-201ENST00000421501 610 ntBASIC6.95□□□□□ -1.3
CTC1Q2NKJ3 RGS17P1-201ENST00000423358 553 ntBASIC6.95□□□□□ -1.3
CTC1Q2NKJ3 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC6.95□□□□□ -1.3
CTC1Q2NKJ3 AC003989.1-201ENST00000434569 565 ntBASIC6.95□□□□□ -1.3
CTC1Q2NKJ3 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC6.95□□□□□ -1.3
CTC1Q2NKJ3 AC105399.1-202ENST00000447303 205 ntBASIC6.95□□□□□ -1.3
CTC1Q2NKJ3 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC6.95□□□□□ -1.3
CTC1Q2NKJ3 SNORD127-201ENST00000458892 86 ntBASIC6.95□□□□□ -1.3
CTC1Q2NKJ3 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
CTC1Q2NKJ3 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.95□□□□□ -1.3
CTC1Q2NKJ3 RPL21P99-201ENST00000480369 423 ntBASIC6.95□□□□□ -1.3
CTC1Q2NKJ3 AC104687.1-201ENST00000485829 412 ntBASIC6.95□□□□□ -1.3
CTC1Q2NKJ3 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC6.95□□□□□ -1.3
CTC1Q2NKJ3 RNU4-29P-201ENST00000515943 174 ntBASIC6.95□□□□□ -1.3
CTC1Q2NKJ3 RNA5SP418-201ENST00000515951 117 ntBASIC6.95□□□□□ -1.3
CTC1Q2NKJ3 Y_RNA.703-201ENST00000516846 111 ntBASIC6.95□□□□□ -1.3
CTC1Q2NKJ3 RNU6-1003P-201ENST00000517099 105 ntBASIC6.95□□□□□ -1.3
CTC1Q2NKJ3 RNU6-1220P-201ENST00000517126 108 ntBASIC6.95□□□□□ -1.3
CTC1Q2NKJ3 AC027308.1-201ENST00000517993 110 ntBASIC6.95□□□□□ -1.3
CTC1Q2NKJ3 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC6.95□□□□□ -1.3
CTC1Q2NKJ3 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC6.95□□□□□ -1.3
CTC1Q2NKJ3 OR4R1P-201ENST00000529879 463 ntBASIC6.95□□□□□ -1.3
CTC1Q2NKJ3 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC6.95□□□□□ -1.3
CTC1Q2NKJ3 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CTC1Q2NKJ3 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC6.95□□□□□ -1.3
CTC1Q2NKJ3 AP003115.1-201ENST00000569849 463 ntBASIC6.95□□□□□ -1.3
CTC1Q2NKJ3 MIR4790-201ENST00000577799 79 ntBASIC6.95□□□□□ -1.3
CTC1Q2NKJ3 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC6.95□□□□□ -1.3
CTC1Q2NKJ3 AL670379.11-201ENST00000604059 253 ntBASIC6.95□□□□□ -1.3
CTC1Q2NKJ3 AL670379.10-201ENST00000604330 253 ntBASIC6.95□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms