Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AC020914.4-201ENST00000597690 277 ntBASIC3.73□□□□□ -1.81
HMGCS1Q01581 MTCO2P22-201ENST00000603246 681 ntBASIC3.73□□□□□ -1.81
HMGCS1Q01581 AC007423.1-201ENST00000605009 627 ntBASIC3.73□□□□□ -1.81
HMGCS1Q01581 BRDTP1-201ENST00000605735 677 ntBASIC3.73□□□□□ -1.81
HMGCS1Q01581 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.73□□□□□ -1.81
HMGCS1Q01581 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.73□□□□□ -1.81
HMGCS1Q01581 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC3.73□□□□□ -1.81
HMGCS1Q01581 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
HMGCS1Q01581 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC3.73□□□□□ -1.81
HMGCS1Q01581 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC3.73□□□□□ -1.81
HMGCS1Q01581 ATE1-AS1-202ENST00000636460 506 ntBASIC3.73□□□□□ -1.81
HMGCS1Q01581 AC017002.4-201ENST00000604721 1525 ntBASIC3.73□□□□□ -1.81
HMGCS1Q01581 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
HMGCS1Q01581 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.73□□□□□ -1.81
HMGCS1Q01581 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.73□□□□□ -1.81
HMGCS1Q01581 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.72□□□□□ -1.81
HMGCS1Q01581 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.72□□□□□ -1.81
HMGCS1Q01581 MFSD8-220ENST00000641243 1422 ntBASIC3.72□□□□□ -1.81
HMGCS1Q01581 AC008725.1-201ENST00000605123 2263 ntBASIC3.72□□□□□ -1.81
HMGCS1Q01581 SPRR2C-201ENST00000290702 219 ntBASIC3.72□□□□□ -1.81
HMGCS1Q01581 RN7SKP227-201ENST00000364445 330 ntBASIC3.72□□□□□ -1.81
HMGCS1Q01581 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HMGCS1Q01581 HMGN2P8-201ENST00000391458 268 ntBASIC3.72□□□□□ -1.81
HMGCS1Q01581 NPM1P10-201ENST00000398310 865 ntBASIC3.72□□□□□ -1.81
HMGCS1Q01581 RPL31P52-201ENST00000407532 367 ntBASIC3.72□□□□□ -1.81
HMGCS1Q01581 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.72□□□□□ -1.81
HMGCS1Q01581 NPM1P24-201ENST00000428039 894 ntBASIC3.72□□□□□ -1.81
HMGCS1Q01581 IFNNP1-201ENST00000429219 553 ntBASIC3.72□□□□□ -1.81
HMGCS1Q01581 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.72□□□□□ -1.81
HMGCS1Q01581 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HMGCS1Q01581 HMGB1P16-201ENST00000447155 540 ntBASIC3.72□□□□□ -1.81
HMGCS1Q01581 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC3.72□□□□□ -1.81
HMGCS1Q01581 AP002345.1-201ENST00000456493 928 ntBASIC3.72□□□□□ -1.81
HMGCS1Q01581 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC3.72□□□□□ -1.81
HMGCS1Q01581 AC068587.1-201ENST00000483613 781 ntBASIC3.72□□□□□ -1.81
HMGCS1Q01581 RPS4XP15-201ENST00000489210 795 ntBASIC3.72□□□□□ -1.81
HMGCS1Q01581 TRBV12-2-201ENST00000489763 344 ntBASIC3.72□□□□□ -1.81
HMGCS1Q01581 AC110792.1-201ENST00000491826 472 ntBASIC3.72□□□□□ -1.81
HMGCS1Q01581 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC3.72□□□□□ -1.81
HMGCS1Q01581 AC021087.2-201ENST00000504656 1203 ntBASIC3.72□□□□□ -1.81
HMGCS1Q01581 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.72□□□□□ -1.81
HMGCS1Q01581 ACTR6P1-201ENST00000514311 1104 ntBASIC3.72□□□□□ -1.81
HMGCS1Q01581 AC034244.2-201ENST00000514668 858 ntBASIC3.72□□□□□ -1.81
HMGCS1Q01581 NDUFA5P2-201ENST00000519723 344 ntBASIC3.72□□□□□ -1.81
HMGCS1Q01581 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HMGCS1Q01581 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.72□□□□□ -1.81
HMGCS1Q01581 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.72□□□□□ -1.81
HMGCS1Q01581 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.72□□□□□ -1.81
HMGCS1Q01581 NPM1P47-201ENST00000560843 856 ntBASIC3.72□□□□□ -1.81
HMGCS1Q01581 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC3.72□□□□□ -1.81
HMGCS1Q01581 MIR4512-201ENST00000583257 77 ntBASIC3.72□□□□□ -1.81
HMGCS1Q01581 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC3.72□□□□□ -1.81
HMGCS1Q01581 EIF1P6-201ENST00000600054 334 ntBASIC3.72□□□□□ -1.81
HMGCS1Q01581 AL390816.3-201ENST00000604527 1066 ntBASIC3.72□□□□□ -1.81
HMGCS1Q01581 AL096803.3-201ENST00000609032 532 ntBASIC3.72□□□□□ -1.81
HMGCS1Q01581 MIR6798-201ENST00000612887 67 ntBASIC3.72□□□□□ -1.81
HMGCS1Q01581 uc_338.9-201ENST00000617424 182 ntBASIC3.72□□□□□ -1.81
HMGCS1Q01581 ZYXP1-201ENST00000617638 118 ntBASIC3.72□□□□□ -1.81
HMGCS1Q01581 RMST_9.1-201ENST00000619945 193 ntBASIC3.72□□□□□ -1.81
HMGCS1Q01581 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.72□□□□□ -1.81
HMGCS1Q01581 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HMGCS1Q01581 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.72□□□□□ -1.81
HMGCS1Q01581 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HMGCS1Q01581 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HMGCS1Q01581 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.72□□□□□ -1.81
HMGCS1Q01581 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
HMGCS1Q01581 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.81
HMGCS1Q01581 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
HMGCS1Q01581 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
HMGCS1Q01581 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
HMGCS1Q01581 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
HMGCS1Q01581 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
HMGCS1Q01581 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.71□□□□□ -1.82
HMGCS1Q01581 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
HMGCS1Q01581 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
HMGCS1Q01581 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
HMGCS1Q01581 HLFP1-201ENST00000402375 499 ntBASIC3.71□□□□□ -1.82
HMGCS1Q01581 GSTA12P-201ENST00000402398 508 ntBASIC3.71□□□□□ -1.82
HMGCS1Q01581 RPL21P65-201ENST00000406094 466 ntBASIC3.71□□□□□ -1.82
HMGCS1Q01581 MTND3P20-201ENST00000407663 186 ntBASIC3.71□□□□□ -1.82
HMGCS1Q01581 RNA5SP239-201ENST00000410218 129 ntBASIC3.71□□□□□ -1.82
HMGCS1Q01581 RAC1P3-201ENST00000416129 580 ntBASIC3.71□□□□□ -1.82
HMGCS1Q01581 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HMGCS1Q01581 Z97055.1-201ENST00000419730 712 ntBASIC3.71□□□□□ -1.82
HMGCS1Q01581 AC009965.2-201ENST00000425328 970 ntBASIC3.71□□□□□ -1.82
HMGCS1Q01581 AL445528.1-201ENST00000426330 420 ntBASIC3.71□□□□□ -1.82
HMGCS1Q01581 EIF2S2P3-201ENST00000428356 999 ntBASIC3.71□□□□□ -1.82
HMGCS1Q01581 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.71□□□□□ -1.82
HMGCS1Q01581 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.71□□□□□ -1.82
HMGCS1Q01581 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.71□□□□□ -1.82
HMGCS1Q01581 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.71□□□□□ -1.82
HMGCS1Q01581 AC092809.1-201ENST00000441469 474 ntBASIC3.71□□□□□ -1.82
HMGCS1Q01581 AL353898.1-201ENST00000444055 238 ntBASIC3.71□□□□□ -1.82
HMGCS1Q01581 HSFY6P-201ENST00000445573 403 ntBASIC3.71□□□□□ -1.82
HMGCS1Q01581 HGF-207ENST00000453018 721 ntTSL 3 BASIC3.71□□□□□ -1.82
HMGCS1Q01581 AC093267.1-201ENST00000489176 961 ntBASIC3.71□□□□□ -1.82
HMGCS1Q01581 RNU6-760P-201ENST00000516078 97 ntBASIC3.71□□□□□ -1.82
HMGCS1Q01581 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.71□□□□□ -1.82
HMGCS1Q01581 NARSP2-201ENST00000518524 679 ntBASIC3.71□□□□□ -1.82
HMGCS1Q01581 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms