Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CDK3Q00526 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
CDK3Q00526 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CDK3Q00526 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CDK3Q00526 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CDK3Q00526 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CDK3Q00526 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.32□□□□□ -1.72
CDK3Q00526 AC114546.3-201ENST00000623582 1734 ntBASIC4.32□□□□□ -1.72
CDK3Q00526 AC000123.3-201ENST00000624029 4975 ntBASIC4.32□□□□□ -1.72
CDK3Q00526 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC4.32□□□□□ -1.72
CDK3Q00526 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.32□□□□□ -1.72
CDK3Q00526 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.32□□□□□ -1.72
CDK3Q00526 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CDK3Q00526 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CDK3Q00526 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.32□□□□□ -1.72
CDK3Q00526 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.32□□□□□ -1.72
CDK3Q00526 AL512646.1-201ENST00000269395 1077 ntBASIC4.32□□□□□ -1.72
CDK3Q00526 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CDK3Q00526 RNA5SP366-201ENST00000365454 123 ntBASIC4.32□□□□□ -1.72
CDK3Q00526 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.32□□□□□ -1.72
CDK3Q00526 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
CDK3Q00526 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
CDK3Q00526 RNU6-224P-201ENST00000384055 107 ntBASIC4.32□□□□□ -1.72
CDK3Q00526 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CDK3Q00526 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.32□□□□□ -1.72
CDK3Q00526 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.32□□□□□ -1.72
CDK3Q00526 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CDK3Q00526 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC4.32□□□□□ -1.72
CDK3Q00526 C1DP1-201ENST00000426049 402 ntBASIC4.32□□□□□ -1.72
CDK3Q00526 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.32□□□□□ -1.72
CDK3Q00526 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CDK3Q00526 AC004865.1-201ENST00000442276 1003 ntBASIC4.32□□□□□ -1.72
CDK3Q00526 AL589765.3-201ENST00000446084 462 ntBASIC4.32□□□□□ -1.72
CDK3Q00526 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.32□□□□□ -1.72
CDK3Q00526 AL031313.1-201ENST00000448435 256 ntBASIC4.32□□□□□ -1.72
CDK3Q00526 AC010618.1-201ENST00000469924 477 ntBASIC4.32□□□□□ -1.72
CDK3Q00526 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.32□□□□□ -1.72
CDK3Q00526 AC108022.1-201ENST00000493466 478 ntBASIC4.32□□□□□ -1.72
CDK3Q00526 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC4.32□□□□□ -1.72
CDK3Q00526 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.32□□□□□ -1.72
CDK3Q00526 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC4.32□□□□□ -1.72
CDK3Q00526 AC110760.3-202ENST00000515177 371 ntBASIC4.32□□□□□ -1.72
CDK3Q00526 OR4U1P-201ENST00000554958 912 ntBASIC4.32□□□□□ -1.72
CDK3Q00526 PARP1P2-201ENST00000556806 195 ntBASIC4.32□□□□□ -1.72
CDK3Q00526 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CDK3Q00526 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC4.32□□□□□ -1.72
CDK3Q00526 MTND1P8-201ENST00000571424 950 ntBASIC4.32□□□□□ -1.72
CDK3Q00526 MIR3939-201ENST00000582614 106 ntBASIC4.32□□□□□ -1.72
CDK3Q00526 AC069366.1-201ENST00000583159 838 ntBASIC4.32□□□□□ -1.72
CDK3Q00526 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.32□□□□□ -1.72
CDK3Q00526 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CDK3Q00526 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.32□□□□□ -1.72
CDK3Q00526 IPO5P1-202ENST00000600039 287 ntBASIC4.32□□□□□ -1.72
CDK3Q00526 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.32□□□□□ -1.72
CDK3Q00526 AL160237.3-201ENST00000604114 1013 ntBASIC4.32□□□□□ -1.72
CDK3Q00526 AL590392.1-201ENST00000604960 446 ntBASIC4.32□□□□□ -1.72
CDK3Q00526 AC024060.1-201ENST00000607052 494 ntBASIC4.32□□□□□ -1.72
CDK3Q00526 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.32□□□□□ -1.72
CDK3Q00526 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.32□□□□□ -1.72
CDK3Q00526 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CDK3Q00526 AL109659.3-201ENST00000624985 950 ntBASIC4.32□□□□□ -1.72
CDK3Q00526 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC4.32□□□□□ -1.72
CDK3Q00526 OR52H1-202ENST00000641796 1061 ntBASIC4.32□□□□□ -1.72
CDK3Q00526 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CDK3Q00526 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CDK3Q00526 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CDK3Q00526 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CDK3Q00526 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
CDK3Q00526 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.32□□□□□ -1.72
CDK3Q00526 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CDK3Q00526 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CDK3Q00526 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CDK3Q00526 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
CDK3Q00526 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC4.31□□□□□ -1.72
CDK3Q00526 AC015813.6-201ENST00000624409 5808 ntBASIC4.31□□□□□ -1.72
CDK3Q00526 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.31□□□□□ -1.72
CDK3Q00526 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.31□□□□□ -1.72
CDK3Q00526 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CDK3Q00526 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CDK3Q00526 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CDK3Q00526 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.31□□□□□ -1.72
CDK3Q00526 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CDK3Q00526 RNU1-132P-201ENST00000364300 164 ntBASIC4.31□□□□□ -1.72
CDK3Q00526 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
CDK3Q00526 OR1L1-202ENST00000373686 1083 ntBASIC4.31□□□□□ -1.72
CDK3Q00526 AC097374.1-203ENST00000400783 485 ntBASIC4.31□□□□□ -1.72
CDK3Q00526 RNU6-272P-201ENST00000411028 104 ntBASIC4.31□□□□□ -1.72
CDK3Q00526 RPL23AP26-201ENST00000412728 464 ntBASIC4.31□□□□□ -1.72
CDK3Q00526 VDAC1P9-201ENST00000412766 841 ntBASIC4.31□□□□□ -1.72
CDK3Q00526 AL132765.1-201ENST00000434165 553 ntBASIC4.31□□□□□ -1.72
CDK3Q00526 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.31□□□□□ -1.72
CDK3Q00526 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC4.31□□□□□ -1.72
CDK3Q00526 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.31□□□□□ -1.72
CDK3Q00526 AL009048.1-201ENST00000450437 298 ntBASIC4.31□□□□□ -1.72
CDK3Q00526 AC233982.1-201ENST00000451247 436 ntBASIC4.31□□□□□ -1.72
CDK3Q00526 NPM1P13-201ENST00000452663 865 ntBASIC4.31□□□□□ -1.72
CDK3Q00526 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.31□□□□□ -1.72
CDK3Q00526 RPL35AP15-201ENST00000468042 339 ntBASIC4.31□□□□□ -1.72
CDK3Q00526 AC104689.1-201ENST00000473356 768 ntBASIC4.31□□□□□ -1.72
CDK3Q00526 RPS27P23-201ENST00000487608 251 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms