Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AC005086.4-201ENST00000623065 213 ntBASIC4.53□□□□□ -1.68
LIMK1P53667 AC093875.1-201ENST00000623688 504 ntBASIC4.53□□□□□ -1.68
LIMK1P53667 AC004777.1-201ENST00000624317 287 ntBASIC4.53□□□□□ -1.68
LIMK1P53667 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
LIMK1P53667 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LIMK1P53667 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LIMK1P53667 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
LIMK1P53667 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.53□□□□□ -1.68
LIMK1P53667 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
LIMK1P53667 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.52□□□□□ -1.69
LIMK1P53667 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.52□□□□□ -1.69
LIMK1P53667 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.52□□□□□ -1.69
LIMK1P53667 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
LIMK1P53667 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
LIMK1P53667 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LIMK1P53667 ZNF33CP-201ENST00000432492 2030 ntBASIC4.52□□□□□ -1.69
LIMK1P53667 RNU1-83P-201ENST00000363426 164 ntBASIC4.52□□□□□ -1.69
LIMK1P53667 SNORD46.1-201ENST00000364139 104 ntBASIC4.52□□□□□ -1.69
LIMK1P53667 SNORD96B-201ENST00000386148 79 ntBASIC4.52□□□□□ -1.69
LIMK1P53667 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
LIMK1P53667 RNA5SP146-201ENST00000410743 123 ntBASIC4.52□□□□□ -1.69
LIMK1P53667 PRELID3BP11-201ENST00000414230 479 ntBASIC4.52□□□□□ -1.69
LIMK1P53667 TMSB10P2-201ENST00000416049 131 ntBASIC4.52□□□□□ -1.69
LIMK1P53667 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC4.52□□□□□ -1.69
LIMK1P53667 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.52□□□□□ -1.69
LIMK1P53667 AC013262.1-201ENST00000426710 252 ntBASIC4.52□□□□□ -1.69
LIMK1P53667 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
LIMK1P53667 FO393414.1-201ENST00000428697 1184 ntBASIC4.52□□□□□ -1.69
LIMK1P53667 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.52□□□□□ -1.69
LIMK1P53667 AL451139.1-201ENST00000434718 346 ntBASIC4.52□□□□□ -1.69
LIMK1P53667 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC4.52□□□□□ -1.69
LIMK1P53667 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC4.52□□□□□ -1.69
LIMK1P53667 RPS7P5-201ENST00000441482 581 ntBASIC4.52□□□□□ -1.69
LIMK1P53667 RPL7P33-201ENST00000444159 742 ntBASIC4.52□□□□□ -1.69
LIMK1P53667 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.52□□□□□ -1.69
LIMK1P53667 MRPL48P1-201ENST00000445390 636 ntBASIC4.52□□□□□ -1.69
LIMK1P53667 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.52□□□□□ -1.69
LIMK1P53667 RPL21P71-201ENST00000465598 459 ntBASIC4.52□□□□□ -1.69
LIMK1P53667 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.52□□□□□ -1.69
LIMK1P53667 AL035404.1-201ENST00000497982 568 ntBASIC4.52□□□□□ -1.69
LIMK1P53667 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LIMK1P53667 TCP11X3P-202ENST00000514289 1254 ntBASIC4.52□□□□□ -1.69
LIMK1P53667 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.52□□□□□ -1.69
LIMK1P53667 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.52□□□□□ -1.69
LIMK1P53667 RNU1-45P-201ENST00000517191 141 ntBASIC4.52□□□□□ -1.69
LIMK1P53667 AP003102.1-201ENST00000525638 661 ntBASIC4.52□□□□□ -1.69
LIMK1P53667 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.52□□□□□ -1.69
LIMK1P53667 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.52□□□□□ -1.69
LIMK1P53667 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.52□□□□□ -1.69
LIMK1P53667 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
LIMK1P53667 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.52□□□□□ -1.69
LIMK1P53667 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.52□□□□□ -1.69
LIMK1P53667 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.52□□□□□ -1.69
LIMK1P53667 AL139286.1-201ENST00000604465 483 ntBASIC4.52□□□□□ -1.69
LIMK1P53667 AC006946.3-201ENST00000609791 756 ntBASIC4.52□□□□□ -1.69
LIMK1P53667 AC005156.1-201ENST00000613371 573 ntBASIC4.52□□□□□ -1.69
LIMK1P53667 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC4.52□□□□□ -1.69
LIMK1P53667 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.52□□□□□ -1.69
LIMK1P53667 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LIMK1P53667 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
LIMK1P53667 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.51□□□□□ -1.69
LIMK1P53667 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.51□□□□□ -1.69
LIMK1P53667 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LIMK1P53667 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LIMK1P53667 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LIMK1P53667 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LIMK1P53667 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LIMK1P53667 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LIMK1P53667 AC021146.4-201ENST00000309229 279 ntBASIC4.51□□□□□ -1.69
LIMK1P53667 RNU6-468P-201ENST00000384003 109 ntBASIC4.51□□□□□ -1.69
LIMK1P53667 U6.112-201ENST00000384129 70 ntBASIC4.51□□□□□ -1.69
LIMK1P53667 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
LIMK1P53667 DNAJC19P6-201ENST00000401853 280 ntBASIC4.51□□□□□ -1.69
LIMK1P53667 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.51□□□□□ -1.69
LIMK1P53667 HMGB3P19-201ENST00000403971 560 ntBASIC4.51□□□□□ -1.69
LIMK1P53667 HNRNPDP2-201ENST00000406475 478 ntBASIC4.51□□□□□ -1.69
LIMK1P53667 RN7SKP159-201ENST00000410657 292 ntBASIC4.51□□□□□ -1.69
LIMK1P53667 AC008280.1-201ENST00000418851 412 ntBASIC4.51□□□□□ -1.69
LIMK1P53667 AC246680.2-201ENST00000422106 389 ntBASIC4.51□□□□□ -1.69
LIMK1P53667 AC241520.1-201ENST00000422654 1099 ntBASIC4.51□□□□□ -1.69
LIMK1P53667 AC092832.1-201ENST00000422934 400 ntBASIC4.51□□□□□ -1.69
LIMK1P53667 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LIMK1P53667 AL050321.1-201ENST00000432363 400 ntBASIC4.51□□□□□ -1.69
LIMK1P53667 RPS26P2-201ENST00000440331 348 ntBASIC4.51□□□□□ -1.69
LIMK1P53667 ARL4AP3-201ENST00000441452 574 ntBASIC4.51□□□□□ -1.69
LIMK1P53667 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC4.51□□□□□ -1.69
LIMK1P53667 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.51□□□□□ -1.69
LIMK1P53667 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC4.51□□□□□ -1.69
LIMK1P53667 RPL21P103-201ENST00000479921 488 ntBASIC4.51□□□□□ -1.69
LIMK1P53667 AL132838.2-201ENST00000492041 314 ntBASIC4.51□□□□□ -1.69
LIMK1P53667 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.51□□□□□ -1.69
LIMK1P53667 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.51□□□□□ -1.69
LIMK1P53667 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
LIMK1P53667 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.51□□□□□ -1.69
LIMK1P53667 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC4.51□□□□□ -1.69
LIMK1P53667 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.51□□□□□ -1.69
LIMK1P53667 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.51□□□□□ -1.69
LIMK1P53667 AC007424.1-203ENST00000554613 687 ntBASIC4.51□□□□□ -1.69
LIMK1P53667 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
LIMK1P53667 AC095057.3-201ENST00000567102 1157 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms