Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 U3.2-201ENST00000362981 210 ntBASIC4.67□□□□□ -1.66
NR1H2P55055 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC4.67□□□□□ -1.66
NR1H2P55055 SNORA70E-201ENST00000384492 135 ntBASIC4.67□□□□□ -1.66
NR1H2P55055 RNU6-636P-201ENST00000384598 107 ntBASIC4.67□□□□□ -1.66
NR1H2P55055 TAS2R15P-201ENST00000390674 928 ntBASIC4.67□□□□□ -1.66
NR1H2P55055 MIR1250-201ENST00000408098 113 ntBASIC4.67□□□□□ -1.66
NR1H2P55055 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.67□□□□□ -1.66
NR1H2P55055 AL133384.1-201ENST00000412744 351 ntBASIC4.67□□□□□ -1.66
NR1H2P55055 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NR1H2P55055 MRPS36P1-201ENST00000421291 307 ntBASIC4.67□□□□□ -1.66
NR1H2P55055 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.67□□□□□ -1.66
NR1H2P55055 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NR1H2P55055 PSMA2P3-201ENST00000429685 675 ntBASIC4.67□□□□□ -1.66
NR1H2P55055 NANOGP2-201ENST00000435391 727 ntBASIC4.67□□□□□ -1.66
NR1H2P55055 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.67□□□□□ -1.66
NR1H2P55055 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.67□□□□□ -1.66
NR1H2P55055 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.67□□□□□ -1.66
NR1H2P55055 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.67□□□□□ -1.66
NR1H2P55055 AC146507.1-201ENST00000468335 354 ntBASIC4.67□□□□□ -1.66
NR1H2P55055 AC010301.1-201ENST00000473936 355 ntBASIC4.67□□□□□ -1.66
NR1H2P55055 RN7SL41P-201ENST00000476144 297 ntBASIC4.67□□□□□ -1.66
NR1H2P55055 AC108734.3-201ENST00000481241 1165 ntBASIC4.67□□□□□ -1.66
NR1H2P55055 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.67□□□□□ -1.66
NR1H2P55055 RN7SL97P-201ENST00000486780 299 ntBASIC4.67□□□□□ -1.66
NR1H2P55055 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC4.67□□□□□ -1.66
NR1H2P55055 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC4.67□□□□□ -1.66
NR1H2P55055 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.67□□□□□ -1.66
NR1H2P55055 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.67□□□□□ -1.66
NR1H2P55055 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.67□□□□□ -1.66
NR1H2P55055 AC087808.1-201ENST00000520501 361 ntBASIC4.67□□□□□ -1.66
NR1H2P55055 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.67□□□□□ -1.66
NR1H2P55055 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.67□□□□□ -1.66
NR1H2P55055 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC4.67□□□□□ -1.66
NR1H2P55055 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.67□□□□□ -1.66
NR1H2P55055 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.67□□□□□ -1.66
NR1H2P55055 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC4.67□□□□□ -1.66
NR1H2P55055 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.67□□□□□ -1.66
NR1H2P55055 RPL10P14-201ENST00000565265 298 ntBASIC4.67□□□□□ -1.66
NR1H2P55055 MIR4646-201ENST00000580775 63 ntBASIC4.67□□□□□ -1.66
NR1H2P55055 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NR1H2P55055 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.67□□□□□ -1.66
NR1H2P55055 AC005252.1-201ENST00000604518 1063 ntBASIC4.67□□□□□ -1.66
NR1H2P55055 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.67□□□□□ -1.66
NR1H2P55055 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC4.67□□□□□ -1.66
NR1H2P55055 MIR6820-201ENST00000611508 62 ntBASIC4.67□□□□□ -1.66
NR1H2P55055 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.67□□□□□ -1.66
NR1H2P55055 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.67□□□□□ -1.66
NR1H2P55055 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.67□□□□□ -1.66
NR1H2P55055 AC013470.4-201ENST00000619978 986 ntBASIC4.67□□□□□ -1.66
NR1H2P55055 AP002799.1-201ENST00000623552 423 ntBASIC4.67□□□□□ -1.66
NR1H2P55055 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.67□□□□□ -1.66
NR1H2P55055 MIR6715B-201ENST00000637172 77 ntBASIC4.67□□□□□ -1.66
NR1H2P55055 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NR1H2P55055 TLK1P1-201ENST00000456760 2440 ntBASIC4.67□□□□□ -1.66
NR1H2P55055 AL136964.1-201ENST00000622038 2990 ntBASIC4.67□□□□□ -1.66
NR1H2P55055 IRF5P1-201ENST00000504852 2164 ntBASIC4.67□□□□□ -1.66
NR1H2P55055 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NR1H2P55055 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.67□□□□□ -1.66
NR1H2P55055 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
NR1H2P55055 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
NR1H2P55055 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NR1H2P55055 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NR1H2P55055 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NR1H2P55055 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NR1H2P55055 NACA3P-201ENST00000359690 648 ntBASIC4.66□□□□□ -1.66
NR1H2P55055 RNU4-92P-201ENST00000363783 136 ntBASIC4.66□□□□□ -1.66
NR1H2P55055 SNORA56-201ENST00000383966 129 ntBASIC4.66□□□□□ -1.66
NR1H2P55055 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
NR1H2P55055 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.66□□□□□ -1.66
NR1H2P55055 DUTP5-201ENST00000406790 469 ntBASIC4.66□□□□□ -1.66
NR1H2P55055 U3.36-201ENST00000408418 213 ntBASIC4.66□□□□□ -1.66
NR1H2P55055 FCF1P2-201ENST00000415284 583 ntBASIC4.66□□□□□ -1.66
NR1H2P55055 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.66□□□□□ -1.66
NR1H2P55055 AC093162.1-201ENST00000419682 124 ntBASIC4.66□□□□□ -1.66
NR1H2P55055 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC4.66□□□□□ -1.66
NR1H2P55055 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.66□□□□□ -1.66
NR1H2P55055 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.66□□□□□ -1.66
NR1H2P55055 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC4.66□□□□□ -1.66
NR1H2P55055 MOB1AP1-201ENST00000430903 535 ntBASIC4.66□□□□□ -1.66
NR1H2P55055 USP9YP31-201ENST00000431405 881 ntBASIC4.66□□□□□ -1.66
NR1H2P55055 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.66□□□□□ -1.66
NR1H2P55055 AC084290.1-201ENST00000434995 374 ntBASIC4.66□□□□□ -1.66
NR1H2P55055 VN1R54P-201ENST00000435210 1049 ntBASIC4.66□□□□□ -1.66
NR1H2P55055 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC4.66□□□□□ -1.66
NR1H2P55055 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.66□□□□□ -1.66
NR1H2P55055 RNF148-202ENST00000447240 839 ntTSL 2 BASIC4.66□□□□□ -1.66
NR1H2P55055 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.66□□□□□ -1.66
NR1H2P55055 MTND1P31-201ENST00000449206 961 ntBASIC4.66□□□□□ -1.66
NR1H2P55055 AC073850.1-201ENST00000449243 255 ntBASIC4.66□□□□□ -1.66
NR1H2P55055 TPT1P13-201ENST00000449760 499 ntBASIC4.66□□□□□ -1.66
NR1H2P55055 Z92846.1-201ENST00000456203 268 ntBASIC4.66□□□□□ -1.66
NR1H2P55055 AC010307.1-201ENST00000467206 836 ntBASIC4.66□□□□□ -1.66
NR1H2P55055 AC087385.1-201ENST00000475062 312 ntBASIC4.66□□□□□ -1.66
NR1H2P55055 RN7SL441P-201ENST00000492388 296 ntBASIC4.66□□□□□ -1.66
NR1H2P55055 MTCYBP35-201ENST00000503630 1137 ntBASIC4.66□□□□□ -1.66
NR1H2P55055 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC4.66□□□□□ -1.66
NR1H2P55055 MTCO1P30-201ENST00000515244 580 ntBASIC4.66□□□□□ -1.66
NR1H2P55055 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.66□□□□□ -1.66
NR1H2P55055 MYL12AP1-201ENST00000518490 515 ntBASIC4.66□□□□□ -1.66
NR1H2P55055 AC027309.2-201ENST00000520566 192 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms