Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 HMGB1P42-201ENST00000532126 553 ntBASIC5.51□□□□□ -1.53
YBX1P67809 AL121594.2-201ENST00000541658 472 ntBASIC5.51□□□□□ -1.53
YBX1P67809 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.51□□□□□ -1.53
YBX1P67809 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.51□□□□□ -1.53
YBX1P67809 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.51□□□□□ -1.53
YBX1P67809 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC5.51□□□□□ -1.53
YBX1P67809 AC015917.1-201ENST00000579654 510 ntBASIC5.51□□□□□ -1.53
YBX1P67809 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC5.51□□□□□ -1.53
YBX1P67809 BNIP3P23-201ENST00000599655 511 ntBASIC5.51□□□□□ -1.53
YBX1P67809 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
YBX1P67809 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.51□□□□□ -1.53
YBX1P67809 AC018695.5-201ENST00000605872 315 ntBASIC5.51□□□□□ -1.53
YBX1P67809 Z98200.1-201ENST00000607298 470 ntBASIC5.51□□□□□ -1.53
YBX1P67809 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC5.51□□□□□ -1.53
YBX1P67809 Z95327.3-201ENST00000610385 572 ntBASIC5.51□□□□□ -1.53
YBX1P67809 AC008115.3-201ENST00000614874 549 ntBASIC5.51□□□□□ -1.53
YBX1P67809 AC015871.5-202ENST00000623252 701 ntBASIC5.51□□□□□ -1.53
YBX1P67809 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
YBX1P67809 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.51□□□□□ -1.53
YBX1P67809 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC5.51□□□□□ -1.53
YBX1P67809 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
YBX1P67809 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.51□□□□□ -1.53
YBX1P67809 DNM1P47-203ENST00000571780 12667 ntBASIC5.51□□□□□ -1.53
YBX1P67809 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
YBX1P67809 AC009962.1-201ENST00000567327 3813 ntBASIC5.51□□□□□ -1.53
YBX1P67809 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
YBX1P67809 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.51□□□□□ -1.53
YBX1P67809 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.51□□□□□ -1.53
YBX1P67809 AL121950.1-201ENST00000624993 2077 ntBASIC5.51□□□□□ -1.53
YBX1P67809 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
YBX1P67809 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
YBX1P67809 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
YBX1P67809 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
YBX1P67809 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.5□□□□□ -1.53
YBX1P67809 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.5□□□□□ -1.53
YBX1P67809 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
YBX1P67809 AC021242.1-201ENST00000507315 2035 ntBASIC5.5□□□□□ -1.53
YBX1P67809 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.5□□□□□ -1.53
YBX1P67809 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
YBX1P67809 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.5□□□□□ -1.53
YBX1P67809 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
YBX1P67809 FARSBP1-201ENST00000435808 1778 ntBASIC5.5□□□□□ -1.53
YBX1P67809 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.5□□□□□ -1.53
YBX1P67809 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
YBX1P67809 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
YBX1P67809 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.5□□□□□ -1.53
YBX1P67809 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
YBX1P67809 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.5□□□□□ -1.53
YBX1P67809 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
YBX1P67809 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
YBX1P67809 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.5□□□□□ -1.53
YBX1P67809 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
YBX1P67809 PROS2P-201ENST00000474651 1951 ntBASIC5.5□□□□□ -1.53
YBX1P67809 UGT2B26P-201ENST00000508672 1613 ntBASIC5.5□□□□□ -1.53
YBX1P67809 RNU6-582P-201ENST00000362989 107 ntBASIC5.5□□□□□ -1.53
YBX1P67809 Y_RNA.86-201ENST00000363020 111 ntBASIC5.5□□□□□ -1.53
YBX1P67809 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
YBX1P67809 SUGT1P1-201ENST00000379514 476 ntBASIC5.5□□□□□ -1.53
YBX1P67809 RNU6-533P-201ENST00000384144 107 ntBASIC5.5□□□□□ -1.53
YBX1P67809 MIR137-201ENST00000385223 102 ntBASIC5.5□□□□□ -1.53
YBX1P67809 AC104297.1-201ENST00000393779 870 ntBASIC5.5□□□□□ -1.53
YBX1P67809 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.5□□□□□ -1.53
YBX1P67809 TMBIM7P-201ENST00000418074 855 ntBASIC5.5□□□□□ -1.53
YBX1P67809 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC5.5□□□□□ -1.53
YBX1P67809 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.5□□□□□ -1.53
YBX1P67809 AC093155.2-201ENST00000420734 937 ntBASIC5.5□□□□□ -1.53
YBX1P67809 BX890604.2-201ENST00000427883 474 ntBASIC5.5□□□□□ -1.53
YBX1P67809 AC002486.1-201ENST00000435098 391 ntBASIC5.5□□□□□ -1.53
YBX1P67809 RPL7P11-201ENST00000437586 658 ntBASIC5.5□□□□□ -1.53
YBX1P67809 UBE2V1P5-201ENST00000440070 405 ntBASIC5.5□□□□□ -1.53
YBX1P67809 AP000281.1-201ENST00000444036 316 ntBASIC5.5□□□□□ -1.53
YBX1P67809 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.5□□□□□ -1.53
YBX1P67809 YWHAQP9-201ENST00000445891 512 ntBASIC5.5□□□□□ -1.53
YBX1P67809 SNRPGP6-201ENST00000451124 220 ntBASIC5.5□□□□□ -1.53
YBX1P67809 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC5.5□□□□□ -1.53
YBX1P67809 AL445665.1-202ENST00000452436 324 ntBASIC5.5□□□□□ -1.53
YBX1P67809 RN7SL629P-201ENST00000489622 285 ntBASIC5.5□□□□□ -1.53
YBX1P67809 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
YBX1P67809 KCTD9P5-201ENST00000504141 1170 ntBASIC5.5□□□□□ -1.53
YBX1P67809 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
YBX1P67809 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.5□□□□□ -1.53
YBX1P67809 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.5□□□□□ -1.53
YBX1P67809 GAPDHP62-201ENST00000515313 990 ntBASIC5.5□□□□□ -1.53
YBX1P67809 RNA5SP216-201ENST00000516111 123 ntBASIC5.5□□□□□ -1.53
YBX1P67809 SNORA43.3-201ENST00000517240 103 ntBASIC5.5□□□□□ -1.53
YBX1P67809 IGLV3-24-201ENST00000517477 197 ntBASIC5.5□□□□□ -1.53
YBX1P67809 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.5□□□□□ -1.53
YBX1P67809 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.5□□□□□ -1.53
YBX1P67809 AL512310.1-201ENST00000548639 172 ntBASIC5.5□□□□□ -1.53
YBX1P67809 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC5.5□□□□□ -1.53
YBX1P67809 AL121821.2-201ENST00000556081 394 ntBASIC5.5□□□□□ -1.53
YBX1P67809 AC012182.1-201ENST00000570133 895 ntBASIC5.5□□□□□ -1.53
YBX1P67809 AC141257.3-201ENST00000572906 215 ntBASIC5.5□□□□□ -1.53
YBX1P67809 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC5.5□□□□□ -1.53
YBX1P67809 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC5.5□□□□□ -1.53
YBX1P67809 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.5□□□□□ -1.53
YBX1P67809 SS18L2P2-201ENST00000583960 235 ntBASIC5.5□□□□□ -1.53
YBX1P67809 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC5.5□□□□□ -1.53
YBX1P67809 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.5□□□□□ -1.53
YBX1P67809 AC087283.1-201ENST00000604029 1074 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms