Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.77□□□□□ -1.81
VSX2P58304 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
VSX2P58304 AC009313.2-201ENST00000417893 1941 ntBASIC3.77□□□□□ -1.81
VSX2P58304 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.77□□□□□ -1.81
VSX2P58304 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.77□□□□□ -1.81
VSX2P58304 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.77□□□□□ -1.81
VSX2P58304 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
VSX2P58304 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
VSX2P58304 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
VSX2P58304 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.76□□□□□ -1.81
VSX2P58304 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
VSX2P58304 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
VSX2P58304 AC095050.2-201ENST00000510748 1458 ntBASIC3.76□□□□□ -1.81
VSX2P58304 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
VSX2P58304 RNA5SP97-201ENST00000365006 84 ntBASIC3.76□□□□□ -1.81
VSX2P58304 RNU6-532P-201ENST00000384318 107 ntBASIC3.76□□□□□ -1.81
VSX2P58304 RNU6-146P-201ENST00000384602 108 ntBASIC3.76□□□□□ -1.81
VSX2P58304 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC3.76□□□□□ -1.81
VSX2P58304 RPL36AP36-201ENST00000418616 301 ntBASIC3.76□□□□□ -1.81
VSX2P58304 AL691447.1-201ENST00000419456 387 ntBASIC3.76□□□□□ -1.81
VSX2P58304 RFESDP1-201ENST00000422350 461 ntBASIC3.76□□□□□ -1.81
VSX2P58304 OR6K4P-201ENST00000423179 955 ntBASIC3.76□□□□□ -1.81
VSX2P58304 RPL7P28-201ENST00000437739 740 ntBASIC3.76□□□□□ -1.81
VSX2P58304 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.76□□□□□ -1.81
VSX2P58304 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.76□□□□□ -1.81
VSX2P58304 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.76□□□□□ -1.81
VSX2P58304 OR9M1P-201ENST00000459641 921 ntBASIC3.76□□□□□ -1.81
VSX2P58304 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
VSX2P58304 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC3.76□□□□□ -1.81
VSX2P58304 PCNAP1-201ENST00000505363 709 ntBASIC3.76□□□□□ -1.81
VSX2P58304 AC021146.7-201ENST00000509604 775 ntBASIC3.76□□□□□ -1.81
VSX2P58304 NPM1P41-201ENST00000512920 831 ntBASIC3.76□□□□□ -1.81
VSX2P58304 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
VSX2P58304 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC3.76□□□□□ -1.81
VSX2P58304 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC3.76□□□□□ -1.81
VSX2P58304 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.76□□□□□ -1.81
VSX2P58304 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.76□□□□□ -1.81
VSX2P58304 AC123786.2-201ENST00000603459 275 ntBASIC3.76□□□□□ -1.81
VSX2P58304 AC000123.2-201ENST00000623124 461 ntBASIC3.76□□□□□ -1.81
VSX2P58304 AC034229.5-201ENST00000624258 185 ntBASIC3.76□□□□□ -1.81
VSX2P58304 CDRT1-208ENST00000630868 794 ntBASIC3.76□□□□□ -1.81
VSX2P58304 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
VSX2P58304 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.76□□□□□ -1.81
VSX2P58304 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
VSX2P58304 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
VSX2P58304 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.76□□□□□ -1.81
VSX2P58304 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.76□□□□□ -1.81
VSX2P58304 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
VSX2P58304 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
VSX2P58304 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
VSX2P58304 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.75□□□□□ -1.81
VSX2P58304 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
VSX2P58304 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
VSX2P58304 RNA5SP322-201ENST00000363617 119 ntBASIC3.75□□□□□ -1.81
VSX2P58304 RNU6-819P-201ENST00000364116 107 ntBASIC3.75□□□□□ -1.81
VSX2P58304 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC3.75□□□□□ -1.81
VSX2P58304 RNU6-213P-201ENST00000384051 104 ntBASIC3.75□□□□□ -1.81
VSX2P58304 RNU1-89P-201ENST00000384592 164 ntBASIC3.75□□□□□ -1.81
VSX2P58304 RPL32P23-201ENST00000397237 405 ntBASIC3.75□□□□□ -1.81
VSX2P58304 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.75□□□□□ -1.81
VSX2P58304 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.75□□□□□ -1.81
VSX2P58304 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC3.75□□□□□ -1.81
VSX2P58304 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC3.75□□□□□ -1.81
VSX2P58304 ARL5AP3-201ENST00000439327 386 ntBASIC3.75□□□□□ -1.81
VSX2P58304 CLIC4P1-201ENST00000453177 535 ntBASIC3.75□□□□□ -1.81
VSX2P58304 RPL21P11-201ENST00000461458 483 ntBASIC3.75□□□□□ -1.81
VSX2P58304 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.75□□□□□ -1.81
VSX2P58304 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.75□□□□□ -1.81
VSX2P58304 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
VSX2P58304 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.75□□□□□ -1.81
VSX2P58304 RNU6-491P-201ENST00000516099 110 ntBASIC3.75□□□□□ -1.81
VSX2P58304 HMGB1P23-201ENST00000518743 568 ntBASIC3.75□□□□□ -1.81
VSX2P58304 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.75□□□□□ -1.81
VSX2P58304 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.75□□□□□ -1.81
VSX2P58304 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.75□□□□□ -1.81
VSX2P58304 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.75□□□□□ -1.81
VSX2P58304 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.75□□□□□ -1.81
VSX2P58304 YPEL5P3-201ENST00000547227 352 ntBASIC3.75□□□□□ -1.81
VSX2P58304 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.75□□□□□ -1.81
VSX2P58304 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.75□□□□□ -1.81
VSX2P58304 AC015911.5-201ENST00000587076 451 ntBASIC3.75□□□□□ -1.81
VSX2P58304 AC022387.2-201ENST00000604050 448 ntBASIC3.75□□□□□ -1.81
VSX2P58304 AC099669.2-201ENST00000616549 437 ntBASIC3.75□□□□□ -1.81
VSX2P58304 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.75□□□□□ -1.81
VSX2P58304 AC073530.2-201ENST00000623987 261 ntBASIC3.75□□□□□ -1.81
VSX2P58304 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.75□□□□□ -1.81
VSX2P58304 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.75□□□□□ -1.81
VSX2P58304 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.75□□□□□ -1.81
VSX2P58304 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
VSX2P58304 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
VSX2P58304 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
VSX2P58304 AC092079.1-201ENST00000558620 1985 ntBASIC3.74□□□□□ -1.81
VSX2P58304 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.74□□□□□ -1.81
VSX2P58304 XIAPP3-201ENST00000312918 795 ntBASIC3.74□□□□□ -1.81
VSX2P58304 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
VSX2P58304 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
VSX2P58304 SNORA48.7-201ENST00000391302 135 ntBASIC3.74□□□□□ -1.81
VSX2P58304 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.74□□□□□ -1.81
VSX2P58304 MIR1183-201ENST00000408856 89 ntBASIC3.74□□□□□ -1.81
VSX2P58304 RNU6-603P-201ENST00000411403 107 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms